RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ABCA9Q8IUA7 1624 aa20.91■□□□□ 0.94
CDK5RAP3-219ENST00000580670 ZNF644Q9H582 1327 aaPredicted RBP20.91■□□□□ 0.94
CDK5RAP3-219ENST00000580670 CDC42BPBQ9Y5S2 1711 aa20.91■□□□□ 0.94
CDK5RAP3-219ENST00000580670 CAMSAP2Q08AD1 1489 aa20.89■□□□□ 0.94
CDK5RAP3-219ENST00000580670 PLCH2O75038 1416 aa20.89■□□□□ 0.93
CDK5RAP3-219ENST00000580670 ARHGAP5Q13017 1502 aa20.89■□□□□ 0.93
CDK5RAP3-219ENST00000580670 ARAP3Q8WWN8 1544 aa20.83■□□□□ 0.93
CDK5RAP3-219ENST00000580670 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
CDK5RAP3-219ENST00000580670 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
CDK5RAP3-219ENST00000580670 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
CDK5RAP3-219ENST00000580670 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
CDK5RAP3-219ENST00000580670 DNMT1P26358 1616 aaKnown RBP20.8■□□□□ 0.92
CDK5RAP3-219ENST00000580670 DAPK1P53355 1430 aa20.8■□□□□ 0.92
CDK5RAP3-219ENST00000580670 GLI2P10070 1586 aa20.79■□□□□ 0.92
CDK5RAP3-219ENST00000580670 ABCC5O15440 1437 aa20.78■□□□□ 0.92
CDK5RAP3-219ENST00000580670 DIP2BQ9P265 1576 aa20.78■□□□□ 0.92
CDK5RAP3-219ENST00000580670 FANCAO15360 1455 aa20.78■□□□□ 0.92
CDK5RAP3-219ENST00000580670 PLEKHH2Q8IVE3 1493 aa20.78■□□□□ 0.92
CDK5RAP3-219ENST00000580670 FAM69CQ0P6D2 419 aa20.77■□□□□ 0.92
CDK5RAP3-219ENST00000580670 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.914e-8■■□□□ 12.7
CDK5RAP3-219ENST00000580670 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
CDK5RAP3-219ENST00000580670 SYCP2Q9BX26 1530 aa20.75■□□□□ 0.91
CDK5RAP3-219ENST00000580670 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
CDK5RAP3-219ENST00000580670 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
CDK5RAP3-219ENST00000580670 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
CDK5RAP3-219ENST00000580670 ARHGEF5Q12774 1597 aa20.74■□□□□ 0.91
CDK5RAP3-219ENST00000580670 ABCC1P33527 1531 aa20.73■□□□□ 0.91
CDK5RAP3-219ENST00000580670 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
CDK5RAP3-219ENST00000580670 HRCP23327 699 aa20.72■□□□□ 0.91
CDK5RAP3-219ENST00000580670 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
CDK5RAP3-219ENST00000580670 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
CDK5RAP3-219ENST00000580670 ARHGEF12Q9NZN5 1544 aa20.71■□□□□ 0.91
CDK5RAP3-219ENST00000580670 AKNAQ7Z591 1439 aa20.7■□□□□ 0.9
CDK5RAP3-219ENST00000580670 CFAP74Q9C0B2 1584 aa20.7■□□□□ 0.9
CDK5RAP3-219ENST00000580670 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
CDK5RAP3-219ENST00000580670 TSPY4P0CV99 314 aa20.69■□□□□ 0.9
CDK5RAP3-219ENST00000580670 TSPY10P0CW01 314 aa20.69■□□□□ 0.9
CDK5RAP3-219ENST00000580670 SHANK2Q9UPX8 1470 aa20.68■□□□□ 0.9
CDK5RAP3-219ENST00000580670 ADGRL1O94910 1474 aa20.68■□□□□ 0.9
CDK5RAP3-219ENST00000580670 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
CDK5RAP3-219ENST00000580670 ROCK1Q13464 1354 aa20.67■□□□□ 0.9
CDK5RAP3-219ENST00000580670 RRP7BPQ9NSQ0 103 aa20.67■□□□□ 0.9
CDK5RAP3-219ENST00000580670 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
CDK5RAP3-219ENST00000580670 C9orf84Q5VXU9 1444 aa20.67■□□□□ 0.9
CDK5RAP3-219ENST00000580670 NEO1Q92859 1461 aa20.66■□□□□ 0.9
CDK5RAP3-219ENST00000580670 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
CDK5RAP3-219ENST00000580670 NAIPQ13075 1403 aa20.65■□□□□ 0.9
CDK5RAP3-219ENST00000580670 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
CDK5RAP3-219ENST00000580670 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
CDK5RAP3-219ENST00000580670 RAB3GAP2Q9H2M9 1393 aa20.65■□□□□ 0.9
CDK5RAP3-219ENST00000580670 ADGRL2O95490 1459 aa20.64■□□□□ 0.89
CDK5RAP3-219ENST00000580670 TSPOAP1O95153 1857 aa20.63■□□□□ 0.89
CDK5RAP3-219ENST00000580670 ANKRD30AQ9BXX3 1397 aa20.63■□□□□ 0.89
CDK5RAP3-219ENST00000580670 NCOA1Q15788 1441 aa20.62■□□□□ 0.89
CDK5RAP3-219ENST00000580670 GCC2Q8IWJ2 1684 aa20.61■□□□□ 0.89
CDK5RAP3-219ENST00000580670 PPRC1Q5VV67 1664 aaKnown RBP20.6■□□□□ 0.89
CDK5RAP3-219ENST00000580670 MAST1Q9Y2H9 1570 aa20.6■□□□□ 0.89
CDK5RAP3-219ENST00000580670 AFAP1Q8N556 730 aa20.6■□□□□ 0.89
CDK5RAP3-219ENST00000580670 TEX14Q8IWB6 1497 aa20.6■□□□□ 0.89
CDK5RAP3-219ENST00000580670 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
CDK5RAP3-219ENST00000580670 ZNF518AQ6AHZ1 1483 aa20.56■□□□□ 0.88
CDK5RAP3-219ENST00000580670 POGZQ7Z3K3 1410 aa20.55■□□□□ 0.88
CDK5RAP3-219ENST00000580670 KIF15Q9NS87 1388 aa20.55■□□□□ 0.88
CDK5RAP3-219ENST00000580670 CCER1Q8TC90 406 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-219ENST00000580670 DENND4BO75064 1496 aaPredicted RBP20.54■□□□□ 0.88
CDK5RAP3-219ENST00000580670 TRHP20396 242 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-219ENST00000580670 RTEL1-TNFRSF6BF6WH68 1400 aa20.53■□□□□ 0.88
CDK5RAP3-219ENST00000580670 PLXNC1O60486 1568 aa20.53■□□□□ 0.88
CDK5RAP3-219ENST00000580670 KDM6BO15054 1643 aa20.53■□□□□ 0.88
CDK5RAP3-219ENST00000580670 ZFYVE16Q7Z3T8 1539 aa20.52■□□□□ 0.88
CDK5RAP3-219ENST00000580670 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
CDK5RAP3-219ENST00000580670 INO80Q9ULG1 1556 aaPredicted RBP20.5■□□□□ 0.87
CDK5RAP3-219ENST00000580670 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
CDK5RAP3-219ENST00000580670 KDM5CP41229 1560 aa20.5■□□□□ 0.87
CDK5RAP3-219ENST00000580670 ANKRD50Q9ULJ7 1429 aa20.5■□□□□ 0.87
CDK5RAP3-219ENST00000580670 RAPGEF3O95398 923 aa20.49■□□□□ 0.87
CDK5RAP3-219ENST00000580670 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
CDK5RAP3-219ENST00000580670 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
CDK5RAP3-219ENST00000580670 DUOX2Q9NRD8 1548 aa20.45■□□□□ 0.87
CDK5RAP3-219ENST00000580670 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
CDK5RAP3-219ENST00000580670 KIDINS220Q9ULH0 1771 aa20.45■□□□□ 0.86
CDK5RAP3-219ENST00000580670 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
CDK5RAP3-219ENST00000580670 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
CDK5RAP3-219ENST00000580670 ACIN1Q9UKV3 1341 aaKnown RBP20.44■□□□□ 0.86
CDK5RAP3-219ENST00000580670 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
CDK5RAP3-219ENST00000580670 ERBINQ96RT1 1412 aa20.41■□□□□ 0.86
CDK5RAP3-219ENST00000580670 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
CDK5RAP3-219ENST00000580670 ZMYM4Q5VZL5 1548 aa20.38■□□□□ 0.85
CDK5RAP3-219ENST00000580670 ABCA6Q8N139 1617 aa20.36■□□□□ 0.85
CDK5RAP3-219ENST00000580670 DHX29Q7Z478 1369 aaKnown RBP20.36■□□□□ 0.85
CDK5RAP3-219ENST00000580670 A2MP01023 1474 aa20.35■□□□□ 0.85
CDK5RAP3-219ENST00000580670 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
CDK5RAP3-219ENST00000580670 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
CDK5RAP3-219ENST00000580670 MAGI2Q86UL8 1455 aa20.33■□□□□ 0.85
CDK5RAP3-219ENST00000580670 DIP2CQ9Y2E4 1556 aa20.33■□□□□ 0.85
CDK5RAP3-219ENST00000580670 NUP155O75694 1391 aa20.33■□□□□ 0.84
CDK5RAP3-219ENST00000580670 MPHOSPH9Q99550 1183 aa20.33■□□□□ 0.84
CDK5RAP3-219ENST00000580670 UNC13BO14795 1591 aa20.31■□□□□ 0.84
CDK5RAP3-219ENST00000580670 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
CDK5RAP3-219ENST00000580670 PZPP20742 1482 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms