RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
ITGB4-206ENST00000579662 ROCK2O75116 1388 aaKnown RBP19.64■□□□□ 0.73
ITGB4-206ENST00000579662 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.73
ITGB4-206ENST00000579662 TRHP20396 242 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-206ENST00000579662 FRAT1Q92837 279 aaPredicted RBP19.63■□□□□ 0.73
ITGB4-206ENST00000579662 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
ITGB4-206ENST00000579662 HDGFL2Q7Z4V5 671 aaPredicted RBP19.62■□□□□ 0.73
ITGB4-206ENST00000579662 ARXQ96QS3 562 aa19.59■□□□□ 0.73
ITGB4-206ENST00000579662 RALBP1Q15311 655 aa19.58■□□□□ 0.73
ITGB4-206ENST00000579662 FOXD1Q16676 465 aa19.57■□□□□ 0.72
ITGB4-206ENST00000579662 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
ITGB4-206ENST00000579662 SPAG9O60271 1321 aaKnown RBP19.54■□□□□ 0.72
ITGB4-206ENST00000579662 SAFB2Q14151 953 aaKnown RBP eCLIP19.52■□□□□ 0.72
ITGB4-206ENST00000579662 KIF3BO15066 747 aa19.52■□□□□ 0.71
ITGB4-206ENST00000579662 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.71
ITGB4-206ENST00000579662 RGS3P49796 1198 aa19.51■□□□□ 0.71
ITGB4-206ENST00000579662 STK26Q9P289 416 aa19.51■□□□□ 0.71
ITGB4-206ENST00000579662 OS9Q13438 667 aaPredicted RBP19.51■□□□□ 0.71
ITGB4-206ENST00000579662 CALD1Q05682 793 aaKnown RBP19.5■□□□□ 0.71
ITGB4-206ENST00000579662 CDK11BP21127 795 aaKnown RBP19.5■□□□□ 0.71
ITGB4-206ENST00000579662 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
ITGB4-206ENST00000579662 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
ITGB4-206ENST00000579662 ZRSR1Q15695 479 aaKnown RBP19.47■□□□□ 0.71
ITGB4-206ENST00000579662 TRIM44Q96DX7 344 aaPredicted RBP19.47■□□□□ 0.71
ITGB4-206ENST00000579662 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
ITGB4-206ENST00000579662 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
ITGB4-206ENST00000579662 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
ITGB4-206ENST00000579662 PTPRGP23470 1445 aa19.43■□□□□ 0.7
ITGB4-206ENST00000579662 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
ITGB4-206ENST00000579662 SOX12O15370 315 aa19.42■□□□□ 0.7
ITGB4-206ENST00000579662 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
ITGB4-206ENST00000579662 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
ITGB4-206ENST00000579662 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
ITGB4-206ENST00000579662 NPHP1O15259 732 aa19.42■□□□□ 0.7
ITGB4-206ENST00000579662 GLIPR1L2Q4G1C9 344 aa19.42■□□□□ 0.7
ITGB4-206ENST00000579662 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
ITGB4-206ENST00000579662 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
ITGB4-206ENST00000579662 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
ITGB4-206ENST00000579662 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
ITGB4-206ENST00000579662 HSP90AB1P08238 724 aaKnown RBP19.39■□□□□ 0.7
ITGB4-206ENST00000579662 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.7
ITGB4-206ENST00000579662 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.7
ITGB4-206ENST00000579662 EID1Q9Y6B2 187 aa19.39■□□□□ 0.69
ITGB4-206ENST00000579662 CCDC144AA2RUR9 1427 aa19.38■□□□□ 0.69
ITGB4-206ENST00000579662 PHLDB1Q86UU1 1377 aa19.37■□□□□ 0.69
ITGB4-206ENST00000579662 KCNJ4P48050 445 aa19.37■□□□□ 0.69
ITGB4-206ENST00000579662 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
ITGB4-206ENST00000579662 NCAPD3P42695 1498 aa19.37■□□□□ 0.69
ITGB4-206ENST00000579662 MCCP23508 829 aa19.36■□□□□ 0.69
ITGB4-206ENST00000579662 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
ITGB4-206ENST00000579662 FGD1P98174 961 aa19.35■□□□□ 0.69
ITGB4-206ENST00000579662 HSCBQ8IWL3 235 aa19.34■□□□□ 0.69
ITGB4-206ENST00000579662 GOLGA2Q08379 1002 aa19.34■□□□□ 0.69
ITGB4-206ENST00000579662 IGF1RP08069 1367 aa19.34■□□□□ 0.69
ITGB4-206ENST00000579662 PTMAP06454 111 aaKnown RBP19.33■□□□□ 0.69
ITGB4-206ENST00000579662 NLRP13Q86W25 1043 aa19.33■□□□□ 0.69
ITGB4-206ENST00000579662 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
ITGB4-206ENST00000579662 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.69
ITGB4-206ENST00000579662 CUX1P39880 1505 aa19.32■□□□□ 0.68
ITGB4-206ENST00000579662 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
ITGB4-206ENST00000579662 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
ITGB4-206ENST00000579662 RWDD1Q9H446 243 aaPredicted RBP19.3■□□□□ 0.68
ITGB4-206ENST00000579662 MYOM3Q5VTT5 1437 aa19.28■□□□□ 0.68
ITGB4-206ENST00000579662 LMOD3Q0VAK6 560 aa19.28■□□□□ 0.68
ITGB4-206ENST00000579662 CSB-PGBD3P0DP91 1061 aa19.27■□□□□ 0.68
ITGB4-206ENST00000579662 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
ITGB4-206ENST00000579662 PMFBP1Q8TBY8 1022 aa19.25■□□□□ 0.67
ITGB4-206ENST00000579662 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
ITGB4-206ENST00000579662 HDAC5Q9UQL6 1122 aa19.24■□□□□ 0.67
ITGB4-206ENST00000579662 MYBBP1AQ9BQG0 1328 aaKnown RBP19.24■□□□□ 0.67
ITGB4-206ENST00000579662 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
ITGB4-206ENST00000579662 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
ITGB4-206ENST00000579662 GOLGA6L6A8MZA4 724 aa19.23■□□□□ 0.67
ITGB4-206ENST00000579662 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
ITGB4-206ENST00000579662 NGDNQ8NEJ9 315 aaKnown RBP19.22■□□□□ 0.67
ITGB4-206ENST00000579662 TCERG1O14776 1098 aaKnown RBP19.22■□□□□ 0.67
ITGB4-206ENST00000579662 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
ITGB4-206ENST00000579662 FGD6Q6ZV73 1430 aa19.2■□□□□ 0.66
ITGB4-206ENST00000579662 TRAK1Q9UPV9 953 aa19.19■□□□□ 0.66
ITGB4-206ENST00000579662 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
ITGB4-206ENST00000579662 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
ITGB4-206ENST00000579662 GOLGA6L4A6NEF3 574 aa19.19■□□□□ 0.66
ITGB4-206ENST00000579662 TPRNQ4KMQ1 711 aa19.19■□□□□ 0.66
ITGB4-206ENST00000579662 SMC4Q9NTJ3 1288 aa19.19■□□□□ 0.66
ITGB4-206ENST00000579662 KIAA1211Q6ZU35 1233 aa19.19■□□□□ 0.66
ITGB4-206ENST00000579662 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
ITGB4-206ENST00000579662 CENPJQ9HC77 1338 aaPredicted RBP19.17■□□□□ 0.66
ITGB4-206ENST00000579662 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
ITGB4-206ENST00000579662 KIF21BO75037 1637 aa19.17■□□□□ 0.66
ITGB4-206ENST00000579662 HMMRO75330 724 aa19.17■□□□□ 0.66
ITGB4-206ENST00000579662 USP47Q96K76 1375 aa19.16■□□□□ 0.66
ITGB4-206ENST00000579662 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
ITGB4-206ENST00000579662 AMPHP49418 695 aa19.16■□□□□ 0.66
ITGB4-206ENST00000579662 STAC3Q96MF2 364 aa19.16■□□□□ 0.66
ITGB4-206ENST00000579662 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
ITGB4-206ENST00000579662 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
ITGB4-206ENST00000579662 DNTTIP2Q5QJE6 756 aaKnown RBP19.15■□□□□ 0.66
ITGB4-206ENST00000579662 PTMSP20962 102 aa19.15■□□□□ 0.66
ITGB4-206ENST00000579662 NRDCO43847 1150 aa19.15■□□□□ 0.66
ITGB4-206ENST00000579662 PANK3Q9H999 370 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms