RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 LRRC9Q6ZRR7 1453 aa26.69■■□□□ 1.86
CBX3P2-201ENST00000579647 CCNB3Q8WWL7 1395 aa26.69■■□□□ 1.86
CBX3P2-201ENST00000579647 CDC42BPBQ9Y5S2 1711 aa26.68■■□□□ 1.86
CBX3P2-201ENST00000579647 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
CBX3P2-201ENST00000579647 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
CBX3P2-201ENST00000579647 ZNF777Q9ULD5 760 aaPredicted RBP26.65■■□□□ 1.86
CBX3P2-201ENST00000579647 SCAPERQ9BY12 1400 aa26.65■■□□□ 1.86
CBX3P2-201ENST00000579647 PREX2Q70Z35 1606 aa26.65■■□□□ 1.86
CBX3P2-201ENST00000579647 DENND4BO75064 1496 aaPredicted RBP26.64■■□□□ 1.86
CBX3P2-201ENST00000579647 ADGRL1O94910 1474 aa26.64■■□□□ 1.86
CBX3P2-201ENST00000579647 CFDP1Q9UEE9 299 aaPredicted RBP26.64■■□□□ 1.85
CBX3P2-201ENST00000579647 NCOA2Q15596 1464 aa26.63■■□□□ 1.85
CBX3P2-201ENST00000579647 SUPT6HQ7KZ85 1726 aaKnown RBP26.62■■□□□ 1.85
CBX3P2-201ENST00000579647 FRMPD1Q5SYB0 1578 aa26.57■■□□□ 1.84
CBX3P2-201ENST00000579647 AFAP1Q8N556 730 aa26.55■■□□□ 1.84
CBX3P2-201ENST00000579647 RICTORQ6R327 1708 aa26.54■■□□□ 1.84
CBX3P2-201ENST00000579647 ZNF644Q9H582 1327 aaPredicted RBP26.53■■□□□ 1.84
CBX3P2-201ENST00000579647 POGZQ7Z3K3 1410 aa26.52■■□□□ 1.84
CBX3P2-201ENST00000579647 HNRNPMP52272 730 aaKnown RBP eCLIP26.52■■□□□ 1.84
CBX3P2-201ENST00000579647 ARHGEF12Q9NZN5 1544 aa26.52■■□□□ 1.84
CBX3P2-201ENST00000579647 SAMD9LQ8IVG5 1584 aa26.51■■□□□ 1.83
CBX3P2-201ENST00000579647 ITSN2Q9NZM3 1697 aa26.51■■□□□ 1.83
CBX3P2-201ENST00000579647 ABCC1P33527 1531 aa26.5■■□□□ 1.83
CBX3P2-201ENST00000579647 TRAPPC8Q9Y2L5 1435 aa26.48■■□□□ 1.83
CBX3P2-201ENST00000579647 MYT1LQ9UL68 1186 aa26.47■■□□□ 1.83
CBX3P2-201ENST00000579647 PPARGC1BQ86YN6 1023 aaKnown RBP26.46■■□□□ 1.83
CBX3P2-201ENST00000579647 ZNF518AQ6AHZ1 1483 aa26.45■■□□□ 1.82
CBX3P2-201ENST00000579647 ZMYM4Q5VZL5 1548 aa26.44■■□□□ 1.82
CBX3P2-201ENST00000579647 SYCP2Q9BX26 1530 aa26.44■■□□□ 1.82
CBX3P2-201ENST00000579647 PLEKHH2Q8IVE3 1493 aa26.44■■□□□ 1.82
CBX3P2-201ENST00000579647 KIAA1107Q9UPP5 1409 aa26.43■■□□□ 1.82
CBX3P2-201ENST00000579647 MYOM3Q5VTT5 1437 aa26.42■■□□□ 1.82
CBX3P2-201ENST00000579647 YEATS2Q9ULM3 1422 aa26.42■■□□□ 1.82
CBX3P2-201ENST00000579647 MAGI2Q86UL8 1455 aa26.4■■□□□ 1.82
CBX3P2-201ENST00000579647 ZFYVE16Q7Z3T8 1539 aa26.39■■□□□ 1.82
CBX3P2-201ENST00000579647 KDM5CP41229 1560 aa26.38■■□□□ 1.81
CBX3P2-201ENST00000579647 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
CBX3P2-201ENST00000579647 MIA2Q96PC5 1412 aa26.35■■□□□ 1.81
CBX3P2-201ENST00000579647 ARHGEF40Q8TER5 1519 aa26.35■■□□□ 1.81
CBX3P2-201ENST00000579647 MBD5Q9P267 1494 aa26.35■■□□□ 1.81
CBX3P2-201ENST00000579647 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
CBX3P2-201ENST00000579647 KDM4FA0A1W2PPD8 638 aa26.34■■□□□ 1.81
CBX3P2-201ENST00000579647 ARID4BQ4LE39 1312 aaPredicted RBP26.34■■□□□ 1.81
CBX3P2-201ENST00000579647 MLH3Q9UHC1 1453 aa26.33■■□□□ 1.81
CBX3P2-201ENST00000579647 HECW2Q9P2P5 1572 aa26.32■■□□□ 1.8
CBX3P2-201ENST00000579647 ATP10AO60312 1499 aa26.3■■□□□ 1.8
CBX3P2-201ENST00000579647 RSPH4AQ5TD94 716 aa26.3■■□□□ 1.8
CBX3P2-201ENST00000579647 FGD6Q6ZV73 1430 aa26.27■■□□□ 1.8
CBX3P2-201ENST00000579647 KIDINS220Q9ULH0 1771 aa26.27■■□□□ 1.8
CBX3P2-201ENST00000579647 CCDC141Q6ZP82 1450 aa26.25■■□□□ 1.79
CBX3P2-201ENST00000579647 DIP2CQ9Y2E4 1556 aa26.25■■□□□ 1.79
CBX3P2-201ENST00000579647 PTPN23Q9H3S7 1636 aa26.25■■□□□ 1.79
CBX3P2-201ENST00000579647 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
CBX3P2-201ENST00000579647 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
CBX3P2-201ENST00000579647 C9orf84Q5VXU9 1444 aa26.24■■□□□ 1.79
CBX3P2-201ENST00000579647 ABCA6Q8N139 1617 aa26.24■■□□□ 1.79
CBX3P2-201ENST00000579647 AEBP2Q6ZN18 517 aaPredicted RBP26.22■■□□□ 1.79
CBX3P2-201ENST00000579647 ARHGEF5Q12774 1597 aa26.22■■□□□ 1.79
CBX3P2-201ENST00000579647 ATP7AQ04656 1500 aa26.22■■□□□ 1.79
CBX3P2-201ENST00000579647 MLECQ14165 292 aa26.22■■□□□ 1.79
CBX3P2-201ENST00000579647 SIGLEC1Q9BZZ2 1709 aa26.22■■□□□ 1.79
CBX3P2-201ENST00000579647 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
CBX3P2-201ENST00000579647 INO80Q9ULG1 1556 aaPredicted RBP26.19■■□□□ 1.78
CBX3P2-201ENST00000579647 TCOF1Q13428 1488 aaKnown RBP26.19■■□□□ 1.78
CBX3P2-201ENST00000579647 RTEL1-TNFRSF6BF6WH68 1400 aa26.18■■□□□ 1.78
CBX3P2-201ENST00000579647 BCORL1Q5H9F3 1711 aa26.15■■□□□ 1.78
CBX3P2-201ENST00000579647 ABCC5O15440 1437 aa26.13■■□□□ 1.77
CBX3P2-201ENST00000579647 REREQ9P2R6 1566 aa26.13■■□□□ 1.77
CBX3P2-201ENST00000579647 A2MP01023 1474 aa26.11■■□□□ 1.77
CBX3P2-201ENST00000579647 ADAMTSL3P82987 1691 aa26.1■■□□□ 1.77
CBX3P2-201ENST00000579647 DAPK1P53355 1430 aa26.1■■□□□ 1.77
CBX3P2-201ENST00000579647 CHIC2Q9UKJ5 165 aa26.08■■□□□ 1.77
CBX3P2-201ENST00000579647 AGLP35573 1532 aa26.08■■□□□ 1.77
CBX3P2-201ENST00000579647 MAST1Q9Y2H9 1570 aa26.08■■□□□ 1.76
CBX3P2-201ENST00000579647 DNMT1P26358 1616 aaKnown RBP26.07■■□□□ 1.76
CBX3P2-201ENST00000579647 ADGBQ8N7X0 1667 aa26.06■■□□□ 1.76
CBX3P2-201ENST00000579647 DHX29Q7Z478 1369 aaKnown RBP26.06■■□□□ 1.76
CBX3P2-201ENST00000579647 MADDQ8WXG6 1647 aa26.05■■□□□ 1.76
CBX3P2-201ENST00000579647 RRP7BPQ9NSQ0 103 aa26.03■■□□□ 1.76
CBX3P2-201ENST00000579647 GGT6Q6P531 493 aa26.02■■□□□ 1.76
CBX3P2-201ENST00000579647 PLXNC1O60486 1568 aa26.02■■□□□ 1.76
CBX3P2-201ENST00000579647 CROCC2H7BZ55 1655 aa26.02■■□□□ 1.76
CBX3P2-201ENST00000579647 ITGAEP38570 1179 aa26.01■■□□□ 1.75
CBX3P2-201ENST00000579647 SHANK2Q9UPX8 1470 aa26.01■■□□□ 1.75
CBX3P2-201ENST00000579647 KIF3BO15066 747 aa26■■□□□ 1.75
CBX3P2-201ENST00000579647 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
CBX3P2-201ENST00000579647 RIMS1Q86UR5 1692 aaKnown RBP25.98■■□□□ 1.75
CBX3P2-201ENST00000579647 PTPRMP28827 1452 aa25.98■■□□□ 1.75
CBX3P2-201ENST00000579647 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
CBX3P2-201ENST00000579647 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
CBX3P2-201ENST00000579647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.96■■□□□ 1.75
CBX3P2-201ENST00000579647 FER1L4A9Z1Z3 1794 aa25.96■■□□□ 1.75
CBX3P2-201ENST00000579647 ANKRD30AQ9BXX3 1397 aa25.95■■□□□ 1.75
CBX3P2-201ENST00000579647 KIF15Q9NS87 1388 aa25.95■■□□□ 1.75
CBX3P2-201ENST00000579647 PTPRKQ15262 1439 aa25.95■■□□□ 1.74
CBX3P2-201ENST00000579647 NCOA1Q15788 1441 aa25.92■■□□□ 1.74
CBX3P2-201ENST00000579647 DUOX2Q9NRD8 1548 aa25.91■■□□□ 1.74
CBX3P2-201ENST00000579647 CEBPAP49715 358 aaPredicted RBP25.91■■□□□ 1.74
CBX3P2-201ENST00000579647 ADGRL2O95490 1459 aa25.88■■□□□ 1.73
CBX3P2-201ENST00000579647 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms