RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
PPP4R1-211ENST00000578875 ZFYVE16Q7Z3T8 1539 aa14.07□□□□□ -0.16
PPP4R1-211ENST00000578875 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
PPP4R1-211ENST00000578875 GOLGA3Q08378 1498 aa14.06□□□□□ -0.16
PPP4R1-211ENST00000578875 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
PPP4R1-211ENST00000578875 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
PPP4R1-211ENST00000578875 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
PPP4R1-211ENST00000578875 ATP10AO60312 1499 aa14.02□□□□□ -0.16
PPP4R1-211ENST00000578875 SENP3Q9H4L4 574 aaPredicted RBP14.02□□□□□ -0.17
PPP4R1-211ENST00000578875 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
PPP4R1-211ENST00000578875 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
PPP4R1-211ENST00000578875 EFCAB5A4FU69 1503 aa14□□□□□ -0.17
PPP4R1-211ENST00000578875 ZMYM4Q5VZL5 1548 aa14□□□□□ -0.17
PPP4R1-211ENST00000578875 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
PPP4R1-211ENST00000578875 PLEKHD1A6NEE1 506 aa14□□□□□ -0.17
PPP4R1-211ENST00000578875 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
PPP4R1-211ENST00000578875 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
PPP4R1-211ENST00000578875 AFAP1Q8N556 730 aa13.96□□□□□ -0.17
PPP4R1-211ENST00000578875 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.18
PPP4R1-211ENST00000578875 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.18
PPP4R1-211ENST00000578875 CTTNBP2Q8WZ74 1663 aa13.94□□□□□ -0.18
PPP4R1-211ENST00000578875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PPP4R1-211ENST00000578875 TOM1O60784 492 aa13.93□□□□□ -0.18
PPP4R1-211ENST00000578875 CAMSAP1Q5T5Y3 1602 aa13.93□□□□□ -0.18
PPP4R1-211ENST00000578875 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
PPP4R1-211ENST00000578875 MYT1LQ9UL68 1186 aa13.92□□□□□ -0.18
PPP4R1-211ENST00000578875 NUP153P49790 1475 aaKnown RBP13.92□□□□□ -0.18
PPP4R1-211ENST00000578875 C3P01024 1663 aa13.91□□□□□ -0.18
PPP4R1-211ENST00000578875 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
PPP4R1-211ENST00000578875 RAPGEF6Q8TEU7 1601 aa13.89□□□□□ -0.19
PPP4R1-211ENST00000578875 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
PPP4R1-211ENST00000578875 PLCH2O75038 1416 aa13.87□□□□□ -0.19
PPP4R1-211ENST00000578875 PKD2Q13563 968 aa13.86□□□□□ -0.19
PPP4R1-211ENST00000578875 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
PPP4R1-211ENST00000578875 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
PPP4R1-211ENST00000578875 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
PPP4R1-211ENST00000578875 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
PPP4R1-211ENST00000578875 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
PPP4R1-211ENST00000578875 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
PPP4R1-211ENST00000578875 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-211ENST00000578875 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
PPP4R1-211ENST00000578875 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
PPP4R1-211ENST00000578875 PLA2R1Q13018 1463 aa13.74□□□□□ -0.21
PPP4R1-211ENST00000578875 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
PPP4R1-211ENST00000578875 NPATQ14207 1427 aa13.74□□□□□ -0.21
PPP4R1-211ENST00000578875 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
PPP4R1-211ENST00000578875 AGLP35573 1532 aa13.73□□□□□ -0.21
PPP4R1-211ENST00000578875 CDK13Q14004 1512 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-211ENST00000578875 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
PPP4R1-211ENST00000578875 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
PPP4R1-211ENST00000578875 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
PPP4R1-211ENST00000578875 KDM5CP41229 1560 aa13.71□□□□□ -0.21
PPP4R1-211ENST00000578875 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
PPP4R1-211ENST00000578875 CPS1P31327 1500 aa13.69□□□□□ -0.22
PPP4R1-211ENST00000578875 MLH3Q9UHC1 1453 aa13.69□□□□□ -0.22
PPP4R1-211ENST00000578875 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
PPP4R1-211ENST00000578875 REREQ9P2R6 1566 aa13.69□□□□□ -0.22
PPP4R1-211ENST00000578875 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
PPP4R1-211ENST00000578875 GGT6Q6P531 493 aa13.66□□□□□ -0.22
PPP4R1-211ENST00000578875 MYO3AQ8NEV4 1616 aa13.65□□□□□ -0.22
PPP4R1-211ENST00000578875 SETD1AO15047 1707 aaKnown RBP13.65□□□□□ -0.22
PPP4R1-211ENST00000578875 FBXO31Q5XUX0 539 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-211ENST00000578875 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
PPP4R1-211ENST00000578875 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-211ENST00000578875 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
PPP4R1-211ENST00000578875 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
PPP4R1-211ENST00000578875 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
PPP4R1-211ENST00000578875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.231e-18■■■■□ 20.3
PPP4R1-211ENST00000578875 ANKLE2Q86XL3 938 aa13.62□□□□□ -0.23
PPP4R1-211ENST00000578875 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
PPP4R1-211ENST00000578875 KIF14Q15058 1648 aa13.61□□□□□ -0.23
PPP4R1-211ENST00000578875 ZNF142P52746 1687 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-211ENST00000578875 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
PPP4R1-211ENST00000578875 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
PPP4R1-211ENST00000578875 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
PPP4R1-211ENST00000578875 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
PPP4R1-211ENST00000578875 CLTCQ00610 1675 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-211ENST00000578875 MROH2AA6NES4 1674 aa13.59□□□□□ -0.23
PPP4R1-211ENST00000578875 TRIM52Q96A61 297 aa13.58□□□□□ -0.24
PPP4R1-211ENST00000578875 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.244e-6■■■■□ 23.6
PPP4R1-211ENST00000578875 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
PPP4R1-211ENST00000578875 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
PPP4R1-211ENST00000578875 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
PPP4R1-211ENST00000578875 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
PPP4R1-211ENST00000578875 CDC42BPBQ9Y5S2 1711 aa13.54□□□□□ -0.24
PPP4R1-211ENST00000578875 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
PPP4R1-211ENST00000578875 SPAG9O60271 1321 aaKnown RBP13.54□□□□□ -0.24
PPP4R1-211ENST00000578875 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
PPP4R1-211ENST00000578875 ABCC1P33527 1531 aa13.51□□□□□ -0.25
PPP4R1-211ENST00000578875 TNRQ92752 1358 aa13.51□□□□□ -0.25
PPP4R1-211ENST00000578875 SRCAPQ6ZRS2 3230 aa13.51□□□□□ -0.25
PPP4R1-211ENST00000578875 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-211ENST00000578875 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
PPP4R1-211ENST00000578875 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-211ENST00000578875 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
PPP4R1-211ENST00000578875 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
PPP4R1-211ENST00000578875 MED14O60244 1454 aa13.48□□□□□ -0.25
PPP4R1-211ENST00000578875 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
PPP4R1-211ENST00000578875 A2MP01023 1474 aa13.48□□□□□ -0.25
PPP4R1-211ENST00000578875 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms