RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
CTC1-203ENST00000578240 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
CTC1-203ENST00000578240 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
CTC1-203ENST00000578240 GCC2Q8IWJ2 1684 aa19.93■□□□□ 0.78
CTC1-203ENST00000578240 KIF13AQ9H1H9 1805 aa19.93■□□□□ 0.78
CTC1-203ENST00000578240 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
CTC1-203ENST00000578240 ADGBQ8N7X0 1667 aa19.92■□□□□ 0.78
CTC1-203ENST00000578240 ARAP3Q8WWN8 1544 aa19.89■□□□□ 0.77
CTC1-203ENST00000578240 ZNF644Q9H582 1327 aaPredicted RBP19.87■□□□□ 0.77
CTC1-203ENST00000578240 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
CTC1-203ENST00000578240 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
CTC1-203ENST00000578240 DAPK1P53355 1430 aa19.86■□□□□ 0.77
CTC1-203ENST00000578240 DIP2BQ9P265 1576 aa19.85■□□□□ 0.77
CTC1-203ENST00000578240 FAM69CQ0P6D2 419 aa19.85■□□□□ 0.77
CTC1-203ENST00000578240 ITGAEP38570 1179 aa19.84■□□□□ 0.77
CTC1-203ENST00000578240 SYCP2Q9BX26 1530 aa19.84■□□□□ 0.77
CTC1-203ENST00000578240 ABCC5O15440 1437 aa19.83■□□□□ 0.77
CTC1-203ENST00000578240 ABCC1P33527 1531 aa19.83■□□□□ 0.77
CTC1-203ENST00000578240 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.76
CTC1-203ENST00000578240 PLCH2O75038 1416 aa19.83■□□□□ 0.76
CTC1-203ENST00000578240 CFDP1Q9UEE9 299 aaPredicted RBP19.82■□□□□ 0.76
CTC1-203ENST00000578240 KCNH8Q96L42 1107 aa19.81■□□□□ 0.76
CTC1-203ENST00000578240 MBD5Q9P267 1494 aa19.81■□□□□ 0.76
CTC1-203ENST00000578240 KDM6BO15054 1643 aa19.8■□□□□ 0.76
CTC1-203ENST00000578240 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
CTC1-203ENST00000578240 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
CTC1-203ENST00000578240 SHANK2Q9UPX8 1470 aa19.79■□□□□ 0.76
CTC1-203ENST00000578240 ARHGEF12Q9NZN5 1544 aa19.78■□□□□ 0.76
CTC1-203ENST00000578240 GLI2P10070 1586 aa19.77■□□□□ 0.76
CTC1-203ENST00000578240 NAIPQ13075 1403 aa19.76■□□□□ 0.75
CTC1-203ENST00000578240 ADGRL2O95490 1459 aa19.76■□□□□ 0.75
CTC1-203ENST00000578240 PPRC1Q5VV67 1664 aaKnown RBP19.76■□□□□ 0.75
CTC1-203ENST00000578240 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
CTC1-203ENST00000578240 MAST1Q9Y2H9 1570 aa19.76■□□□□ 0.75
CTC1-203ENST00000578240 SETD5Q9C0A6 1442 aa19.75■□□□□ 0.75
CTC1-203ENST00000578240 CFAP74Q9C0B2 1584 aa19.74■□□□□ 0.75
CTC1-203ENST00000578240 CCDC141Q6ZP82 1450 aa19.74■□□□□ 0.75
CTC1-203ENST00000578240 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
CTC1-203ENST00000578240 FANCAO15360 1455 aa19.73■□□□□ 0.75
CTC1-203ENST00000578240 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
CTC1-203ENST00000578240 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
CTC1-203ENST00000578240 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
CTC1-203ENST00000578240 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
CTC1-203ENST00000578240 PLXNC1O60486 1568 aa19.7■□□□□ 0.74
CTC1-203ENST00000578240 C9orf84Q5VXU9 1444 aa19.68■□□□□ 0.74
CTC1-203ENST00000578240 INO80Q9ULG1 1556 aaPredicted RBP19.68■□□□□ 0.74
CTC1-203ENST00000578240 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
CTC1-203ENST00000578240 CHIC2Q9UKJ5 165 aa19.66■□□□□ 0.74
CTC1-203ENST00000578240 NCOA1Q15788 1441 aa19.66■□□□□ 0.74
CTC1-203ENST00000578240 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
CTC1-203ENST00000578240 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
CTC1-203ENST00000578240 HRCP23327 699 aa19.65■□□□□ 0.74
CTC1-203ENST00000578240 TRAPPC8Q9Y2L5 1435 aa19.64■□□□□ 0.73
CTC1-203ENST00000578240 HNRNPMP52272 730 aaKnown RBP eCLIP19.64■□□□□ 0.73
CTC1-203ENST00000578240 RICTORQ6R327 1708 aa19.64■□□□□ 0.73
CTC1-203ENST00000578240 ADGRL1O94910 1474 aa19.63■□□□□ 0.73
CTC1-203ENST00000578240 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
CTC1-203ENST00000578240 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
CTC1-203ENST00000578240 KIDINS220Q9ULH0 1771 aa19.61■□□□□ 0.73
CTC1-203ENST00000578240 KDM5CP41229 1560 aa19.61■□□□□ 0.73
CTC1-203ENST00000578240 NEO1Q92859 1461 aa19.59■□□□□ 0.73
CTC1-203ENST00000578240 CCER1Q8TC90 406 aaPredicted RBP19.58■□□□□ 0.72
CTC1-203ENST00000578240 FRMPD1Q5SYB0 1578 aa19.58■□□□□ 0.72
CTC1-203ENST00000578240 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
CTC1-203ENST00000578240 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
CTC1-203ENST00000578240 DENND4BO75064 1496 aaPredicted RBP19.56■□□□□ 0.72
CTC1-203ENST00000578240 TEX14Q8IWB6 1497 aa19.55■□□□□ 0.72
CTC1-203ENST00000578240 SCAPERQ9BY12 1400 aa19.55■□□□□ 0.72
CTC1-203ENST00000578240 UNC13BO14795 1591 aa19.54■□□□□ 0.72
CTC1-203ENST00000578240 POGZQ7Z3K3 1410 aa19.54■□□□□ 0.72
CTC1-203ENST00000578240 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
CTC1-203ENST00000578240 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
CTC1-203ENST00000578240 KIF15Q9NS87 1388 aa19.53■□□□□ 0.72
CTC1-203ENST00000578240 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
CTC1-203ENST00000578240 ZNF518AQ6AHZ1 1483 aa19.52■□□□□ 0.72
CTC1-203ENST00000578240 ABCA6Q8N139 1617 aa19.51■□□□□ 0.71
CTC1-203ENST00000578240 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
CTC1-203ENST00000578240 KDM5DQ9BY66 1539 aa19.5■□□□□ 0.71
CTC1-203ENST00000578240 DUOX2Q9NRD8 1548 aa19.5■□□□□ 0.71
CTC1-203ENST00000578240 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
CTC1-203ENST00000578240 DEPDC5O75140 1603 aa19.48■□□□□ 0.71
CTC1-203ENST00000578240 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
CTC1-203ENST00000578240 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
CTC1-203ENST00000578240 AFAP1Q8N556 730 aa19.47■□□□□ 0.71
CTC1-203ENST00000578240 PZPP20742 1482 aa19.47■□□□□ 0.71
CTC1-203ENST00000578240 EIF2AK4Q9P2K8 1649 aaKnown RBP19.46■□□□□ 0.71
CTC1-203ENST00000578240 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
CTC1-203ENST00000578240 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.7
CTC1-203ENST00000578240 DIP2CQ9Y2E4 1556 aa19.44■□□□□ 0.7
CTC1-203ENST00000578240 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
CTC1-203ENST00000578240 BCORL1Q5H9F3 1711 aa19.44■□□□□ 0.7
CTC1-203ENST00000578240 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
CTC1-203ENST00000578240 MLH3Q9UHC1 1453 aa19.44■□□□□ 0.7
CTC1-203ENST00000578240 MROH1Q8NDA8 1641 aa19.43■□□□□ 0.7
CTC1-203ENST00000578240 SPAG9O60271 1321 aaKnown RBP19.43■□□□□ 0.7
CTC1-203ENST00000578240 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
CTC1-203ENST00000578240 COL17A1Q9UMD9 1497 aaPredicted RBP19.4■□□□□ 0.7
CTC1-203ENST00000578240 RNF17Q9BXT8 1623 aaKnown RBP19.39■□□□□ 0.69
CTC1-203ENST00000578240 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
CTC1-203ENST00000578240 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms