RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 NEO1Q92859 1461 aa24.6■■□□□ 1.53
LITAF-218ENST00000576036 KDM6BO15054 1643 aa24.6■■□□□ 1.53
LITAF-218ENST00000576036 ARHGAP5Q13017 1502 aa24.58■■□□□ 1.53
LITAF-218ENST00000576036 APLP2Q06481 763 aa24.57■■□□□ 1.52
LITAF-218ENST00000576036 SAMD9LQ8IVG5 1584 aa24.55■■□□□ 1.52
LITAF-218ENST00000576036 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
LITAF-218ENST00000576036 FRMPD1Q5SYB0 1578 aa24.54■■□□□ 1.52
LITAF-218ENST00000576036 AKNAQ7Z591 1439 aa24.54■■□□□ 1.52
LITAF-218ENST00000576036 RICTORQ6R327 1708 aa24.53■■□□□ 1.52
LITAF-218ENST00000576036 ABCC1P33527 1531 aa24.51■■□□□ 1.51
LITAF-218ENST00000576036 PHLDB1Q86UU1 1377 aa24.5■■□□□ 1.51
LITAF-218ENST00000576036 ADGRL1O94910 1474 aa24.48■■□□□ 1.51
LITAF-218ENST00000576036 EFCAB2Q5VUJ9 269 aa24.48■■□□□ 1.51
LITAF-218ENST00000576036 ARHGEF12Q9NZN5 1544 aa24.48■■□□□ 1.51
LITAF-218ENST00000576036 MYOM3Q5VTT5 1437 aa24.47■■□□□ 1.51
LITAF-218ENST00000576036 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
LITAF-218ENST00000576036 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
LITAF-218ENST00000576036 SCAPERQ9BY12 1400 aa24.43■■□□□ 1.5
LITAF-218ENST00000576036 CFDP1Q9UEE9 299 aaPredicted RBP24.42■■□□□ 1.5
LITAF-218ENST00000576036 ZNF644Q9H582 1327 aaPredicted RBP24.41■■□□□ 1.5
LITAF-218ENST00000576036 DENND4BO75064 1496 aaPredicted RBP24.41■■□□□ 1.5
LITAF-218ENST00000576036 CAMSAP2Q08AD1 1489 aa24.41■■□□□ 1.5
LITAF-218ENST00000576036 POGZQ7Z3K3 1410 aa24.41■■□□□ 1.5
LITAF-218ENST00000576036 ZMYM4Q5VZL5 1548 aa24.39■■□□□ 1.49
LITAF-218ENST00000576036 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.49
LITAF-218ENST00000576036 KDM5CP41229 1560 aa24.38■■□□□ 1.49
LITAF-218ENST00000576036 MIA2Q96PC5 1412 aa24.38■■□□□ 1.49
LITAF-218ENST00000576036 TRAPPC8Q9Y2L5 1435 aa24.38■■□□□ 1.49
LITAF-218ENST00000576036 RAPGEF3O95398 923 aa24.38■■□□□ 1.49
LITAF-218ENST00000576036 FGD6Q6ZV73 1430 aa24.37■■□□□ 1.49
LITAF-218ENST00000576036 ZNF777Q9ULD5 760 aaPredicted RBP24.37■■□□□ 1.49
LITAF-218ENST00000576036 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
LITAF-218ENST00000576036 PLEKHH2Q8IVE3 1493 aa24.36■■□□□ 1.49
LITAF-218ENST00000576036 MBD5Q9P267 1494 aa24.36■■□□□ 1.49
LITAF-218ENST00000576036 TCOF1Q13428 1488 aaKnown RBP24.34■■□□□ 1.49
LITAF-218ENST00000576036 ZNF518AQ6AHZ1 1483 aa24.32■■□□□ 1.48
LITAF-218ENST00000576036 ARHGEF5Q12774 1597 aa24.32■■□□□ 1.48
LITAF-218ENST00000576036 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.481e-6■■■□□ 15.6
LITAF-218ENST00000576036 HECW2Q9P2P5 1572 aa24.29■■□□□ 1.48
LITAF-218ENST00000576036 KIDINS220Q9ULH0 1771 aa24.29■■□□□ 1.48
LITAF-218ENST00000576036 AFAP1Q8N556 730 aa24.29■■□□□ 1.48
LITAF-218ENST00000576036 ARHGEF40Q8TER5 1519 aa24.29■■□□□ 1.48
LITAF-218ENST00000576036 INO80Q9ULG1 1556 aaPredicted RBP24.28■■□□□ 1.48
LITAF-218ENST00000576036 CROCC2H7BZ55 1655 aa24.27■■□□□ 1.48
LITAF-218ENST00000576036 ABCA6Q8N139 1617 aa24.25■■□□□ 1.47
LITAF-218ENST00000576036 SIGLEC1Q9BZZ2 1709 aa24.25■■□□□ 1.47
LITAF-218ENST00000576036 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
LITAF-218ENST00000576036 CCDC141Q6ZP82 1450 aa24.25■■□□□ 1.47
LITAF-218ENST00000576036 ZFYVE16Q7Z3T8 1539 aa24.25■■□□□ 1.47
LITAF-218ENST00000576036 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
LITAF-218ENST00000576036 MLH3Q9UHC1 1453 aa24.24■■□□□ 1.47
LITAF-218ENST00000576036 MAGI2Q86UL8 1455 aa24.23■■□□□ 1.47
LITAF-218ENST00000576036 DIP2CQ9Y2E4 1556 aa24.23■■□□□ 1.47
LITAF-218ENST00000576036 ATP7AQ04656 1500 aa24.2■■□□□ 1.47
LITAF-218ENST00000576036 MAST1Q9Y2H9 1570 aa24.2■■□□□ 1.46
LITAF-218ENST00000576036 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
LITAF-218ENST00000576036 ABCC5O15440 1437 aa24.18■■□□□ 1.46
LITAF-218ENST00000576036 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
LITAF-218ENST00000576036 DAPK1P53355 1430 aa24.16■■□□□ 1.46
LITAF-218ENST00000576036 SHANK2Q9UPX8 1470 aa24.13■■□□□ 1.45
LITAF-218ENST00000576036 SPAG9O60271 1321 aaKnown RBP24.13■■□□□ 1.45
LITAF-218ENST00000576036 REREQ9P2R6 1566 aa24.12■■□□□ 1.45
LITAF-218ENST00000576036 RTEL1-TNFRSF6BF6WH68 1400 aa24.12■■□□□ 1.45
LITAF-218ENST00000576036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.45
LITAF-218ENST00000576036 RSPH4AQ5TD94 716 aa24.11■■□□□ 1.45
LITAF-218ENST00000576036 ATP10AO60312 1499 aa24.11■■□□□ 1.45
LITAF-218ENST00000576036 PLXNC1O60486 1568 aa24.11■■□□□ 1.45
LITAF-218ENST00000576036 FAM50AQ14320 339 aaKnown RBP24.1■■□□□ 1.45
LITAF-218ENST00000576036 PTPRKQ15262 1439 aa24.1■■□□□ 1.45
LITAF-218ENST00000576036 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
LITAF-218ENST00000576036 ADGRL2O95490 1459 aa24.03■■□□□ 1.44
LITAF-218ENST00000576036 BCORL1Q5H9F3 1711 aa24.03■■□□□ 1.44
LITAF-218ENST00000576036 A2MP01023 1474 aa24.01■■□□□ 1.43
LITAF-218ENST00000576036 AGLP35573 1532 aa24.01■■□□□ 1.43
LITAF-218ENST00000576036 MYT1LQ9UL68 1186 aa24.01■■□□□ 1.43
LITAF-218ENST00000576036 TSPY4P0CV99 314 aa24■■□□□ 1.43
LITAF-218ENST00000576036 TSPY10P0CW01 314 aa24■■□□□ 1.43
LITAF-218ENST00000576036 ADAMTSL3P82987 1691 aa23.98■■□□□ 1.43
LITAF-218ENST00000576036 NCOA1Q15788 1441 aa23.96■■□□□ 1.43
LITAF-218ENST00000576036 CHIC2Q9UKJ5 165 aa23.96■■□□□ 1.43
LITAF-218ENST00000576036 DUOX2Q9NRD8 1548 aa23.94■■□□□ 1.42
LITAF-218ENST00000576036 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
LITAF-218ENST00000576036 EIF2AK4Q9P2K8 1649 aaKnown RBP23.93■■□□□ 1.42
LITAF-218ENST00000576036 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
LITAF-218ENST00000576036 ROCK1Q13464 1354 aa23.91■■□□□ 1.42
LITAF-218ENST00000576036 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
LITAF-218ENST00000576036 ITGAEP38570 1179 aa23.9■■□□□ 1.42
LITAF-218ENST00000576036 MADDQ8WXG6 1647 aa23.9■■□□□ 1.42
LITAF-218ENST00000576036 RNF17Q9BXT8 1623 aaKnown RBP23.9■■□□□ 1.42
LITAF-218ENST00000576036 FER1L4A9Z1Z3 1794 aa23.89■■□□□ 1.42
LITAF-218ENST00000576036 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.41
LITAF-218ENST00000576036 MROH1Q8NDA8 1641 aa23.88■■□□□ 1.41
LITAF-218ENST00000576036 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
LITAF-218ENST00000576036 KDM4FA0A1W2PPD8 638 aa23.87■■□□□ 1.41
LITAF-218ENST00000576036 ARID4BQ4LE39 1312 aaPredicted RBP23.86■■□□□ 1.41
LITAF-218ENST00000576036 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
LITAF-218ENST00000576036 DEPDC5O75140 1603 aa23.85■■□□□ 1.41
LITAF-218ENST00000576036 RIMS1Q86UR5 1692 aaKnown RBP23.85■■□□□ 1.41
LITAF-218ENST00000576036 MLECQ14165 292 aa23.81■■□□□ 1.4
LITAF-218ENST00000576036 CLTCQ00610 1675 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms