RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
LITAF-218ENST00000576036 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.96
LITAF-218ENST00000576036 ABCC9O60706 1549 aa32.45■■■□□ 2.78
LITAF-218ENST00000576036 ZCCHC6Q5VYS8 1495 aaKnown RBP31.63■■■□□ 2.65
LITAF-218ENST00000576036 NACADO15069 1562 aa31.4■■■□□ 2.62
LITAF-218ENST00000576036 RB1CC1Q8TDY2 1594 aa31.35■■■□□ 2.61
LITAF-218ENST00000576036 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
LITAF-218ENST00000576036 MYO15BQ96JP2 1530 aa31.33■■■□□ 2.61
LITAF-218ENST00000576036 DCAF8L2P0C7V8 631 aa31.26■■■□□ 2.59
LITAF-218ENST00000576036 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
LITAF-218ENST00000576036 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
LITAF-218ENST00000576036 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
LITAF-218ENST00000576036 PABPN1Q86U42 306 aaKnown RBP eCLIP30.32■■■□□ 2.44
LITAF-218ENST00000576036 SHROOM4Q9ULL8 1493 aa30.08■■■□□ 2.41
LITAF-218ENST00000576036 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
LITAF-218ENST00000576036 DNAJC5BQ9UF47 199 aa29.52■■■□□ 2.32
LITAF-218ENST00000576036 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
LITAF-218ENST00000576036 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
LITAF-218ENST00000576036 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
LITAF-218ENST00000576036 BAZ1AQ9NRL2 1556 aaPredicted RBP29.28■■■□□ 2.28
LITAF-218ENST00000576036 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
LITAF-218ENST00000576036 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
LITAF-218ENST00000576036 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
LITAF-218ENST00000576036 SMARCA2P51531 1590 aa29■■■□□ 2.23
LITAF-218ENST00000576036 NCAPD3P42695 1498 aa28.96■■■□□ 2.23
LITAF-218ENST00000576036 WIZO95785 1651 aa28.95■■■□□ 2.22
LITAF-218ENST00000576036 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
LITAF-218ENST00000576036 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
LITAF-218ENST00000576036 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
LITAF-218ENST00000576036 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
LITAF-218ENST00000576036 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
LITAF-218ENST00000576036 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
LITAF-218ENST00000576036 NESP48681 1621 aa28.23■■■□□ 2.11
LITAF-218ENST00000576036 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
LITAF-218ENST00000576036 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
LITAF-218ENST00000576036 CFTRP13569 1480 aa28.05■■■□□ 2.08
LITAF-218ENST00000576036 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
LITAF-218ENST00000576036 KIF21AQ7Z4S6 1674 aa27.97■■■□□ 2.07
LITAF-218ENST00000576036 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
LITAF-218ENST00000576036 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
LITAF-218ENST00000576036 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
LITAF-218ENST00000576036 THOC2Q8NI27 1593 aaKnown RBP27.79■■■□□ 2.04
LITAF-218ENST00000576036 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
LITAF-218ENST00000576036 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
LITAF-218ENST00000576036 WDR62O43379 1518 aa27.59■■■□□ 2.01
LITAF-218ENST00000576036 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
LITAF-218ENST00000576036 CUX2O14529 1486 aa27.5■■□□□ 1.99
LITAF-218ENST00000576036 TOPBP1Q92547 1522 aa27.44■■□□□ 1.98
LITAF-218ENST00000576036 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
LITAF-218ENST00000576036 CUX1P39880 1505 aa27.39■■□□□ 1.98
LITAF-218ENST00000576036 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
LITAF-218ENST00000576036 SYNJ1O43426 1573 aa27.27■■□□□ 1.96
LITAF-218ENST00000576036 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
LITAF-218ENST00000576036 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
LITAF-218ENST00000576036 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
LITAF-218ENST00000576036 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
LITAF-218ENST00000576036 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
LITAF-218ENST00000576036 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
LITAF-218ENST00000576036 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
LITAF-218ENST00000576036 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
LITAF-218ENST00000576036 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
LITAF-218ENST00000576036 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
LITAF-218ENST00000576036 SOGA1O94964 1423 aa27.03■■□□□ 1.92
LITAF-218ENST00000576036 EIF4G3O43432 1585 aaKnown RBP26.99■■□□□ 1.91
LITAF-218ENST00000576036 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.9
LITAF-218ENST00000576036 ABCA5Q8WWZ7 1642 aa26.89■■□□□ 1.9
LITAF-218ENST00000576036 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.892e-8■■■□□ 18.1
LITAF-218ENST00000576036 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
LITAF-218ENST00000576036 PBRM1Q86U86 1689 aa26.82■■□□□ 1.88
LITAF-218ENST00000576036 GAPVD1Q14C86 1478 aa26.76■■□□□ 1.87
LITAF-218ENST00000576036 GRIN2BQ13224 1484 aa26.7■■□□□ 1.87
LITAF-218ENST00000576036 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
LITAF-218ENST00000576036 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
LITAF-218ENST00000576036 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
LITAF-218ENST00000576036 CHD1O14646 1710 aa26.64■■□□□ 1.85
LITAF-218ENST00000576036 ERICH3Q5RHP9 1530 aa26.62■■□□□ 1.85
LITAF-218ENST00000576036 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
LITAF-218ENST00000576036 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
LITAF-218ENST00000576036 KIF27Q86VH2 1401 aa26.59■■□□□ 1.85
LITAF-218ENST00000576036 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
LITAF-218ENST00000576036 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
LITAF-218ENST00000576036 IGF1RP08069 1367 aa26.49■■□□□ 1.83
LITAF-218ENST00000576036 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
LITAF-218ENST00000576036 CUL7Q14999 1698 aa26.47■■□□□ 1.83
LITAF-218ENST00000576036 FHAD1B1AJZ9 1412 aa26.45■■□□□ 1.82
LITAF-218ENST00000576036 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
LITAF-218ENST00000576036 FBLN2P98095 1184 aa26.35■■□□□ 1.81
LITAF-218ENST00000576036 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
LITAF-218ENST00000576036 CEP170Q5SW79 1584 aa26.32■■□□□ 1.8
LITAF-218ENST00000576036 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
LITAF-218ENST00000576036 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
LITAF-218ENST00000576036 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
LITAF-218ENST00000576036 EEA1Q15075 1411 aa26.3■■□□□ 1.8
LITAF-218ENST00000576036 NUP160Q12769 1436 aa26.29■■□□□ 1.8
LITAF-218ENST00000576036 PRXQ9BXM0 1461 aa26.26■■□□□ 1.79
LITAF-218ENST00000576036 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
LITAF-218ENST00000576036 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
LITAF-218ENST00000576036 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
LITAF-218ENST00000576036 KIF21BO75037 1637 aa26.13■■□□□ 1.77
LITAF-218ENST00000576036 SHROOM2Q13796 1616 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms