RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 L3MBTL3Q96JM7 780 aaPredicted RBP9.6□□□□□ -0.87
PRPF8-211ENST00000574728 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
PRPF8-211ENST00000574728 METRNQ9UJH8 293 aa9.59□□□□□ -0.87
PRPF8-211ENST00000574728 COLQQ9Y215 455 aaPredicted RBP9.58□□□□□ -0.88
PRPF8-211ENST00000574728 BOLA1Q9Y3E2 137 aa9.58□□□□□ -0.88
PRPF8-211ENST00000574728 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
PRPF8-211ENST00000574728 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
PRPF8-211ENST00000574728 LARP6Q9BRS8 491 aaKnown RBP9.56□□□□□ -0.88
PRPF8-211ENST00000574728 CRISPLD2Q9H0B8 497 aa9.56□□□□□ -0.88
PRPF8-211ENST00000574728 TMEM121BQ9BXQ6 578 aaPredicted RBP9.55□□□□□ -0.88
PRPF8-211ENST00000574728 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
PRPF8-211ENST00000574728 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
PRPF8-211ENST00000574728 NBR1Q14596 966 aa9.53□□□□□ -0.88
PRPF8-211ENST00000574728 MFSD10Q14728 455 aa9.53□□□□□ -0.88
PRPF8-211ENST00000574728 DDX27Q96GQ7 796 aaKnown RBP9.53□□□□□ -0.88
PRPF8-211ENST00000574728 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
PRPF8-211ENST00000574728 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-211ENST00000574728 E2F4Q16254 413 aa9.5□□□□□ -0.89
PRPF8-211ENST00000574728 UNC13AQ9UPW8 1703 aa9.5□□□□□ -0.89
PRPF8-211ENST00000574728 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
PRPF8-211ENST00000574728 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
PRPF8-211ENST00000574728 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
PRPF8-211ENST00000574728 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
PRPF8-211ENST00000574728 C2orf72A6NCS6 295 aa9.44□□□□□ -0.9
PRPF8-211ENST00000574728 FOXK1P85037 733 aa9.44□□□□□ -0.9
PRPF8-211ENST00000574728 DSG2Q14126 1118 aa9.44□□□□□ -0.9
PRPF8-211ENST00000574728 KIF3CO14782 793 aa9.42□□□□□ -0.9
PRPF8-211ENST00000574728 CAMK2BQ13554 666 aa9.42□□□□□ -0.9
PRPF8-211ENST00000574728 SCRIBQ14160 1630 aa9.42□□□□□ -0.9
PRPF8-211ENST00000574728 TMEM92Q6UXU6 159 aa9.4□□□□□ -0.9
PRPF8-211ENST00000574728 PLPP6Q8IY26 295 aa9.4□□□□□ -0.9
PRPF8-211ENST00000574728 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.4□□□□□ -0.9
PRPF8-211ENST00000574728 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
PRPF8-211ENST00000574728 SHROOM4Q9ULL8 1493 aa9.38□□□□□ -0.91
PRPF8-211ENST00000574728 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
PRPF8-211ENST00000574728 MAMSTRQ6ZN01 415 aa9.32□□□□□ -0.92
PRPF8-211ENST00000574728 POTEB2H3BUK9 544 aa9.31□□□□□ -0.92
PRPF8-211ENST00000574728 TULP1O00294 542 aaPredicted RBP9.31□□□□□ -0.92
PRPF8-211ENST00000574728 DPYSL4O14531 572 aa9.31□□□□□ -0.92
PRPF8-211ENST00000574728 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
PRPF8-211ENST00000574728 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
PRPF8-211ENST00000574728 SPDYE16A6NNV3 312 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-211ENST00000574728 SEMA3EO15041 775 aa9.29□□□□□ -0.92
PRPF8-211ENST00000574728 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
PRPF8-211ENST00000574728 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRPF8-211ENST00000574728 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
PRPF8-211ENST00000574728 PDIA6Q15084 440 aa9.27□□□□□ -0.93
PRPF8-211ENST00000574728 OXER1Q8TDS5 423 aa9.27□□□□□ -0.93
PRPF8-211ENST00000574728 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
PRPF8-211ENST00000574728 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
PRPF8-211ENST00000574728 TBC1D12O60347 775 aa9.25□□□□□ -0.93
PRPF8-211ENST00000574728 SLC34A2O95436 690 aa9.25□□□□□ -0.93
PRPF8-211ENST00000574728 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
PRPF8-211ENST00000574728 PTCD2Q8WV60 388 aaKnown RBP9.24□□□□□ -0.93
PRPF8-211ENST00000574728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
PRPF8-211ENST00000574728 EIF4G1Q04637 1599 aaKnown RBP9.23□□□□□ -0.93
PRPF8-211ENST00000574728 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
PRPF8-211ENST00000574728 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
PRPF8-211ENST00000574728 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
PRPF8-211ENST00000574728 EVI5O60447 810 aa9.19□□□□□ -0.94
PRPF8-211ENST00000574728 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
PRPF8-211ENST00000574728 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
PRPF8-211ENST00000574728 CC2D2AQ9P2K1 1620 aa9.18□□□□□ -0.94
PRPF8-211ENST00000574728 RIMBP2O15034 1052 aa9.17□□□□□ -0.94
PRPF8-211ENST00000574728 PCDHGA4Q9Y5G9 962 aa9.17□□□□□ -0.94
PRPF8-211ENST00000574728 LHX8Q68G74 356 aa9.16□□□□□ -0.94
PRPF8-211ENST00000574728 SNPHO15079 494 aa9.15□□□□□ -0.94
PRPF8-211ENST00000574728 HOXB3P14651 431 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-211ENST00000574728 PTGER2P43116 358 aa9.15□□□□□ -0.94
PRPF8-211ENST00000574728 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
PRPF8-211ENST00000574728 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
PRPF8-211ENST00000574728 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
PRPF8-211ENST00000574728 CECR2Q9BXF3 1484 aa9.14□□□□□ -0.95
PRPF8-211ENST00000574728 OTUD5Q96G74 571 aa9.13□□□□□ -0.95
PRPF8-211ENST00000574728 ANO8Q9HCE9 1232 aaPredicted RBP9.13□□□□□ -0.95
PRPF8-211ENST00000574728 DDX12PQ92771 950 aa9.12□□□□□ -0.95
PRPF8-211ENST00000574728 RBM26Q5T8P6 1007 aaKnown RBP9.11□□□□□ -0.95
PRPF8-211ENST00000574728 ARSIQ5FYB1 569 aa9.09□□□□□ -0.95
PRPF8-211ENST00000574728 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
PRPF8-211ENST00000574728 GPR153Q6NV75 609 aa9.08□□□□□ -0.96
PRPF8-211ENST00000574728 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
PRPF8-211ENST00000574728 KDM4FA0A1W2PPD8 638 aa9.07□□□□□ -0.96
PRPF8-211ENST00000574728 PHF14O94880 888 aa9.07□□□□□ -0.96
PRPF8-211ENST00000574728 NUDT7P0C024 238 aa9.07□□□□□ -0.96
PRPF8-211ENST00000574728 OSBPP22059 807 aa9.07□□□□□ -0.96
PRPF8-211ENST00000574728 EPAS1Q99814 870 aa9.07□□□□□ -0.96
PRPF8-211ENST00000574728 KHSRPQ92945 711 aaKnown RBP eCLIP9.06□□□□□ -0.962e-6■□□□□ 8.5
PRPF8-211ENST00000574728 JPH4Q96JJ6 628 aa9.05□□□□□ -0.96
PRPF8-211ENST00000574728 NCAPD3P42695 1498 aa9.04□□□□□ -0.96
PRPF8-211ENST00000574728 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
PRPF8-211ENST00000574728 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
PRPF8-211ENST00000574728 SMARCA4P51532 1647 aa9.03□□□□□ -0.96
PRPF8-211ENST00000574728 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
PRPF8-211ENST00000574728 TYW1BQ6NUM6 668 aa9.03□□□□□ -0.96
PRPF8-211ENST00000574728 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
PRPF8-211ENST00000574728 PCDHGA10Q9Y5H3 936 aa9.03□□□□□ -0.96
PRPF8-211ENST00000574728 FOSBP53539 338 aa9.02□□□□□ -0.97
PRPF8-211ENST00000574728 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
PRPF8-211ENST00000574728 MROH2BQ7Z745 1585 aa9.01□□□□□ -0.97
PRPF8-211ENST00000574728 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms