RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 MIA2Q96PC5 1412 aa17.77■□□□□ 0.44
ATP2A3-213ENST00000574202 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.44
ATP2A3-213ENST00000574202 CD109Q6YHK3 1445 aa17.76■□□□□ 0.43
ATP2A3-213ENST00000574202 FAM50AQ14320 339 aaKnown RBP17.76■□□□□ 0.43
ATP2A3-213ENST00000574202 PTPN23Q9H3S7 1636 aa17.76■□□□□ 0.43
ATP2A3-213ENST00000574202 PLCH2O75038 1416 aa17.75■□□□□ 0.43
ATP2A3-213ENST00000574202 CFDP1Q9UEE9 299 aaPredicted RBP17.75■□□□□ 0.43
ATP2A3-213ENST00000574202 TSPOAP1O95153 1857 aa17.73■□□□□ 0.43
ATP2A3-213ENST00000574202 TCOF1Q13428 1488 aaKnown RBP17.71■□□□□ 0.43
ATP2A3-213ENST00000574202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■■■□ 26.4
ATP2A3-213ENST00000574202 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
ATP2A3-213ENST00000574202 ZNF777Q9ULD5 760 aaPredicted RBP17.7■□□□□ 0.42
ATP2A3-213ENST00000574202 ARHGAP5Q13017 1502 aa17.7■□□□□ 0.42
ATP2A3-213ENST00000574202 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
ATP2A3-213ENST00000574202 FANCAO15360 1455 aa17.68■□□□□ 0.42
ATP2A3-213ENST00000574202 CAMSAP2Q08AD1 1489 aa17.68■□□□□ 0.42
ATP2A3-213ENST00000574202 ITGAEP38570 1179 aa17.67■□□□□ 0.42
ATP2A3-213ENST00000574202 NEO1Q92859 1461 aa17.67■□□□□ 0.42
ATP2A3-213ENST00000574202 CFAP74Q9C0B2 1584 aa17.66■□□□□ 0.42
ATP2A3-213ENST00000574202 TEX14Q8IWB6 1497 aa17.66■□□□□ 0.42
ATP2A3-213ENST00000574202 ABCC1P33527 1531 aa17.66■□□□□ 0.42
ATP2A3-213ENST00000574202 ZNF644Q9H582 1327 aaPredicted RBP17.66■□□□□ 0.42
ATP2A3-213ENST00000574202 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
ATP2A3-213ENST00000574202 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
ATP2A3-213ENST00000574202 COL17A1Q9UMD9 1497 aaPredicted RBP17.63■□□□□ 0.41
ATP2A3-213ENST00000574202 AKNAQ7Z591 1439 aa17.63■□□□□ 0.41
ATP2A3-213ENST00000574202 FRMPD1Q5SYB0 1578 aa17.62■□□□□ 0.41
ATP2A3-213ENST00000574202 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
ATP2A3-213ENST00000574202 DNMT1P26358 1616 aaKnown RBP17.6■□□□□ 0.41
ATP2A3-213ENST00000574202 SYCP2Q9BX26 1530 aa17.59■□□□□ 0.41
ATP2A3-213ENST00000574202 ADGRL1O94910 1474 aa17.59■□□□□ 0.41
ATP2A3-213ENST00000574202 MBD5Q9P267 1494 aa17.58■□□□□ 0.41
ATP2A3-213ENST00000574202 DAPK1P53355 1430 aa17.58■□□□□ 0.41
ATP2A3-213ENST00000574202 RICTORQ6R327 1708 aa17.58■□□□□ 0.4
ATP2A3-213ENST00000574202 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
ATP2A3-213ENST00000574202 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
ATP2A3-213ENST00000574202 ABCC5O15440 1437 aa17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 HNRNPMP52272 730 aaKnown RBP eCLIP17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 POGZQ7Z3K3 1410 aa17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 SCAPERQ9BY12 1400 aa17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 TRAPPC8Q9Y2L5 1435 aa17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 CROCC2H7BZ55 1655 aa17.55■□□□□ 0.4
ATP2A3-213ENST00000574202 KDM6BO15054 1643 aa17.54■□□□□ 0.4
ATP2A3-213ENST00000574202 KDM5CP41229 1560 aa17.54■□□□□ 0.4
ATP2A3-213ENST00000574202 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
ATP2A3-213ENST00000574202 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
ATP2A3-213ENST00000574202 DENND4BO75064 1496 aaPredicted RBP17.52■□□□□ 0.4
ATP2A3-213ENST00000574202 ZMYM4Q5VZL5 1548 aa17.52■□□□□ 0.39
ATP2A3-213ENST00000574202 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
ATP2A3-213ENST00000574202 TSPY4P0CV99 314 aa17.5■□□□□ 0.39
ATP2A3-213ENST00000574202 TSPY10P0CW01 314 aa17.5■□□□□ 0.39
ATP2A3-213ENST00000574202 SHANK2Q9UPX8 1470 aa17.5■□□□□ 0.39
ATP2A3-213ENST00000574202 ADGBQ8N7X0 1667 aa17.49■□□□□ 0.39
ATP2A3-213ENST00000574202 INO80Q9ULG1 1556 aaPredicted RBP17.49■□□□□ 0.39
ATP2A3-213ENST00000574202 ZNF518AQ6AHZ1 1483 aa17.48■□□□□ 0.39
ATP2A3-213ENST00000574202 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
ATP2A3-213ENST00000574202 ROCK1Q13464 1354 aa17.47■□□□□ 0.39
ATP2A3-213ENST00000574202 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
ATP2A3-213ENST00000574202 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
ATP2A3-213ENST00000574202 RAPGEF3O95398 923 aa17.46■□□□□ 0.39
ATP2A3-213ENST00000574202 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
ATP2A3-213ENST00000574202 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
ATP2A3-213ENST00000574202 ANKRD30AQ9BXX3 1397 aa17.45■□□□□ 0.38
ATP2A3-213ENST00000574202 RRP7BPQ9NSQ0 103 aa17.45■□□□□ 0.38
ATP2A3-213ENST00000574202 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
ATP2A3-213ENST00000574202 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
ATP2A3-213ENST00000574202 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
ATP2A3-213ENST00000574202 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
ATP2A3-213ENST00000574202 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
ATP2A3-213ENST00000574202 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
ATP2A3-213ENST00000574202 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
ATP2A3-213ENST00000574202 NAIPQ13075 1403 aa17.42■□□□□ 0.38
ATP2A3-213ENST00000574202 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
ATP2A3-213ENST00000574202 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
ATP2A3-213ENST00000574202 ARHGEF40Q8TER5 1519 aa17.42■□□□□ 0.38
ATP2A3-213ENST00000574202 YEATS2Q9ULM3 1422 aa17.41■□□□□ 0.38
ATP2A3-213ENST00000574202 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
ATP2A3-213ENST00000574202 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
ATP2A3-213ENST00000574202 DIP2CQ9Y2E4 1556 aa17.4■□□□□ 0.38
ATP2A3-213ENST00000574202 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
ATP2A3-213ENST00000574202 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
ATP2A3-213ENST00000574202 PLXNC1O60486 1568 aa17.39■□□□□ 0.37
ATP2A3-213ENST00000574202 RTEL1-TNFRSF6BF6WH68 1400 aa17.38■□□□□ 0.37
ATP2A3-213ENST00000574202 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
ATP2A3-213ENST00000574202 KIF15Q9NS87 1388 aa17.37■□□□□ 0.37
ATP2A3-213ENST00000574202 HRCP23327 699 aa17.35■□□□□ 0.37
ATP2A3-213ENST00000574202 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
ATP2A3-213ENST00000574202 ANKRD50Q9ULJ7 1429 aa17.32■□□□□ 0.36
ATP2A3-213ENST00000574202 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
ATP2A3-213ENST00000574202 ACIN1Q9UKV3 1341 aaKnown RBP17.3■□□□□ 0.36
ATP2A3-213ENST00000574202 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
ATP2A3-213ENST00000574202 ATP10AO60312 1499 aa17.3■□□□□ 0.36
ATP2A3-213ENST00000574202 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.36
ATP2A3-213ENST00000574202 A2MP01023 1474 aa17.27■□□□□ 0.36
ATP2A3-213ENST00000574202 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
ATP2A3-213ENST00000574202 ERBINQ96RT1 1412 aa17.27■□□□□ 0.35
ATP2A3-213ENST00000574202 AGLP35573 1532 aa17.26■□□□□ 0.35
ATP2A3-213ENST00000574202 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
ATP2A3-213ENST00000574202 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms