RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 NUP155O75694 1391 aa25.58■■□□□ 1.69
SLC12A4-212ENST00000573023 RBM19Q9Y4C8 960 aaKnown RBP25.57■■□□□ 1.68
SLC12A4-212ENST00000573023 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
SLC12A4-212ENST00000573023 B4GALNT3Q6L9W6 998 aa25.56■■□□□ 1.68
SLC12A4-212ENST00000573023 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
SLC12A4-212ENST00000573023 SUPT6HQ7KZ85 1726 aaKnown RBP25.53■■□□□ 1.68
SLC12A4-212ENST00000573023 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
SLC12A4-212ENST00000573023 CFAP43Q8NDM7 1665 aa25.53■■□□□ 1.68
SLC12A4-212ENST00000573023 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
SLC12A4-212ENST00000573023 CARMIL2Q6F5E8 1435 aa25.53■■□□□ 1.68
SLC12A4-212ENST00000573023 PTPN23Q9H3S7 1636 aa25.51■■□□□ 1.67
SLC12A4-212ENST00000573023 ANKRD30AQ9BXX3 1397 aa25.5■■□□□ 1.67
SLC12A4-212ENST00000573023 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
SLC12A4-212ENST00000573023 KIF7Q2M1P5 1343 aa25.49■■□□□ 1.67
SLC12A4-212ENST00000573023 IQGAP2Q13576 1575 aa25.47■■□□□ 1.67
SLC12A4-212ENST00000573023 CCDC7Q96M83 1385 aa25.47■■□□□ 1.67
SLC12A4-212ENST00000573023 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
SLC12A4-212ENST00000573023 CTTNBP2Q8WZ74 1663 aa25.45■■□□□ 1.66
SLC12A4-212ENST00000573023 CCDC136Q96JN2 1154 aa25.44■■□□□ 1.66
SLC12A4-212ENST00000573023 ANP32EQ9BTT0 268 aa25.43■■□□□ 1.66
SLC12A4-212ENST00000573023 PPP4R2Q9NY27 417 aa25.42■■□□□ 1.66
SLC12A4-212ENST00000573023 HECW1Q76N89 1606 aa25.42■■□□□ 1.66
SLC12A4-212ENST00000573023 DAPK1P53355 1430 aa25.42■■□□□ 1.66
SLC12A4-212ENST00000573023 ST20-MTHFSA0A0A6YYL1 179 aa25.4■■□□□ 1.66
SLC12A4-212ENST00000573023 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
SLC12A4-212ENST00000573023 UGGT2Q9NYU1 1516 aa25.38■■□□□ 1.65
SLC12A4-212ENST00000573023 ABCC5O15440 1437 aa25.37■■□□□ 1.65
SLC12A4-212ENST00000573023 USP47Q96K76 1375 aa25.37■■□□□ 1.65
SLC12A4-212ENST00000573023 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
SLC12A4-212ENST00000573023 KIAA0586Q9BVV6 1533 aa25.36■■□□□ 1.65
SLC12A4-212ENST00000573023 CNTLNQ9NXG0 1405 aa25.36■■□□□ 1.65
SLC12A4-212ENST00000573023 ANKRD30BQ9BXX2 1392 aa25.35■■□□□ 1.65
SLC12A4-212ENST00000573023 PLB1Q6P1J6 1458 aa25.35■■□□□ 1.65
SLC12A4-212ENST00000573023 MAGI3Q5TCQ9 1506 aa25.35■■□□□ 1.65
SLC12A4-212ENST00000573023 CC2D1BQ5T0F9 858 aaKnown RBP25.33■■□□□ 1.65
SLC12A4-212ENST00000573023 ABCA5Q8WWZ7 1642 aa25.31■■□□□ 1.64
SLC12A4-212ENST00000573023 ANKRD50Q9ULJ7 1429 aa25.31■■□□□ 1.64
SLC12A4-212ENST00000573023 TROQ12816 1431 aaPredicted RBP25.3■■□□□ 1.64
SLC12A4-212ENST00000573023 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
SLC12A4-212ENST00000573023 ROCK2O75116 1388 aaKnown RBP25.27■■□□□ 1.64
SLC12A4-212ENST00000573023 PTPRGP23470 1445 aa25.27■■□□□ 1.64
SLC12A4-212ENST00000573023 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
SLC12A4-212ENST00000573023 CHGAP10645 457 aaKnown RBP25.26■■□□□ 1.63
SLC12A4-212ENST00000573023 NPM2Q86SE8 214 aaKnown RBP25.25■■□□□ 1.63
SLC12A4-212ENST00000573023 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
SLC12A4-212ENST00000573023 ROCK1Q13464 1354 aa25.24■■□□□ 1.63
SLC12A4-212ENST00000573023 ZBED9Q6R2W3 1325 aa25.23■■□□□ 1.63
SLC12A4-212ENST00000573023 KIF15Q9NS87 1388 aa25.22■■□□□ 1.63
SLC12A4-212ENST00000573023 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
SLC12A4-212ENST00000573023 NCOA1Q15788 1441 aa25.19■■□□□ 1.62
SLC12A4-212ENST00000573023 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
SLC12A4-212ENST00000573023 TCOF1Q13428 1488 aaKnown RBP25.17■■□□□ 1.62
SLC12A4-212ENST00000573023 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
SLC12A4-212ENST00000573023 RPRD2Q5VT52 1461 aaKnown RBP25.17■■□□□ 1.62
SLC12A4-212ENST00000573023 AKNAQ7Z591 1439 aa25.17■■□□□ 1.62
SLC12A4-212ENST00000573023 NUDCQ9Y266 331 aa25.15■■□□□ 1.62
SLC12A4-212ENST00000573023 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
SLC12A4-212ENST00000573023 WDR62O43379 1518 aa25.13■■□□□ 1.61
SLC12A4-212ENST00000573023 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
SLC12A4-212ENST00000573023 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
SLC12A4-212ENST00000573023 NBPF1Q3BBV0 1214 aa25.12■■□□□ 1.61
SLC12A4-212ENST00000573023 KDM6BO15054 1643 aa25.12■■□□□ 1.61
SLC12A4-212ENST00000573023 ANP32AP39687 249 aaKnown RBP25.12■■□□□ 1.61
SLC12A4-212ENST00000573023 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
SLC12A4-212ENST00000573023 NBR1Q14596 966 aa25.1■■□□□ 1.61
SLC12A4-212ENST00000573023 ARHGEF11O15085 1522 aa25.1■■□□□ 1.61
SLC12A4-212ENST00000573023 DISP1Q96F81 1524 aa25.1■■□□□ 1.61
SLC12A4-212ENST00000573023 GPATCH8Q9UKJ3 1502 aaKnown RBP25.09■■□□□ 1.61
SLC12A4-212ENST00000573023 ERICH6BQ5W0A0 696 aa25.09■■□□□ 1.61
SLC12A4-212ENST00000573023 WDR43Q15061 677 aaKnown RBP eCLIP25.09■■□□□ 1.61
SLC12A4-212ENST00000573023 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
SLC12A4-212ENST00000573023 KNSTRNQ9Y448 316 aa25.07■■□□□ 1.6
SLC12A4-212ENST00000573023 TMF1P82094 1093 aa25.07■■□□□ 1.6
SLC12A4-212ENST00000573023 RSPH4AQ5TD94 716 aa25.07■■□□□ 1.6
SLC12A4-212ENST00000573023 RALBP1Q15311 655 aa25.06■■□□□ 1.6
SLC12A4-212ENST00000573023 EFCAB2Q5VUJ9 269 aa25.06■■□□□ 1.6
SLC12A4-212ENST00000573023 SYNJ2O15056 1496 aa25.05■■□□□ 1.6
SLC12A4-212ENST00000573023 KTN1Q86UP2 1357 aaKnown RBP25.04■■□□□ 1.6
SLC12A4-212ENST00000573023 PANK3Q9H999 370 aa25.03■■□□□ 1.6
SLC12A4-212ENST00000573023 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
SLC12A4-212ENST00000573023 NLRP13Q86W25 1043 aa25.02■■□□□ 1.6
SLC12A4-212ENST00000573023 KIAA0556O60303 1618 aa25■■□□□ 1.59
SLC12A4-212ENST00000573023 PNISRQ8TF01 805 aaKnown RBP25■■□□□ 1.59
SLC12A4-212ENST00000573023 RAPGEF6Q8TEU7 1601 aa24.99■■□□□ 1.59
SLC12A4-212ENST00000573023 RTL5Q5HYW3 569 aaPredicted RBP24.99■■□□□ 1.59
SLC12A4-212ENST00000573023 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
SLC12A4-212ENST00000573023 RCAN3Q9UKA8 241 aa24.99■■□□□ 1.59
SLC12A4-212ENST00000573023 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
SLC12A4-212ENST00000573023 DAXXQ9UER7 740 aaPredicted RBP24.98■■□□□ 1.59
SLC12A4-212ENST00000573023 DENND4BO75064 1496 aaPredicted RBP24.97■■□□□ 1.59
SLC12A4-212ENST00000573023 AFAP1Q8N556 730 aa24.94■■□□□ 1.58
SLC12A4-212ENST00000573023 KIF3BO15066 747 aa24.94■■□□□ 1.58
SLC12A4-212ENST00000573023 NPM1P06748 294 aaKnown RBP eCLIP24.94■■□□□ 1.58
SLC12A4-212ENST00000573023 SPAG9O60271 1321 aaKnown RBP24.94■■□□□ 1.58
SLC12A4-212ENST00000573023 ZBTB47Q9UFB7 747 aaPredicted RBP24.93■■□□□ 1.58
SLC12A4-212ENST00000573023 ATP10BO94823 1461 aa24.93■■□□□ 1.58
SLC12A4-212ENST00000573023 PLIN1O60240 522 aa24.92■■□□□ 1.58
SLC12A4-212ENST00000573023 PZPP20742 1482 aa24.92■■□□□ 1.58
SLC12A4-212ENST00000573023 LRRIQ1Q96JM4 1722 aa24.92■■□□□ 1.58
SLC12A4-212ENST00000573023 TNNT2P45379 298 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms