RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 PREX2Q70Z35 1606 aa29.41■■■□□ 2.3
RPH3AL-209ENST00000572965 NCOA2Q15596 1464 aa29.41■■■□□ 2.3
RPH3AL-209ENST00000572965 AKNAQ7Z591 1439 aa29.39■■■□□ 2.3
RPH3AL-209ENST00000572965 CDC42BPAQ5VT25 1732 aa29.37■■■□□ 2.29
RPH3AL-209ENST00000572965 GPATCH8Q9UKJ3 1502 aaKnown RBP29.37■■■□□ 2.29
RPH3AL-209ENST00000572965 CFDP1Q9UEE9 299 aaPredicted RBP29.37■■■□□ 2.29
RPH3AL-209ENST00000572965 ITSN2Q9NZM3 1697 aa29.36■■■□□ 2.29
RPH3AL-209ENST00000572965 CDC42BPBQ9Y5S2 1711 aa29.34■■■□□ 2.29
RPH3AL-209ENST00000572965 ADGRL1O94910 1474 aa29.33■■■□□ 2.29
RPH3AL-209ENST00000572965 ZNF777Q9ULD5 760 aaPredicted RBP29.32■■■□□ 2.28
RPH3AL-209ENST00000572965 DENND4BO75064 1496 aaPredicted RBP29.3■■■□□ 2.28
RPH3AL-209ENST00000572965 COL17A1Q9UMD9 1497 aaPredicted RBP29.29■■■□□ 2.28
RPH3AL-209ENST00000572965 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
RPH3AL-209ENST00000572965 PLEKHH2Q8IVE3 1493 aa29.24■■■□□ 2.27
RPH3AL-209ENST00000572965 RAPGEF3O95398 923 aa29.23■■■□□ 2.27
RPH3AL-209ENST00000572965 MYOM3Q5VTT5 1437 aa29.21■■■□□ 2.27
RPH3AL-209ENST00000572965 ABCC1P33527 1531 aa29.2■■■□□ 2.27
RPH3AL-209ENST00000572965 POGZQ7Z3K3 1410 aa29.19■■■□□ 2.26
RPH3AL-209ENST00000572965 SAMD9LQ8IVG5 1584 aa29.18■■■□□ 2.26
RPH3AL-209ENST00000572965 MIA2Q96PC5 1412 aa29.17■■■□□ 2.26
RPH3AL-209ENST00000572965 ZNF518AQ6AHZ1 1483 aa29.17■■■□□ 2.26
RPH3AL-209ENST00000572965 RICTORQ6R327 1708 aa29.15■■■□□ 2.26
RPH3AL-209ENST00000572965 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
RPH3AL-209ENST00000572965 PPARGC1BQ86YN6 1023 aaKnown RBP29.14■■■□□ 2.26
RPH3AL-209ENST00000572965 MYT1LQ9UL68 1186 aa29.14■■■□□ 2.26
RPH3AL-209ENST00000572965 SYCP2Q9BX26 1530 aa29.13■■■□□ 2.25
RPH3AL-209ENST00000572965 FRMPD1Q5SYB0 1578 aa29.13■■■□□ 2.25
RPH3AL-209ENST00000572965 CAMSAP2Q08AD1 1489 aa29.11■■■□□ 2.25
RPH3AL-209ENST00000572965 HNRNPMP52272 730 aaKnown RBP eCLIP29.11■■■□□ 2.25
RPH3AL-209ENST00000572965 ZNF644Q9H582 1327 aaPredicted RBP29.11■■■□□ 2.25
RPH3AL-209ENST00000572965 AFAP1Q8N556 730 aa29.09■■■□□ 2.25
RPH3AL-209ENST00000572965 ZMYM4Q5VZL5 1548 aa29.09■■■□□ 2.25
RPH3AL-209ENST00000572965 ARHGEF12Q9NZN5 1544 aa29.08■■■□□ 2.25
RPH3AL-209ENST00000572965 RSPH4AQ5TD94 716 aa29.07■■■□□ 2.24
RPH3AL-209ENST00000572965 FGD6Q6ZV73 1430 aa29.07■■■□□ 2.24
RPH3AL-209ENST00000572965 MAGI2Q86UL8 1455 aa29.07■■■□□ 2.24
RPH3AL-209ENST00000572965 TRAPPC8Q9Y2L5 1435 aa29.07■■■□□ 2.24
RPH3AL-209ENST00000572965 KDM5CP41229 1560 aa29.04■■■□□ 2.24
RPH3AL-209ENST00000572965 PTPN23Q9H3S7 1636 aa29.02■■■□□ 2.24
RPH3AL-209ENST00000572965 SPAG9O60271 1321 aaKnown RBP29.02■■■□□ 2.24
RPH3AL-209ENST00000572965 ZFYVE16Q7Z3T8 1539 aa29.02■■■□□ 2.24
RPH3AL-209ENST00000572965 HECW2Q9P2P5 1572 aa29.01■■■□□ 2.24
RPH3AL-209ENST00000572965 CCDC141Q6ZP82 1450 aa29■■■□□ 2.23
RPH3AL-209ENST00000572965 ARHGEF40Q8TER5 1519 aa28.99■■■□□ 2.23
RPH3AL-209ENST00000572965 MBD5Q9P267 1494 aa28.98■■■□□ 2.23
RPH3AL-209ENST00000572965 MLH3Q9UHC1 1453 aa28.98■■■□□ 2.23
RPH3AL-209ENST00000572965 TSPY4P0CV99 314 aa28.98■■■□□ 2.23
RPH3AL-209ENST00000572965 TSPY10P0CW01 314 aa28.98■■■□□ 2.23
RPH3AL-209ENST00000572965 FAM50AQ14320 339 aaKnown RBP28.97■■■□□ 2.23
RPH3AL-209ENST00000572965 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
RPH3AL-209ENST00000572965 TCOF1Q13428 1488 aaKnown RBP28.95■■■□□ 2.22
RPH3AL-209ENST00000572965 YEATS2Q9ULM3 1422 aa28.94■■■□□ 2.22
RPH3AL-209ENST00000572965 ATP7AQ04656 1500 aa28.9■■■□□ 2.22
RPH3AL-209ENST00000572965 ATP10AO60312 1499 aa28.9■■■□□ 2.22
RPH3AL-209ENST00000572965 ARID4BQ4LE39 1312 aaPredicted RBP28.89■■■□□ 2.21
RPH3AL-209ENST00000572965 RTEL1-TNFRSF6BF6WH68 1400 aa28.87■■■□□ 2.21
RPH3AL-209ENST00000572965 C9orf84Q5VXU9 1444 aa28.87■■■□□ 2.21
RPH3AL-209ENST00000572965 KIDINS220Q9ULH0 1771 aa28.87■■■□□ 2.21
RPH3AL-209ENST00000572965 INO80Q9ULG1 1556 aaPredicted RBP28.87■■■□□ 2.21
RPH3AL-209ENST00000572965 DIP2CQ9Y2E4 1556 aa28.84■■■□□ 2.21
RPH3AL-209ENST00000572965 ABCA6Q8N139 1617 aa28.84■■■□□ 2.21
RPH3AL-209ENST00000572965 DNMT1P26358 1616 aaKnown RBP28.83■■■□□ 2.21
RPH3AL-209ENST00000572965 DAPK1P53355 1430 aa28.82■■■□□ 2.2
RPH3AL-209ENST00000572965 SHANK2Q9UPX8 1470 aa28.8■■■□□ 2.2
RPH3AL-209ENST00000572965 ABCC5O15440 1437 aa28.8■■■□□ 2.2
RPH3AL-209ENST00000572965 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
RPH3AL-209ENST00000572965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.79■■■□□ 2.2
RPH3AL-209ENST00000572965 CROCC2H7BZ55 1655 aa28.78■■■□□ 2.2
RPH3AL-209ENST00000572965 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
RPH3AL-209ENST00000572965 REREQ9P2R6 1566 aa28.77■■■□□ 2.2
RPH3AL-209ENST00000572965 A2MP01023 1474 aa28.76■■■□□ 2.19
RPH3AL-209ENST00000572965 ADGBQ8N7X0 1667 aa28.76■■■□□ 2.19
RPH3AL-209ENST00000572965 ANKRD30AQ9BXX3 1397 aa28.72■■■□□ 2.19
RPH3AL-209ENST00000572965 ITGAEP38570 1179 aa28.71■■■□□ 2.19
RPH3AL-209ENST00000572965 CHIC2Q9UKJ5 165 aa28.71■■■□□ 2.19
RPH3AL-209ENST00000572965 PLXNC1O60486 1568 aa28.7■■■□□ 2.18
RPH3AL-209ENST00000572965 MLECQ14165 292 aa28.69■■■□□ 2.18
RPH3AL-209ENST00000572965 AGLP35573 1532 aa28.69■■■□□ 2.18
RPH3AL-209ENST00000572965 DHX29Q7Z478 1369 aaKnown RBP28.68■■■□□ 2.18
RPH3AL-209ENST00000572965 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
RPH3AL-209ENST00000572965 KIF15Q9NS87 1388 aa28.65■■■□□ 2.18
RPH3AL-209ENST00000572965 RRP7BPQ9NSQ0 103 aa28.65■■■□□ 2.18
RPH3AL-209ENST00000572965 DUOX2Q9NRD8 1548 aa28.63■■■□□ 2.17
RPH3AL-209ENST00000572965 SIGLEC1Q9BZZ2 1709 aa28.63■■■□□ 2.17
RPH3AL-209ENST00000572965 ADGRL2O95490 1459 aa28.62■■■□□ 2.17
RPH3AL-209ENST00000572965 ESF1Q9H501 851 aaKnown RBP28.62■■■□□ 2.17
RPH3AL-209ENST00000572965 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
RPH3AL-209ENST00000572965 KDM4FA0A1W2PPD8 638 aa28.6■■■□□ 2.17
RPH3AL-209ENST00000572965 KIF3BO15066 747 aa28.59■■■□□ 2.17
RPH3AL-209ENST00000572965 ROCK1Q13464 1354 aa28.57■■■□□ 2.16
RPH3AL-209ENST00000572965 ADAMTSL3P82987 1691 aa28.56■■■□□ 2.16
RPH3AL-209ENST00000572965 PTPRKQ15262 1439 aa28.56■■■□□ 2.16
RPH3AL-209ENST00000572965 GGT6Q6P531 493 aa28.56■■■□□ 2.16
RPH3AL-209ENST00000572965 ERBINQ96RT1 1412 aa28.55■■■□□ 2.16
RPH3AL-209ENST00000572965 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
RPH3AL-209ENST00000572965 EIF2AK4Q9P2K8 1649 aaKnown RBP28.53■■■□□ 2.16
RPH3AL-209ENST00000572965 MADDQ8WXG6 1647 aa28.52■■■□□ 2.16
RPH3AL-209ENST00000572965 FER1L4A9Z1Z3 1794 aa28.52■■■□□ 2.16
RPH3AL-209ENST00000572965 PPP6R1Q9UPN7 881 aa28.5■■■□□ 2.15
RPH3AL-209ENST00000572965 ANKRD50Q9ULJ7 1429 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms