RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
RPH3AL-209ENST00000572965 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
RPH3AL-209ENST00000572965 ABCC9O60706 1549 aa38.8■■■■□ 3.8
RPH3AL-209ENST00000572965 DCAF8L2P0C7V8 631 aa37.67■■■■□ 3.62
RPH3AL-209ENST00000572965 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
RPH3AL-209ENST00000572965 NACADO15069 1562 aa37.51■■■■□ 3.6
RPH3AL-209ENST00000572965 RB1CC1Q8TDY2 1594 aa37.5■■■■□ 3.59
RPH3AL-209ENST00000572965 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
RPH3AL-209ENST00000572965 DCAF1Q9Y4B6 1507 aa37.3■■■■□ 3.56
RPH3AL-209ENST00000572965 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
RPH3AL-209ENST00000572965 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
RPH3AL-209ENST00000572965 PABPN1Q86U42 306 aaKnown RBP eCLIP36.31■■■■□ 3.4
RPH3AL-209ENST00000572965 BICRAQ9NZM4 1560 aa36.21■■■■□ 3.39
RPH3AL-209ENST00000572965 SHROOM4Q9ULL8 1493 aa36■■■■□ 3.35
RPH3AL-209ENST00000572965 EIF4G1Q04637 1599 aaKnown RBP35.31■■■■□ 3.24
RPH3AL-209ENST00000572965 DNAJC5BQ9UF47 199 aa35.21■■■■□ 3.23
RPH3AL-209ENST00000572965 CC2D2AQ9P2K1 1620 aa35.09■■■■□ 3.21
RPH3AL-209ENST00000572965 CECR2Q9BXF3 1484 aa35.01■■■■□ 3.19
RPH3AL-209ENST00000572965 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
RPH3AL-209ENST00000572965 SMARCA4P51532 1647 aa34.9■■■■□ 3.18
RPH3AL-209ENST00000572965 MROH2BQ7Z745 1585 aa34.7■■■■□ 3.14
RPH3AL-209ENST00000572965 SMARCA2P51531 1590 aa34.67■■■■□ 3.14
RPH3AL-209ENST00000572965 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
RPH3AL-209ENST00000572965 NCAPD3P42695 1498 aa34.57■■■■□ 3.12
RPH3AL-209ENST00000572965 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
RPH3AL-209ENST00000572965 HMGXB3Q12766 1538 aa34.45■■■■□ 3.1
RPH3AL-209ENST00000572965 RSF1Q96T23 1441 aaPredicted RBP34.43■■■■□ 3.1
RPH3AL-209ENST00000572965 BAZ1BQ9UIG0 1483 aaKnown RBP34.43■■■■□ 3.1
RPH3AL-209ENST00000572965 WIZO95785 1651 aa34.35■■■■□ 3.09
RPH3AL-209ENST00000572965 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
RPH3AL-209ENST00000572965 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
RPH3AL-209ENST00000572965 LAMC3Q9Y6N6 1575 aa33.65■■■□□ 2.98
RPH3AL-209ENST00000572965 CCDC88BA6NC98 1476 aa33.62■■■□□ 2.97
RPH3AL-209ENST00000572965 CADPSQ9ULU8 1353 aa33.61■■■□□ 2.97
RPH3AL-209ENST00000572965 NESP48681 1621 aa33.61■■■□□ 2.97
RPH3AL-209ENST00000572965 ERCC6Q03468 1493 aa33.52■■■□□ 2.96
RPH3AL-209ENST00000572965 PDS5BQ9NTI5 1447 aa33.46■■■□□ 2.95
RPH3AL-209ENST00000572965 CFTRP13569 1480 aa33.44■■■□□ 2.94
RPH3AL-209ENST00000572965 KIF21AQ7Z4S6 1674 aa33.24■■■□□ 2.91
RPH3AL-209ENST00000572965 PRDM2Q13029 1718 aa33.23■■■□□ 2.91
RPH3AL-209ENST00000572965 FANCD2Q9BXW9 1451 aa33.23■■■□□ 2.91
RPH3AL-209ENST00000572965 CEP164Q9UPV0 1460 aa33.19■■■□□ 2.9
RPH3AL-209ENST00000572965 MRC2Q9UBG0 1479 aa33.05■■■□□ 2.88
RPH3AL-209ENST00000572965 THOC2Q8NI27 1593 aaKnown RBP33.04■■■□□ 2.88
RPH3AL-209ENST00000572965 CUX2O14529 1486 aa32.99■■■□□ 2.87
RPH3AL-209ENST00000572965 WDR62O43379 1518 aa32.9■■■□□ 2.86
RPH3AL-209ENST00000572965 ABCC8Q09428 1581 aa32.82■■■□□ 2.84
RPH3AL-209ENST00000572965 URB2Q14146 1524 aaKnown RBP32.82■■■□□ 2.84
RPH3AL-209ENST00000572965 DNMBPQ6XZF7 1577 aa32.72■■■□□ 2.83
RPH3AL-209ENST00000572965 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
RPH3AL-209ENST00000572965 CUX1P39880 1505 aa32.55■■■□□ 2.8
RPH3AL-209ENST00000572965 WRNQ14191 1432 aaPredicted RBP eCLIP32.52■■■□□ 2.8
RPH3AL-209ENST00000572965 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
RPH3AL-209ENST00000572965 POLA1P09884 1462 aaPredicted RBP32.45■■■□□ 2.79
RPH3AL-209ENST00000572965 FGD5Q6ZNL6 1462 aa32.43■■■□□ 2.78
RPH3AL-209ENST00000572965 TOP2BQ02880 1626 aa32.38■■■□□ 2.77
RPH3AL-209ENST00000572965 SOGA1O94964 1423 aa32.37■■■□□ 2.77
RPH3AL-209ENST00000572965 BIVM-ERCC5R4GMW8 1640 aa32.36■■■□□ 2.77
RPH3AL-209ENST00000572965 SYNJ1O43426 1573 aa32.35■■■□□ 2.77
RPH3AL-209ENST00000572965 TARBP1Q13395 1621 aaKnown RBP32.29■■■□□ 2.76
RPH3AL-209ENST00000572965 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
RPH3AL-209ENST00000572965 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
RPH3AL-209ENST00000572965 EIF4G3O43432 1585 aaKnown RBP32.15■■■□□ 2.74
RPH3AL-209ENST00000572965 WDR97A6NE52 1622 aa32.15■■■□□ 2.74
RPH3AL-209ENST00000572965 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
RPH3AL-209ENST00000572965 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
RPH3AL-209ENST00000572965 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.73
RPH3AL-209ENST00000572965 TRIM41Q8WV44 630 aa32.04■■■□□ 2.72
RPH3AL-209ENST00000572965 GAPVD1Q14C86 1478 aa32■■■□□ 2.71
RPH3AL-209ENST00000572965 GRIN2BQ13224 1484 aa31.96■■■□□ 2.71
RPH3AL-209ENST00000572965 ABCA5Q8WWZ7 1642 aa31.94■■■□□ 2.7
RPH3AL-209ENST00000572965 PBRM1Q86U86 1689 aa31.88■■■□□ 2.69
RPH3AL-209ENST00000572965 KIF27Q86VH2 1401 aa31.86■■■□□ 2.69
RPH3AL-209ENST00000572965 SNAPC4Q5SXM2 1469 aa31.85■■■□□ 2.69
RPH3AL-209ENST00000572965 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
RPH3AL-209ENST00000572965 FBLN2P98095 1184 aa31.79■■■□□ 2.68
RPH3AL-209ENST00000572965 ERICH3Q5RHP9 1530 aa31.77■■■□□ 2.68
RPH3AL-209ENST00000572965 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
RPH3AL-209ENST00000572965 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
RPH3AL-209ENST00000572965 OSCARQ8IYS5 282 aa31.72■■■□□ 2.67
RPH3AL-209ENST00000572965 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
RPH3AL-209ENST00000572965 CHD1O14646 1710 aa31.67■■■□□ 2.66
RPH3AL-209ENST00000572965 FHAD1B1AJZ9 1412 aa31.65■■■□□ 2.66
RPH3AL-209ENST00000572965 ADAMTS12P58397 1594 aa31.64■■■□□ 2.66
RPH3AL-209ENST00000572965 IGF1RP08069 1367 aa31.6■■■□□ 2.65
RPH3AL-209ENST00000572965 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
RPH3AL-209ENST00000572965 CUL7Q14999 1698 aa31.57■■■□□ 2.64
RPH3AL-209ENST00000572965 GRIN2AQ12879 1464 aa31.52■■■□□ 2.64
RPH3AL-209ENST00000572965 RUSC2Q8N2Y8 1516 aa31.52■■■□□ 2.64
RPH3AL-209ENST00000572965 CARMIL1Q5VZK9 1371 aa31.48■■■□□ 2.63
RPH3AL-209ENST00000572965 EEA1Q15075 1411 aa31.48■■■□□ 2.63
RPH3AL-209ENST00000572965 CSRNP3Q8WYN3 585 aa31.35■■■□□ 2.61
RPH3AL-209ENST00000572965 NUP160Q12769 1436 aa31.34■■■□□ 2.61
RPH3AL-209ENST00000572965 RAPGEF2Q9Y4G8 1499 aa31.33■■■□□ 2.61
RPH3AL-209ENST00000572965 FAM9AQ8IZU1 332 aaPredicted RBP31.33■■■□□ 2.61
RPH3AL-209ENST00000572965 CLASP1Q7Z460 1538 aa31.31■■■□□ 2.6
RPH3AL-209ENST00000572965 CEP170Q5SW79 1584 aa31.3■■■□□ 2.6
RPH3AL-209ENST00000572965 PRXQ9BXM0 1461 aa31.23■■■□□ 2.59
RPH3AL-209ENST00000572965 KIAA0586Q9BVV6 1533 aa31.16■■■□□ 2.58
RPH3AL-209ENST00000572965 ARHGEF11O15085 1522 aa31.14■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms