RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 CDC42BPBQ9Y5S2 1711 aa15.02■□□□□ -0
TOM1L1-210ENST00000572158 PLCH2O75038 1416 aa15.02■□□□□ -0
TOM1L1-210ENST00000572158 MAP3K4Q9Y6R4 1608 aa15.02□□□□□ -0.01
TOM1L1-210ENST00000572158 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
TOM1L1-210ENST00000572158 CD109Q6YHK3 1445 aa15.01□□□□□ -0.01
TOM1L1-210ENST00000572158 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
TOM1L1-210ENST00000572158 MYO5CQ9NQX4 1742 aa15□□□□□ -0.01
TOM1L1-210ENST00000572158 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
TOM1L1-210ENST00000572158 RRBP1Q9P2E9 1410 aaKnown RBP14.99□□□□□ -0.01
TOM1L1-210ENST00000572158 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
TOM1L1-210ENST00000572158 ITSN2Q9NZM3 1697 aa14.98□□□□□ -0.01
TOM1L1-210ENST00000572158 MIA2Q96PC5 1412 aa14.98□□□□□ -0.01
TOM1L1-210ENST00000572158 ARAP3Q8WWN8 1544 aa14.97□□□□□ -0.01
TOM1L1-210ENST00000572158 PPRC1Q5VV67 1664 aaKnown RBP14.97□□□□□ -0.01
TOM1L1-210ENST00000572158 ARHGAP5Q13017 1502 aa14.96□□□□□ -0.01
TOM1L1-210ENST00000572158 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
TOM1L1-210ENST00000572158 PTPN23Q9H3S7 1636 aa14.95□□□□□ -0.02
TOM1L1-210ENST00000572158 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
TOM1L1-210ENST00000572158 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
TOM1L1-210ENST00000572158 FANCAO15360 1455 aa14.94□□□□□ -0.02
TOM1L1-210ENST00000572158 EFCAB2Q5VUJ9 269 aa14.93□□□□□ -0.02
TOM1L1-210ENST00000572158 CAMSAP2Q08AD1 1489 aa14.93□□□□□ -0.02
TOM1L1-210ENST00000572158 TSPOAP1O95153 1857 aa14.93□□□□□ -0.02
TOM1L1-210ENST00000572158 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
TOM1L1-210ENST00000572158 ARHGEF12Q9NZN5 1544 aa14.92□□□□□ -0.02
TOM1L1-210ENST00000572158 FAM50AQ14320 339 aaKnown RBP14.91□□□□□ -0.02
TOM1L1-210ENST00000572158 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
TOM1L1-210ENST00000572158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.9□□□□□ -0.02
TOM1L1-210ENST00000572158 AKNAQ7Z591 1439 aa14.89□□□□□ -0.03
TOM1L1-210ENST00000572158 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.03
TOM1L1-210ENST00000572158 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
TOM1L1-210ENST00000572158 NEO1Q92859 1461 aa14.89□□□□□ -0.03
TOM1L1-210ENST00000572158 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
TOM1L1-210ENST00000572158 ABCC1P33527 1531 aa14.88□□□□□ -0.03
TOM1L1-210ENST00000572158 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
TOM1L1-210ENST00000572158 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
TOM1L1-210ENST00000572158 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
TOM1L1-210ENST00000572158 ADGRL1O94910 1474 aa14.86□□□□□ -0.03
TOM1L1-210ENST00000572158 ABCC5O15440 1437 aa14.86□□□□□ -0.03
TOM1L1-210ENST00000572158 SCAPERQ9BY12 1400 aa14.86□□□□□ -0.03
TOM1L1-210ENST00000572158 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
TOM1L1-210ENST00000572158 TEX14Q8IWB6 1497 aa14.85□□□□□ -0.03
TOM1L1-210ENST00000572158 CFAP74Q9C0B2 1584 aa14.85□□□□□ -0.03
TOM1L1-210ENST00000572158 PLEKHH2Q8IVE3 1493 aa14.84□□□□□ -0.03
TOM1L1-210ENST00000572158 COL17A1Q9UMD9 1497 aaPredicted RBP14.84□□□□□ -0.03
TOM1L1-210ENST00000572158 DNMT1P26358 1616 aaKnown RBP14.84□□□□□ -0.03
TOM1L1-210ENST00000572158 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
TOM1L1-210ENST00000572158 DAPK1P53355 1430 aa14.83□□□□□ -0.03
TOM1L1-210ENST00000572158 ITGAEP38570 1179 aa14.83□□□□□ -0.04
TOM1L1-210ENST00000572158 AFAP1Q8N556 730 aa14.83□□□□□ -0.04
TOM1L1-210ENST00000572158 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
TOM1L1-210ENST00000572158 RAPGEF3O95398 923 aa14.81□□□□□ -0.04
TOM1L1-210ENST00000572158 CCDC141Q6ZP82 1450 aa14.8□□□□□ -0.04
TOM1L1-210ENST00000572158 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
TOM1L1-210ENST00000572158 POGZQ7Z3K3 1410 aa14.8□□□□□ -0.04
TOM1L1-210ENST00000572158 CROCC2H7BZ55 1655 aa14.8□□□□□ -0.04
TOM1L1-210ENST00000572158 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
TOM1L1-210ENST00000572158 DENND4BO75064 1496 aaPredicted RBP14.79□□□□□ -0.04
TOM1L1-210ENST00000572158 RSPH4AQ5TD94 716 aa14.78□□□□□ -0.04
TOM1L1-210ENST00000572158 RICTORQ6R327 1708 aa14.78□□□□□ -0.04
TOM1L1-210ENST00000572158 CHIC2Q9UKJ5 165 aa14.78□□□□□ -0.04
TOM1L1-210ENST00000572158 KDM5CP41229 1560 aa14.77□□□□□ -0.05
TOM1L1-210ENST00000572158 ZNF518AQ6AHZ1 1483 aa14.76□□□□□ -0.05
TOM1L1-210ENST00000572158 C9orf84Q5VXU9 1444 aa14.76□□□□□ -0.05
TOM1L1-210ENST00000572158 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
TOM1L1-210ENST00000572158 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
TOM1L1-210ENST00000572158 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
TOM1L1-210ENST00000572158 TSPY10P0CW01 314 aa14.74□□□□□ -0.05
TOM1L1-210ENST00000572158 NCOA1Q15788 1441 aa14.74□□□□□ -0.05
TOM1L1-210ENST00000572158 ZFYVE16Q7Z3T8 1539 aa14.74□□□□□ -0.05
TOM1L1-210ENST00000572158 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
TOM1L1-210ENST00000572158 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
TOM1L1-210ENST00000572158 ADGRL2O95490 1459 aa14.73□□□□□ -0.05
TOM1L1-210ENST00000572158 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
TOM1L1-210ENST00000572158 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
TOM1L1-210ENST00000572158 MLH3Q9UHC1 1453 aa14.72□□□□□ -0.05
TOM1L1-210ENST00000572158 RRP7BPQ9NSQ0 103 aa14.71□□□□□ -0.05
TOM1L1-210ENST00000572158 ROCK1Q13464 1354 aa14.71□□□□□ -0.05
TOM1L1-210ENST00000572158 RTEL1-TNFRSF6BF6WH68 1400 aa14.71□□□□□ -0.05
TOM1L1-210ENST00000572158 ZMYM4Q5VZL5 1548 aa14.71□□□□□ -0.05
TOM1L1-210ENST00000572158 ADGBQ8N7X0 1667 aa14.71□□□□□ -0.06
TOM1L1-210ENST00000572158 ATP7AQ04656 1500 aa14.71□□□□□ -0.06
TOM1L1-210ENST00000572158 KDM6BO15054 1643 aa14.7□□□□□ -0.06
TOM1L1-210ENST00000572158 DMRT2Q9Y5R5 561 aa14.7□□□□□ -0.06
TOM1L1-210ENST00000572158 HECW2Q9P2P5 1572 aa14.69□□□□□ -0.06
TOM1L1-210ENST00000572158 NAIPQ13075 1403 aa14.69□□□□□ -0.06
TOM1L1-210ENST00000572158 YEATS2Q9ULM3 1422 aa14.69□□□□□ -0.06
TOM1L1-210ENST00000572158 PLXNC1O60486 1568 aa14.69□□□□□ -0.06
TOM1L1-210ENST00000572158 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
TOM1L1-210ENST00000572158 ANKRD30AQ9BXX3 1397 aa14.68□□□□□ -0.06
TOM1L1-210ENST00000572158 ABCA6Q8N139 1617 aa14.67□□□□□ -0.06
TOM1L1-210ENST00000572158 KIF15Q9NS87 1388 aa14.67□□□□□ -0.06
TOM1L1-210ENST00000572158 DIP2CQ9Y2E4 1556 aa14.65□□□□□ -0.06
TOM1L1-210ENST00000572158 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
TOM1L1-210ENST00000572158 MAGI2Q86UL8 1455 aa14.65□□□□□ -0.06
TOM1L1-210ENST00000572158 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
TOM1L1-210ENST00000572158 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
TOM1L1-210ENST00000572158 DUOX2Q9NRD8 1548 aa14.62□□□□□ -0.07
TOM1L1-210ENST00000572158 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
TOM1L1-210ENST00000572158 SIGLEC1Q9BZZ2 1709 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms