RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 MAP3K1Q13233 1512 aa36.12■■■■□ 3.37
SLC12A4-205ENST00000570616 FRMPD1Q5SYB0 1578 aa36.11■■■■□ 3.37
SLC12A4-205ENST00000570616 SCAPERQ9BY12 1400 aa36.07■■■■□ 3.36
SLC12A4-205ENST00000570616 CDC42BPBQ9Y5S2 1711 aa36.06■■■■□ 3.36
SLC12A4-205ENST00000570616 GPATCH8Q9UKJ3 1502 aaKnown RBP36.06■■■■□ 3.36
SLC12A4-205ENST00000570616 CDC42BPAQ5VT25 1732 aa36.04■■■■□ 3.36
SLC12A4-205ENST00000570616 CCNB3Q8WWL7 1395 aa36.03■■■■□ 3.36
SLC12A4-205ENST00000570616 POGZQ7Z3K3 1410 aa36.03■■■■□ 3.36
SLC12A4-205ENST00000570616 LRRC9Q6ZRR7 1453 aa36.03■■■■□ 3.36
SLC12A4-205ENST00000570616 RICTORQ6R327 1708 aa36.03■■■■□ 3.36
SLC12A4-205ENST00000570616 ZMYM4Q5VZL5 1548 aa35.98■■■■□ 3.35
SLC12A4-205ENST00000570616 NCOA2Q15596 1464 aa35.96■■■■□ 3.35
SLC12A4-205ENST00000570616 SUPT6HQ7KZ85 1726 aaKnown RBP35.96■■■■□ 3.35
SLC12A4-205ENST00000570616 ABCC1P33527 1531 aa35.95■■■■□ 3.35
SLC12A4-205ENST00000570616 ZNF518AQ6AHZ1 1483 aa35.92■■■■□ 3.34
SLC12A4-205ENST00000570616 APLP2Q06481 763 aa35.92■■■■□ 3.34
SLC12A4-205ENST00000570616 CFDP1Q9UEE9 299 aaPredicted RBP35.92■■■■□ 3.34
SLC12A4-205ENST00000570616 KANK4Q5T7N3 995 aaPredicted RBP35.91■■■■□ 3.34
SLC12A4-205ENST00000570616 MAGI2Q86UL8 1455 aa35.9■■■■□ 3.34
SLC12A4-205ENST00000570616 ARHGEF40Q8TER5 1519 aa35.89■■■■□ 3.34
SLC12A4-205ENST00000570616 ITSN2Q9NZM3 1697 aa35.89■■■■□ 3.34
SLC12A4-205ENST00000570616 SAMD9LQ8IVG5 1584 aa35.89■■■■□ 3.34
SLC12A4-205ENST00000570616 ARHGEF12Q9NZN5 1544 aa35.88■■■■□ 3.33
SLC12A4-205ENST00000570616 KDM5CP41229 1560 aa35.86■■■■□ 3.33
SLC12A4-205ENST00000570616 ZNF777Q9ULD5 760 aaPredicted RBP35.86■■■■□ 3.33
SLC12A4-205ENST00000570616 PLEKHH2Q8IVE3 1493 aa35.85■■■■□ 3.33
SLC12A4-205ENST00000570616 ZFYVE16Q7Z3T8 1539 aa35.84■■■■□ 3.33
SLC12A4-205ENST00000570616 KIAA1107Q9UPP5 1409 aa35.83■■■■□ 3.33
SLC12A4-205ENST00000570616 TRAPPC8Q9Y2L5 1435 aa35.83■■■■□ 3.33
SLC12A4-205ENST00000570616 AFAP1Q8N556 730 aa35.82■■■■□ 3.32
SLC12A4-205ENST00000570616 YEATS2Q9ULM3 1422 aa35.81■■■■□ 3.32
SLC12A4-205ENST00000570616 SYCP2Q9BX26 1530 aa35.8■■■■□ 3.32
SLC12A4-205ENST00000570616 KDM4FA0A1W2PPD8 638 aa35.78■■■■□ 3.32
SLC12A4-205ENST00000570616 HECW2Q9P2P5 1572 aa35.75■■■■□ 3.31
SLC12A4-205ENST00000570616 MLH3Q9UHC1 1453 aa35.73■■■■□ 3.31
SLC12A4-205ENST00000570616 ZNF644Q9H582 1327 aaPredicted RBP35.71■■■■□ 3.31
SLC12A4-205ENST00000570616 HNRNPMP52272 730 aaKnown RBP eCLIP35.7■■■■□ 3.31
SLC12A4-205ENST00000570616 MYOM3Q5VTT5 1437 aa35.68■■■■□ 3.3
SLC12A4-205ENST00000570616 CAMSAP2Q08AD1 1489 aa35.67■■■■□ 3.3
SLC12A4-205ENST00000570616 AEBP2Q6ZN18 517 aaPredicted RBP35.67■■■■□ 3.3
SLC12A4-205ENST00000570616 ATP10AO60312 1499 aa35.67■■■■□ 3.3
SLC12A4-205ENST00000570616 MBD5Q9P267 1494 aa35.67■■■■□ 3.3
SLC12A4-205ENST00000570616 C9orf84Q5VXU9 1444 aa35.65■■■■□ 3.3
SLC12A4-205ENST00000570616 MIA2Q96PC5 1412 aa35.65■■■■□ 3.3
SLC12A4-205ENST00000570616 MYT1LQ9UL68 1186 aa35.63■■■■□ 3.29
SLC12A4-205ENST00000570616 ARID4BQ4LE39 1312 aaPredicted RBP35.61■■■■□ 3.29
SLC12A4-205ENST00000570616 DIP2CQ9Y2E4 1556 aa35.61■■■■□ 3.29
SLC12A4-205ENST00000570616 SPAG9O60271 1321 aaKnown RBP35.6■■■■□ 3.29
SLC12A4-205ENST00000570616 ABCA6Q8N139 1617 aa35.58■■■■□ 3.29
SLC12A4-205ENST00000570616 KIDINS220Q9ULH0 1771 aa35.58■■■■□ 3.29
SLC12A4-205ENST00000570616 REREQ9P2R6 1566 aa35.56■■■■□ 3.28
SLC12A4-205ENST00000570616 CCDC141Q6ZP82 1450 aa35.55■■■■□ 3.28
SLC12A4-205ENST00000570616 ATP7AQ04656 1500 aa35.55■■■■□ 3.28
SLC12A4-205ENST00000570616 INO80Q9ULG1 1556 aaPredicted RBP35.55■■■■□ 3.28
SLC12A4-205ENST00000570616 SIGLEC1Q9BZZ2 1709 aa35.54■■■■□ 3.28
SLC12A4-205ENST00000570616 RSPH4AQ5TD94 716 aa35.54■■■■□ 3.28
SLC12A4-205ENST00000570616 BCORL1Q5H9F3 1711 aa35.53■■■■□ 3.28
SLC12A4-205ENST00000570616 ARHGEF5Q12774 1597 aa35.52■■■■□ 3.28
SLC12A4-205ENST00000570616 ADAMTSL3P82987 1691 aa35.51■■■■□ 3.28
SLC12A4-205ENST00000570616 RTEL1-TNFRSF6BF6WH68 1400 aa35.49■■■■□ 3.27
SLC12A4-205ENST00000570616 FGD6Q6ZV73 1430 aa35.48■■■■□ 3.27
SLC12A4-205ENST00000570616 AGLP35573 1532 aa35.45■■■■□ 3.27
SLC12A4-205ENST00000570616 PTPN23Q9H3S7 1636 aa35.42■■■■□ 3.26
SLC12A4-205ENST00000570616 TCOF1Q13428 1488 aaKnown RBP35.41■■■■□ 3.26
SLC12A4-205ENST00000570616 MADDQ8WXG6 1647 aa35.39■■■■□ 3.26
SLC12A4-205ENST00000570616 A2MP01023 1474 aa35.37■■■■□ 3.25
SLC12A4-205ENST00000570616 PLXNC1O60486 1568 aa35.36■■■■□ 3.25
SLC12A4-205ENST00000570616 TSPY4P0CV99 314 aa35.36■■■■□ 3.25
SLC12A4-205ENST00000570616 TSPY10P0CW01 314 aa35.36■■■■□ 3.25
SLC12A4-205ENST00000570616 MLECQ14165 292 aa35.36■■■■□ 3.25
SLC12A4-205ENST00000570616 PTPRMP28827 1452 aa35.34■■■■□ 3.25
SLC12A4-205ENST00000570616 MAST1Q9Y2H9 1570 aa35.33■■■■□ 3.25
SLC12A4-205ENST00000570616 ADGBQ8N7X0 1667 aa35.32■■■■□ 3.24
SLC12A4-205ENST00000570616 ABCC5O15440 1437 aa35.28■■■■□ 3.24
SLC12A4-205ENST00000570616 SHANK2Q9UPX8 1470 aa35.28■■■■□ 3.24
SLC12A4-205ENST00000570616 RIMS1Q86UR5 1692 aaKnown RBP35.26■■■■□ 3.23
SLC12A4-205ENST00000570616 DHX29Q7Z478 1369 aaKnown RBP35.25■■■■□ 3.23
SLC12A4-205ENST00000570616 DAPK1P53355 1430 aa35.25■■■■□ 3.23
SLC12A4-205ENST00000570616 DNMT1P26358 1616 aaKnown RBP35.24■■■■□ 3.23
SLC12A4-205ENST00000570616 FER1L4A9Z1Z3 1794 aa35.23■■■■□ 3.23
SLC12A4-205ENST00000570616 PPARGC1BQ86YN6 1023 aaKnown RBP35.23■■■■□ 3.23
SLC12A4-205ENST00000570616 CROCC2H7BZ55 1655 aa35.21■■■■□ 3.23
SLC12A4-205ENST00000570616 FAM50AQ14320 339 aaKnown RBP35.18■■■■□ 3.22
SLC12A4-205ENST00000570616 CNTLNQ9NXG0 1405 aa35.13■■■■□ 3.21
SLC12A4-205ENST00000570616 ESF1Q9H501 851 aaKnown RBP35.1■■■■□ 3.21
SLC12A4-205ENST00000570616 KIF15Q9NS87 1388 aa35.08■■■■□ 3.21
SLC12A4-205ENST00000570616 DUOX2Q9NRD8 1548 aa35.07■■■■□ 3.21
SLC12A4-205ENST00000570616 KIF3BO15066 747 aa35.07■■■■□ 3.2
SLC12A4-205ENST00000570616 GGT6Q6P531 493 aa35.07■■■■□ 3.2
SLC12A4-205ENST00000570616 PPP6R1Q9UPN7 881 aa35.07■■■■□ 3.2
SLC12A4-205ENST00000570616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.07■■■■□ 3.2
SLC12A4-205ENST00000570616 ANKRD30AQ9BXX3 1397 aa35.05■■■■□ 3.2
SLC12A4-205ENST00000570616 ADGRL2O95490 1459 aa35.03■■■■□ 3.2
SLC12A4-205ENST00000570616 EIF2AK4Q9P2K8 1649 aaKnown RBP35.02■■■■□ 3.2
SLC12A4-205ENST00000570616 NCOA1Q15788 1441 aa35.01■■■■□ 3.2
SLC12A4-205ENST00000570616 PLPPR3Q6T4P5 718 aa35.01■■■■□ 3.2
SLC12A4-205ENST00000570616 RRP7BPQ9NSQ0 103 aa35.01■■■■□ 3.2
SLC12A4-205ENST00000570616 ERBINQ96RT1 1412 aa35■■■■□ 3.19
SLC12A4-205ENST00000570616 RRBP1Q9P2E9 1410 aaKnown RBP35■■■■□ 3.19
SLC12A4-205ENST00000570616 CHIC2Q9UKJ5 165 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms