RNA–Protein interactions for RNA: ENST00000570193.5

PKD1-239, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-239ENST00000570193 RICTORQ6R327 1708 aa24.6■■□□□ 1.53
PKD1-239ENST00000570193 ARID4BQ4LE39 1312 aaPredicted RBP24.58■■□□□ 1.52
PKD1-239ENST00000570193 POGZQ7Z3K3 1410 aa24.56■■□□□ 1.52
PKD1-239ENST00000570193 ZNF777Q9ULD5 760 aaPredicted RBP24.53■■□□□ 1.52
PKD1-239ENST00000570193 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
PKD1-239ENST00000570193 CDC42BPBQ9Y5S2 1711 aa24.52■■□□□ 1.52
PKD1-239ENST00000570193 ZMYM4Q5VZL5 1548 aa24.52■■□□□ 1.52
PKD1-239ENST00000570193 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
PKD1-239ENST00000570193 VPS8Q8N3P4 1428 aa24.52■■□□□ 1.52
PKD1-239ENST00000570193 ARHGEF40Q8TER5 1519 aa24.51■■□□□ 1.51
PKD1-239ENST00000570193 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
PKD1-239ENST00000570193 ZFYVE16Q7Z3T8 1539 aa24.51■■□□□ 1.51
PKD1-239ENST00000570193 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
PKD1-239ENST00000570193 CCNB3Q8WWL7 1395 aa24.5■■□□□ 1.51
PKD1-239ENST00000570193 YEATS2Q9ULM3 1422 aa24.49■■□□□ 1.51
PKD1-239ENST00000570193 CDC42BPAQ5VT25 1732 aa24.48■■□□□ 1.51
PKD1-239ENST00000570193 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
PKD1-239ENST00000570193 GPATCH8Q9UKJ3 1502 aaKnown RBP24.48■■□□□ 1.51
PKD1-239ENST00000570193 EHBP1L1Q8N3D4 1523 aa24.47■■□□□ 1.51
PKD1-239ENST00000570193 CFDP1Q9UEE9 299 aaPredicted RBP24.47■■□□□ 1.51
PKD1-239ENST00000570193 ABCC1P33527 1531 aa24.43■■□□□ 1.5
PKD1-239ENST00000570193 TRAPPC8Q9Y2L5 1435 aa24.41■■□□□ 1.5
PKD1-239ENST00000570193 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
PKD1-239ENST00000570193 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
PKD1-239ENST00000570193 ATP10AO60312 1499 aa24.39■■□□□ 1.5
PKD1-239ENST00000570193 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.49
PKD1-239ENST00000570193 KDM5CP41229 1560 aa24.38■■□□□ 1.49
PKD1-239ENST00000570193 MLECQ14165 292 aa24.38■■□□□ 1.49
PKD1-239ENST00000570193 BCORL1Q5H9F3 1711 aa24.38■■□□□ 1.49
PKD1-239ENST00000570193 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
PKD1-239ENST00000570193 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
PKD1-239ENST00000570193 C9orf84Q5VXU9 1444 aa24.36■■□□□ 1.49
PKD1-239ENST00000570193 ADAMTSL3P82987 1691 aa24.36■■□□□ 1.49
PKD1-239ENST00000570193 HECW2Q9P2P5 1572 aa24.35■■□□□ 1.49
PKD1-239ENST00000570193 PLEKHH2Q8IVE3 1493 aa24.35■■□□□ 1.49
PKD1-239ENST00000570193 APLP2Q06481 763 aa24.35■■□□□ 1.49
PKD1-239ENST00000570193 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
PKD1-239ENST00000570193 MLH3Q9UHC1 1453 aa24.34■■□□□ 1.49
PKD1-239ENST00000570193 SYCP2Q9BX26 1530 aa24.34■■□□□ 1.49
PKD1-239ENST00000570193 SUPT6HQ7KZ85 1726 aaKnown RBP24.33■■□□□ 1.49
PKD1-239ENST00000570193 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
PKD1-239ENST00000570193 KIAA1107Q9UPP5 1409 aa24.32■■□□□ 1.48
PKD1-239ENST00000570193 SPAG9O60271 1321 aaKnown RBP24.32■■□□□ 1.48
PKD1-239ENST00000570193 ZNF644Q9H582 1327 aaPredicted RBP24.32■■□□□ 1.48
PKD1-239ENST00000570193 MADDQ8WXG6 1647 aa24.31■■□□□ 1.48
PKD1-239ENST00000570193 PTPRMP28827 1452 aa24.31■■□□□ 1.48
PKD1-239ENST00000570193 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
PKD1-239ENST00000570193 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
PKD1-239ENST00000570193 MAP3K1Q13233 1512 aa24.29■■□□□ 1.48
PKD1-239ENST00000570193 DIP2CQ9Y2E4 1556 aa24.28■■□□□ 1.48
PKD1-239ENST00000570193 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
PKD1-239ENST00000570193 ABCA6Q8N139 1617 aa24.26■■□□□ 1.47
PKD1-239ENST00000570193 RIMS1Q86UR5 1692 aaKnown RBP24.24■■□□□ 1.47
PKD1-239ENST00000570193 KIDINS220Q9ULH0 1771 aa24.23■■□□□ 1.47
PKD1-239ENST00000570193 REREQ9P2R6 1566 aa24.2■■□□□ 1.47
PKD1-239ENST00000570193 ATP7AQ04656 1500 aa24.19■■□□□ 1.46
PKD1-239ENST00000570193 CAMSAP2Q08AD1 1489 aa24.19■■□□□ 1.46
PKD1-239ENST00000570193 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
PKD1-239ENST00000570193 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
PKD1-239ENST00000570193 RSPH4AQ5TD94 716 aa24.16■■□□□ 1.46
PKD1-239ENST00000570193 ESF1Q9H501 851 aaKnown RBP24.16■■□□□ 1.46
PKD1-239ENST00000570193 AGLP35573 1532 aa24.15■■□□□ 1.46
PKD1-239ENST00000570193 INO80Q9ULG1 1556 aaPredicted RBP24.14■■□□□ 1.45
PKD1-239ENST00000570193 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
PKD1-239ENST00000570193 MYOM3Q5VTT5 1437 aa24.12■■□□□ 1.45
PKD1-239ENST00000570193 A2MP01023 1474 aa24.12■■□□□ 1.45
PKD1-239ENST00000570193 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
PKD1-239ENST00000570193 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
PKD1-239ENST00000570193 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
PKD1-239ENST00000570193 CEBPAP49715 358 aaPredicted RBP24.09■■□□□ 1.45
PKD1-239ENST00000570193 MIA2Q96PC5 1412 aa24.09■■□□□ 1.45
PKD1-239ENST00000570193 ARHGEF5Q12774 1597 aa24.04■■□□□ 1.44
PKD1-239ENST00000570193 GGT6Q6P531 493 aa24.04■■□□□ 1.44
PKD1-239ENST00000570193 ADGBQ8N7X0 1667 aa24.03■■□□□ 1.44
PKD1-239ENST00000570193 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
PKD1-239ENST00000570193 DHX29Q7Z478 1369 aaKnown RBP24.01■■□□□ 1.43
PKD1-239ENST00000570193 CNTLNQ9NXG0 1405 aa24.01■■□□□ 1.43
PKD1-239ENST00000570193 LMTK3Q96Q04 1460 aa24■■□□□ 1.43
PKD1-239ENST00000570193 KIF3BO15066 747 aa23.97■■□□□ 1.43
PKD1-239ENST00000570193 HSPA2P54652 639 aa23.96■■□□□ 1.43
PKD1-239ENST00000570193 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
PKD1-239ENST00000570193 PTPN23Q9H3S7 1636 aa23.95■■□□□ 1.42
PKD1-239ENST00000570193 C3P01024 1663 aa23.93■■□□□ 1.42
PKD1-239ENST00000570193 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
PKD1-239ENST00000570193 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
PKD1-239ENST00000570193 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
PKD1-239ENST00000570193 ABCC5O15440 1437 aa23.89■■□□□ 1.41
PKD1-239ENST00000570193 UHRF1BP1Q6BDS2 1440 aa23.89■■□□□ 1.41
PKD1-239ENST00000570193 CLTCQ00610 1675 aaKnown RBP23.89■■□□□ 1.41
PKD1-239ENST00000570193 TCOF1Q13428 1488 aaKnown RBP23.88■■□□□ 1.41
PKD1-239ENST00000570193 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
PKD1-239ENST00000570193 PREX1Q8TCU6 1659 aa23.88■■□□□ 1.41
PKD1-239ENST00000570193 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
PKD1-239ENST00000570193 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
PKD1-239ENST00000570193 DAPK1P53355 1430 aa23.85■■□□□ 1.41
PKD1-239ENST00000570193 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
PKD1-239ENST00000570193 SETD1BQ9UPS6 1966 aaKnown RBP23.85■■□□□ 1.41
PKD1-239ENST00000570193 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
PKD1-239ENST00000570193 SHANK2Q9UPX8 1470 aa23.83■■□□□ 1.41
PKD1-239ENST00000570193 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms