RNA–Protein interactions for RNA: ENST00000570193.5

PKD1-239, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-239ENST00000570193 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
PKD1-239ENST00000570193 CCDC180Q9P1Z9 1646 aa33.55■■■□□ 2.96
PKD1-239ENST00000570193 ABCC9O60706 1549 aa33.18■■■□□ 2.9
PKD1-239ENST00000570193 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
PKD1-239ENST00000570193 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.67
PKD1-239ENST00000570193 NACADO15069 1562 aa31.65■■■□□ 2.66
PKD1-239ENST00000570193 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
PKD1-239ENST00000570193 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
PKD1-239ENST00000570193 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.57
PKD1-239ENST00000570193 PABPN1Q86U42 306 aaKnown RBP eCLIP31.02■■■□□ 2.56
PKD1-239ENST00000570193 UNC13AQ9UPW8 1703 aa30.95■■■□□ 2.55
PKD1-239ENST00000570193 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
PKD1-239ENST00000570193 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
PKD1-239ENST00000570193 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
PKD1-239ENST00000570193 SHROOM4Q9ULL8 1493 aa30.41■■■□□ 2.46
PKD1-239ENST00000570193 EIF4G1Q04637 1599 aaKnown RBP30■■■□□ 2.39
PKD1-239ENST00000570193 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
PKD1-239ENST00000570193 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
PKD1-239ENST00000570193 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
PKD1-239ENST00000570193 BAZ1AQ9NRL2 1556 aaPredicted RBP29.24■■■□□ 2.27
PKD1-239ENST00000570193 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
PKD1-239ENST00000570193 ATAD2BQ9ULI0 1458 aa29.21■■■□□ 2.27
PKD1-239ENST00000570193 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
PKD1-239ENST00000570193 MROH2BQ7Z745 1585 aa29.06■■■□□ 2.24
PKD1-239ENST00000570193 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
PKD1-239ENST00000570193 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
PKD1-239ENST00000570193 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
PKD1-239ENST00000570193 WIZO95785 1651 aa28.73■■■□□ 2.19
PKD1-239ENST00000570193 RSF1Q96T23 1441 aaPredicted RBP28.66■■■□□ 2.18
PKD1-239ENST00000570193 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
PKD1-239ENST00000570193 NESP48681 1621 aa28.61■■■□□ 2.17
PKD1-239ENST00000570193 LAMC3Q9Y6N6 1575 aa28.48■■■□□ 2.15
PKD1-239ENST00000570193 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
PKD1-239ENST00000570193 CADPSQ9ULU8 1353 aa28.39■■■□□ 2.14
PKD1-239ENST00000570193 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
PKD1-239ENST00000570193 CUX2O14529 1486 aa28.34■■■□□ 2.13
PKD1-239ENST00000570193 KIF21AQ7Z4S6 1674 aa28.22■■■□□ 2.11
PKD1-239ENST00000570193 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
PKD1-239ENST00000570193 CFTRP13569 1480 aa28.14■■■□□ 2.09
PKD1-239ENST00000570193 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
PKD1-239ENST00000570193 FANCD2Q9BXW9 1451 aa28.07■■■□□ 2.08
PKD1-239ENST00000570193 CEP164Q9UPV0 1460 aa28.06■■■□□ 2.08
PKD1-239ENST00000570193 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
PKD1-239ENST00000570193 WDR62O43379 1518 aa27.92■■■□□ 2.06
PKD1-239ENST00000570193 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
PKD1-239ENST00000570193 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
PKD1-239ENST00000570193 DNAJC5Q9H3Z4 198 aa27.79■■■□□ 2.04
PKD1-239ENST00000570193 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
PKD1-239ENST00000570193 TOPBP1Q92547 1522 aa27.57■■■□□ 2
PKD1-239ENST00000570193 ABCC8Q09428 1581 aa27.57■■■□□ 2
PKD1-239ENST00000570193 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
PKD1-239ENST00000570193 IFT140Q96RY7 1462 aa27.47■■□□□ 1.99
PKD1-239ENST00000570193 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
PKD1-239ENST00000570193 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
PKD1-239ENST00000570193 CUX1P39880 1505 aa27.27■■□□□ 1.96
PKD1-239ENST00000570193 SOGA1O94964 1423 aa27.26■■□□□ 1.95
PKD1-239ENST00000570193 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
PKD1-239ENST00000570193 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
PKD1-239ENST00000570193 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
PKD1-239ENST00000570193 OSCARQ8IYS5 282 aa27.22■■□□□ 1.95
PKD1-239ENST00000570193 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
PKD1-239ENST00000570193 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.956e-6■■■■□ 25.1
PKD1-239ENST00000570193 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
PKD1-239ENST00000570193 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
PKD1-239ENST00000570193 FBLN2P98095 1184 aa27.03■■□□□ 1.92
PKD1-239ENST00000570193 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
PKD1-239ENST00000570193 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
PKD1-239ENST00000570193 SYNJ1O43426 1573 aa26.95■■□□□ 1.9
PKD1-239ENST00000570193 GRIN2BQ13224 1484 aa26.94■■□□□ 1.9
PKD1-239ENST00000570193 ABCA10Q8WWZ4 1543 aa26.94■■□□□ 1.9
PKD1-239ENST00000570193 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
PKD1-239ENST00000570193 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
PKD1-239ENST00000570193 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
PKD1-239ENST00000570193 CHD1O14646 1710 aa26.9■■□□□ 1.9
PKD1-239ENST00000570193 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
PKD1-239ENST00000570193 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
PKD1-239ENST00000570193 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
PKD1-239ENST00000570193 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
PKD1-239ENST00000570193 PBRM1Q86U86 1689 aa26.81■■□□□ 1.88
PKD1-239ENST00000570193 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
PKD1-239ENST00000570193 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
PKD1-239ENST00000570193 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
PKD1-239ENST00000570193 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
PKD1-239ENST00000570193 ARHGEF11O15085 1522 aa26.7■■□□□ 1.86
PKD1-239ENST00000570193 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
PKD1-239ENST00000570193 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
PKD1-239ENST00000570193 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
PKD1-239ENST00000570193 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
PKD1-239ENST00000570193 GRIN2AQ12879 1464 aa26.58■■□□□ 1.85
PKD1-239ENST00000570193 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
PKD1-239ENST00000570193 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
PKD1-239ENST00000570193 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
PKD1-239ENST00000570193 NUP160Q12769 1436 aa26.45■■□□□ 1.82
PKD1-239ENST00000570193 CEP170Q5SW79 1584 aa26.43■■□□□ 1.82
PKD1-239ENST00000570193 IGF1RP08069 1367 aa26.43■■□□□ 1.82
PKD1-239ENST00000570193 CUL7Q14999 1698 aa26.31■■□□□ 1.8
PKD1-239ENST00000570193 CARMIL1Q5VZK9 1371 aa26.29■■□□□ 1.8
PKD1-239ENST00000570193 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
PKD1-239ENST00000570193 ERCC6L2Q5T890 1561 aa26.24■■□□□ 1.79
PKD1-239ENST00000570193 SHROOM2Q13796 1616 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms