RNA–Protein interactions for RNA: ENST00000569997.1

COX4I1-217, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

Gene COX4I1, Length 3,946 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-217ENST00000569997 PTPRKQ15262 1439 aa13□□□□□ -0.33
COX4I1-217ENST00000569997 MRS2Q9HD23 443 aa13□□□□□ -0.33
COX4I1-217ENST00000569997 BCL11AQ9H165 835 aa13□□□□□ -0.33
COX4I1-217ENST00000569997 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
COX4I1-217ENST00000569997 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
COX4I1-217ENST00000569997 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
COX4I1-217ENST00000569997 SAMD9Q5K651 1589 aa12.96□□□□□ -0.34
COX4I1-217ENST00000569997 NUP155O75694 1391 aa12.95□□□□□ -0.34
COX4I1-217ENST00000569997 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
COX4I1-217ENST00000569997 UGGT2Q9NYU1 1516 aa12.95□□□□□ -0.34
COX4I1-217ENST00000569997 PTPRGP23470 1445 aa12.95□□□□□ -0.34
COX4I1-217ENST00000569997 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
COX4I1-217ENST00000569997 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■■■■□ 22.9
COX4I1-217ENST00000569997 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
COX4I1-217ENST00000569997 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
COX4I1-217ENST00000569997 TARBP1Q13395 1621 aaKnown RBP12.93□□□□□ -0.34
COX4I1-217ENST00000569997 DAPK1P53355 1430 aa12.93□□□□□ -0.34
COX4I1-217ENST00000569997 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
COX4I1-217ENST00000569997 MAGI1Q96QZ7 1491 aaPredicted RBP12.92□□□□□ -0.34
COX4I1-217ENST00000569997 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
COX4I1-217ENST00000569997 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
COX4I1-217ENST00000569997 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
COX4I1-217ENST00000569997 PLB1Q6P1J6 1458 aa12.89□□□□□ -0.35
COX4I1-217ENST00000569997 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
COX4I1-217ENST00000569997 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
COX4I1-217ENST00000569997 ERICH6Q7L0X2 663 aa12.88□□□□□ -0.35
COX4I1-217ENST00000569997 ABCC5O15440 1437 aa12.88□□□□□ -0.35
COX4I1-217ENST00000569997 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
COX4I1-217ENST00000569997 AKNAQ7Z591 1439 aa12.87□□□□□ -0.35
COX4I1-217ENST00000569997 WDR62O43379 1518 aa12.87□□□□□ -0.35
COX4I1-217ENST00000569997 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
COX4I1-217ENST00000569997 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
COX4I1-217ENST00000569997 ANKRD50Q9ULJ7 1429 aa12.86□□□□□ -0.35
COX4I1-217ENST00000569997 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
COX4I1-217ENST00000569997 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
COX4I1-217ENST00000569997 MAGI3Q5TCQ9 1506 aa12.84□□□□□ -0.35
COX4I1-217ENST00000569997 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.35
COX4I1-217ENST00000569997 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
COX4I1-217ENST00000569997 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
COX4I1-217ENST00000569997 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
COX4I1-217ENST00000569997 ANKRD30BQ9BXX2 1392 aa12.83□□□□□ -0.36
COX4I1-217ENST00000569997 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
COX4I1-217ENST00000569997 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
COX4I1-217ENST00000569997 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
COX4I1-217ENST00000569997 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
COX4I1-217ENST00000569997 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
COX4I1-217ENST00000569997 CAMSAP2Q08AD1 1489 aa12.81□□□□□ -0.36
COX4I1-217ENST00000569997 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
COX4I1-217ENST00000569997 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
COX4I1-217ENST00000569997 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
COX4I1-217ENST00000569997 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
COX4I1-217ENST00000569997 USP47Q96K76 1375 aa12.79□□□□□ -0.36
COX4I1-217ENST00000569997 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
COX4I1-217ENST00000569997 GPATCH8Q9UKJ3 1502 aaKnown RBP12.78□□□□□ -0.36
COX4I1-217ENST00000569997 CNTLNQ9NXG0 1405 aa12.78□□□□□ -0.36
COX4I1-217ENST00000569997 ROCK2O75116 1388 aaKnown RBP12.77□□□□□ -0.36
COX4I1-217ENST00000569997 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
COX4I1-217ENST00000569997 ARHGEF11O15085 1522 aa12.76□□□□□ -0.37
COX4I1-217ENST00000569997 RPRD2Q5VT52 1461 aaKnown RBP12.75□□□□□ -0.37
COX4I1-217ENST00000569997 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
COX4I1-217ENST00000569997 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
COX4I1-217ENST00000569997 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
COX4I1-217ENST00000569997 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
COX4I1-217ENST00000569997 NUP160Q12769 1436 aa12.73□□□□□ -0.37
COX4I1-217ENST00000569997 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
COX4I1-217ENST00000569997 ATP10BO94823 1461 aa12.73□□□□□ -0.37
COX4I1-217ENST00000569997 SPAG9O60271 1321 aaKnown RBP12.72□□□□□ -0.37
COX4I1-217ENST00000569997 KIF14Q15058 1648 aa12.71□□□□□ -0.37
COX4I1-217ENST00000569997 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
COX4I1-217ENST00000569997 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
COX4I1-217ENST00000569997 TMF1P82094 1093 aa12.7□□□□□ -0.38
COX4I1-217ENST00000569997 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
COX4I1-217ENST00000569997 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
COX4I1-217ENST00000569997 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
COX4I1-217ENST00000569997 ARID4BQ4LE39 1312 aaPredicted RBP12.69□□□□□ -0.38
COX4I1-217ENST00000569997 RALBP1Q15311 655 aa12.68□□□□□ -0.38
COX4I1-217ENST00000569997 CCDC136Q96JN2 1154 aa12.68□□□□□ -0.38
COX4I1-217ENST00000569997 KANK1Q14678 1352 aa12.68□□□□□ -0.38
COX4I1-217ENST00000569997 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
COX4I1-217ENST00000569997 CDCA8Q53HL2 280 aa12.67□□□□□ -0.38
COX4I1-217ENST00000569997 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
COX4I1-217ENST00000569997 ITSN2Q9NZM3 1697 aa12.67□□□□□ -0.38
COX4I1-217ENST00000569997 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
COX4I1-217ENST00000569997 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
COX4I1-217ENST00000569997 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
COX4I1-217ENST00000569997 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
COX4I1-217ENST00000569997 KNSTRNQ9Y448 316 aa12.66□□□□□ -0.38
COX4I1-217ENST00000569997 KIF3BO15066 747 aa12.65□□□□□ -0.38
COX4I1-217ENST00000569997 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
COX4I1-217ENST00000569997 KDM6BO15054 1643 aa12.65□□□□□ -0.38
COX4I1-217ENST00000569997 LRRIQ1Q96JM4 1722 aa12.65□□□□□ -0.39
COX4I1-217ENST00000569997 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
COX4I1-217ENST00000569997 PLEKHH2Q8IVE3 1493 aa12.64□□□□□ -0.39
COX4I1-217ENST00000569997 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
COX4I1-217ENST00000569997 PZPP20742 1482 aa12.63□□□□□ -0.39
COX4I1-217ENST00000569997 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
COX4I1-217ENST00000569997 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
COX4I1-217ENST00000569997 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
COX4I1-217ENST00000569997 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
COX4I1-217ENST00000569997 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms