RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
GTF3C1-210ENST00000569394 NEO1Q92859 1461 aa14.27□□□□□ -0.12
GTF3C1-210ENST00000569394 EFCAB2Q5VUJ9 269 aa14.27□□□□□ -0.13
GTF3C1-210ENST00000569394 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
GTF3C1-210ENST00000569394 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
GTF3C1-210ENST00000569394 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
GTF3C1-210ENST00000569394 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
GTF3C1-210ENST00000569394 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
GTF3C1-210ENST00000569394 ILDR1Q86SU0 546 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-210ENST00000569394 CFAP74Q9C0B2 1584 aa14.24□□□□□ -0.13
GTF3C1-210ENST00000569394 DENND4BO75064 1496 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-210ENST00000569394 CDC42BPAQ5VT25 1732 aa14.23□□□□□ -0.13
GTF3C1-210ENST00000569394 FRMPD1Q5SYB0 1578 aa14.22□□□□□ -0.13
GTF3C1-210ENST00000569394 ARID4BQ4LE39 1312 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-210ENST00000569394 APLP2Q06481 763 aa14.22□□□□□ -0.13
GTF3C1-210ENST00000569394 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
GTF3C1-210ENST00000569394 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-210ENST00000569394 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
GTF3C1-210ENST00000569394 CCNB3Q8WWL7 1395 aa14.21□□□□□ -0.14
GTF3C1-210ENST00000569394 PREX2Q70Z35 1606 aa14.2□□□□□ -0.14
GTF3C1-210ENST00000569394 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-210ENST00000569394 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
GTF3C1-210ENST00000569394 RICTORQ6R327 1708 aa14.2□□□□□ -0.14
GTF3C1-210ENST00000569394 HNRNPMP52272 730 aaKnown RBP eCLIP14.19□□□□□ -0.14
GTF3C1-210ENST00000569394 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
GTF3C1-210ENST00000569394 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
GTF3C1-210ENST00000569394 GPATCH8Q9UKJ3 1502 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-210ENST00000569394 ZNF644Q9H582 1327 aaPredicted RBP14.17□□□□□ -0.14
GTF3C1-210ENST00000569394 MLECQ14165 292 aa14.17□□□□□ -0.14
GTF3C1-210ENST00000569394 PPARGC1BQ86YN6 1023 aaKnown RBP14.17□□□□□ -0.14
GTF3C1-210ENST00000569394 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
GTF3C1-210ENST00000569394 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
GTF3C1-210ENST00000569394 NCOA2Q15596 1464 aa14.15□□□□□ -0.14
GTF3C1-210ENST00000569394 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
GTF3C1-210ENST00000569394 ARHGEF12Q9NZN5 1544 aa14.15□□□□□ -0.14
GTF3C1-210ENST00000569394 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
GTF3C1-210ENST00000569394 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
GTF3C1-210ENST00000569394 LRRC9Q6ZRR7 1453 aa14.14□□□□□ -0.15
GTF3C1-210ENST00000569394 ZFYVE16Q7Z3T8 1539 aa14.13□□□□□ -0.15
GTF3C1-210ENST00000569394 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
GTF3C1-210ENST00000569394 ABCC1P33527 1531 aa14.12□□□□□ -0.15
GTF3C1-210ENST00000569394 SYCP2Q9BX26 1530 aa14.12□□□□□ -0.15
GTF3C1-210ENST00000569394 ARHGEF40Q8TER5 1519 aa14.1□□□□□ -0.15
GTF3C1-210ENST00000569394 ZNF518AQ6AHZ1 1483 aa14.1□□□□□ -0.15
GTF3C1-210ENST00000569394 SIGLEC1Q9BZZ2 1709 aa14.09□□□□□ -0.15
GTF3C1-210ENST00000569394 ZMYM4Q5VZL5 1548 aa14.09□□□□□ -0.15
GTF3C1-210ENST00000569394 SPAG9O60271 1321 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-210ENST00000569394 HECW2Q9P2P5 1572 aa14.06□□□□□ -0.16
GTF3C1-210ENST00000569394 ATP10AO60312 1499 aa14.05□□□□□ -0.16
GTF3C1-210ENST00000569394 KDM5CP41229 1560 aa14.05□□□□□ -0.16
GTF3C1-210ENST00000569394 ABCA6Q8N139 1617 aa14.04□□□□□ -0.16
GTF3C1-210ENST00000569394 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
GTF3C1-210ENST00000569394 MAGI2Q86UL8 1455 aa14.04□□□□□ -0.16
GTF3C1-210ENST00000569394 MAP3K1Q13233 1512 aa14.04□□□□□ -0.16
GTF3C1-210ENST00000569394 BCORL1Q5H9F3 1711 aa14.04□□□□□ -0.16
GTF3C1-210ENST00000569394 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
GTF3C1-210ENST00000569394 DIP2CQ9Y2E4 1556 aa14.03□□□□□ -0.16
GTF3C1-210ENST00000569394 MADDQ8WXG6 1647 aa14.03□□□□□ -0.16
GTF3C1-210ENST00000569394 KIDINS220Q9ULH0 1771 aa14.03□□□□□ -0.16
GTF3C1-210ENST00000569394 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
GTF3C1-210ENST00000569394 RIMS1Q86UR5 1692 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-210ENST00000569394 MLH3Q9UHC1 1453 aa14□□□□□ -0.17
GTF3C1-210ENST00000569394 KIAA1107Q9UPP5 1409 aa14□□□□□ -0.17
GTF3C1-210ENST00000569394 ADAMTSL3P82987 1691 aa14□□□□□ -0.17
GTF3C1-210ENST00000569394 MYOM3Q5VTT5 1437 aa13.99□□□□□ -0.17
GTF3C1-210ENST00000569394 FAM50AQ14320 339 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-210ENST00000569394 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
GTF3C1-210ENST00000569394 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
GTF3C1-210ENST00000569394 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
GTF3C1-210ENST00000569394 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
GTF3C1-210ENST00000569394 CEBPAP49715 358 aaPredicted RBP13.97□□□□□ -0.17
GTF3C1-210ENST00000569394 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.17
GTF3C1-210ENST00000569394 PTPRMP28827 1452 aa13.96□□□□□ -0.17
GTF3C1-210ENST00000569394 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
GTF3C1-210ENST00000569394 GGT6Q6P531 493 aa13.96□□□□□ -0.17
GTF3C1-210ENST00000569394 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.17
GTF3C1-210ENST00000569394 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.18
GTF3C1-210ENST00000569394 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
GTF3C1-210ENST00000569394 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
GTF3C1-210ENST00000569394 ITGAEP38570 1179 aa13.93□□□□□ -0.18
GTF3C1-210ENST00000569394 A2MP01023 1474 aa13.93□□□□□ -0.18
GTF3C1-210ENST00000569394 FGD6Q6ZV73 1430 aa13.92□□□□□ -0.18
GTF3C1-210ENST00000569394 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
GTF3C1-210ENST00000569394 KIF3BO15066 747 aa13.91□□□□□ -0.18
GTF3C1-210ENST00000569394 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
GTF3C1-210ENST00000569394 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
GTF3C1-210ENST00000569394 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-210ENST00000569394 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
GTF3C1-210ENST00000569394 ARHGEF5Q12774 1597 aa13.9□□□□□ -0.18
GTF3C1-210ENST00000569394 FBXO41Q8TF61 875 aa13.89□□□□□ -0.19
GTF3C1-210ENST00000569394 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
GTF3C1-210ENST00000569394 RTEL1-TNFRSF6BF6WH68 1400 aa13.88□□□□□ -0.19
GTF3C1-210ENST00000569394 ABCC5O15440 1437 aa13.88□□□□□ -0.19
GTF3C1-210ENST00000569394 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-210ENST00000569394 AGLP35573 1532 aa13.86□□□□□ -0.19
GTF3C1-210ENST00000569394 HSPA2P54652 639 aa13.86□□□□□ -0.19
GTF3C1-210ENST00000569394 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-210ENST00000569394 DAPK1P53355 1430 aa13.86□□□□□ -0.19
GTF3C1-210ENST00000569394 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-210ENST00000569394 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms