RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 CDC42BPBQ9Y5S2 1711 aa18.59■□□□□ 0.57
FANCA-231ENST00000568626 ARHGAP5Q13017 1502 aa18.59■□□□□ 0.57
FANCA-231ENST00000568626 MYOM3Q5VTT5 1437 aa18.58■□□□□ 0.57
FANCA-231ENST00000568626 NEO1Q92859 1461 aa18.58■□□□□ 0.56
FANCA-231ENST00000568626 FANCAO15360 1455 aa18.56■□□□□ 0.56
FANCA-231ENST00000568626 MIA2Q96PC5 1412 aa18.56■□□□□ 0.56
FANCA-231ENST00000568626 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
FANCA-231ENST00000568626 EFCAB2Q5VUJ9 269 aa18.52■□□□□ 0.56
FANCA-231ENST00000568626 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.56
FANCA-231ENST00000568626 PLEKHH2Q8IVE3 1493 aa18.51■□□□□ 0.55
FANCA-231ENST00000568626 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
FANCA-231ENST00000568626 SAMD9LQ8IVG5 1584 aa18.5■□□□□ 0.55
FANCA-231ENST00000568626 ABCC1P33527 1531 aa18.49■□□□□ 0.55
FANCA-231ENST00000568626 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
FANCA-231ENST00000568626 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
FANCA-231ENST00000568626 PTPN23Q9H3S7 1636 aa18.48■□□□□ 0.55
FANCA-231ENST00000568626 ADGRL1O94910 1474 aa18.47■□□□□ 0.55
FANCA-231ENST00000568626 CAMSAP2Q08AD1 1489 aa18.47■□□□□ 0.55
FANCA-231ENST00000568626 TCOF1Q13428 1488 aaKnown RBP18.46■□□□□ 0.55
FANCA-231ENST00000568626 KDM6BO15054 1643 aa18.46■□□□□ 0.55
FANCA-231ENST00000568626 KIAA1107Q9UPP5 1409 aa18.46■□□□□ 0.55
FANCA-231ENST00000568626 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
FANCA-231ENST00000568626 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
FANCA-231ENST00000568626 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
FANCA-231ENST00000568626 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
FANCA-231ENST00000568626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
FANCA-231ENST00000568626 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
FANCA-231ENST00000568626 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
FANCA-231ENST00000568626 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
FANCA-231ENST00000568626 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.54
FANCA-231ENST00000568626 RICTORQ6R327 1708 aa18.39■□□□□ 0.53
FANCA-231ENST00000568626 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
FANCA-231ENST00000568626 MBD5Q9P267 1494 aa18.38■□□□□ 0.53
FANCA-231ENST00000568626 ARHGEF12Q9NZN5 1544 aa18.38■□□□□ 0.53
FANCA-231ENST00000568626 KDM5CP41229 1560 aa18.37■□□□□ 0.53
FANCA-231ENST00000568626 DNMT1P26358 1616 aaKnown RBP18.37■□□□□ 0.53
FANCA-231ENST00000568626 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
FANCA-231ENST00000568626 RSPH4AQ5TD94 716 aa18.36■□□□□ 0.53
FANCA-231ENST00000568626 ZMYM4Q5VZL5 1548 aa18.36■□□□□ 0.53
FANCA-231ENST00000568626 ZNF644Q9H582 1327 aaPredicted RBP18.36■□□□□ 0.53
FANCA-231ENST00000568626 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
FANCA-231ENST00000568626 SHANK2Q9UPX8 1470 aa18.34■□□□□ 0.53
FANCA-231ENST00000568626 KDM4FA0A1W2PPD8 638 aa18.34■□□□□ 0.53
FANCA-231ENST00000568626 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.53
FANCA-231ENST00000568626 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.53
FANCA-231ENST00000568626 HECW2Q9P2P5 1572 aa18.33■□□□□ 0.52
FANCA-231ENST00000568626 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
FANCA-231ENST00000568626 DAPK1P53355 1430 aa18.32■□□□□ 0.52
FANCA-231ENST00000568626 MAST1Q9Y2H9 1570 aa18.31■□□□□ 0.52
FANCA-231ENST00000568626 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
FANCA-231ENST00000568626 INO80Q9ULG1 1556 aaPredicted RBP18.3■□□□□ 0.52
FANCA-231ENST00000568626 HNRNPMP52272 730 aaKnown RBP eCLIP18.3■□□□□ 0.52
FANCA-231ENST00000568626 MLH3Q9UHC1 1453 aa18.3■□□□□ 0.52
FANCA-231ENST00000568626 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
FANCA-231ENST00000568626 ABCC5O15440 1437 aa18.29■□□□□ 0.52
FANCA-231ENST00000568626 RAPGEF3O95398 923 aa18.28■□□□□ 0.52
FANCA-231ENST00000568626 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
FANCA-231ENST00000568626 RTEL1-TNFRSF6BF6WH68 1400 aa18.27■□□□□ 0.52
FANCA-231ENST00000568626 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
FANCA-231ENST00000568626 ADGBQ8N7X0 1667 aa18.27■□□□□ 0.52
FANCA-231ENST00000568626 AFAP1Q8N556 730 aa18.26■□□□□ 0.51
FANCA-231ENST00000568626 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
FANCA-231ENST00000568626 PLXNC1O60486 1568 aa18.25■□□□□ 0.51
FANCA-231ENST00000568626 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
FANCA-231ENST00000568626 TSPY4P0CV99 314 aa18.25■□□□□ 0.51
FANCA-231ENST00000568626 TSPY10P0CW01 314 aa18.25■□□□□ 0.51
FANCA-231ENST00000568626 KIDINS220Q9ULH0 1771 aa18.25■□□□□ 0.51
FANCA-231ENST00000568626 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
FANCA-231ENST00000568626 ABCA6Q8N139 1617 aa18.21■□□□□ 0.51
FANCA-231ENST00000568626 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
FANCA-231ENST00000568626 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
FANCA-231ENST00000568626 REREQ9P2R6 1566 aa18.2■□□□□ 0.5
FANCA-231ENST00000568626 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
FANCA-231ENST00000568626 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
FANCA-231ENST00000568626 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
FANCA-231ENST00000568626 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
FANCA-231ENST00000568626 NCOA1Q15788 1441 aa18.16■□□□□ 0.5
FANCA-231ENST00000568626 ATP10AO60312 1499 aa18.15■□□□□ 0.5
FANCA-231ENST00000568626 DUOX2Q9NRD8 1548 aa18.15■□□□□ 0.5
FANCA-231ENST00000568626 ITGAEP38570 1179 aa18.15■□□□□ 0.5
FANCA-231ENST00000568626 TRIM26Q12899 539 aaPredicted RBP18.15■□□□□ 0.5
FANCA-231ENST00000568626 KIF15Q9NS87 1388 aa18.14■□□□□ 0.49
FANCA-231ENST00000568626 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
FANCA-231ENST00000568626 A2MP01023 1474 aa18.13■□□□□ 0.49
FANCA-231ENST00000568626 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
FANCA-231ENST00000568626 CHIC2Q9UKJ5 165 aa18.11■□□□□ 0.49
FANCA-231ENST00000568626 ERBINQ96RT1 1412 aa18.11■□□□□ 0.49
FANCA-231ENST00000568626 AGLP35573 1532 aa18.1■□□□□ 0.49
FANCA-231ENST00000568626 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
FANCA-231ENST00000568626 BCORL1Q5H9F3 1711 aa18.09■□□□□ 0.49
FANCA-231ENST00000568626 DHX29Q7Z478 1369 aaKnown RBP18.09■□□□□ 0.49
FANCA-231ENST00000568626 NAIPQ13075 1403 aa18.06■□□□□ 0.48
FANCA-231ENST00000568626 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
FANCA-231ENST00000568626 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
FANCA-231ENST00000568626 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
FANCA-231ENST00000568626 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
FANCA-231ENST00000568626 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
FANCA-231ENST00000568626 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
FANCA-231ENST00000568626 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
FANCA-231ENST00000568626 UNC13BO14795 1591 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms