RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
TMEM170A-205ENST00000568559 RGL3Q3MIN7 710 aa17.08■□□□□ 0.32
TMEM170A-205ENST00000568559 SUPT6HQ7KZ85 1726 aaKnown RBP17.07■□□□□ 0.32
TMEM170A-205ENST00000568559 PKD2Q13563 968 aa17.07■□□□□ 0.32
TMEM170A-205ENST00000568559 NUP155O75694 1391 aa17.07■□□□□ 0.32
TMEM170A-205ENST00000568559 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
TMEM170A-205ENST00000568559 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
TMEM170A-205ENST00000568559 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
TMEM170A-205ENST00000568559 MIA2Q96PC5 1412 aa17.06■□□□□ 0.32
TMEM170A-205ENST00000568559 RAPGEF6Q8TEU7 1601 aa17.05■□□□□ 0.32
TMEM170A-205ENST00000568559 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
TMEM170A-205ENST00000568559 GGT6Q6P531 493 aa17.04■□□□□ 0.32
TMEM170A-205ENST00000568559 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
TMEM170A-205ENST00000568559 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
TMEM170A-205ENST00000568559 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
TMEM170A-205ENST00000568559 ATP10BO94823 1461 aa17.03■□□□□ 0.32
TMEM170A-205ENST00000568559 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
TMEM170A-205ENST00000568559 KIF3BO15066 747 aa17.02■□□□□ 0.32
TMEM170A-205ENST00000568559 ARHGEF11O15085 1522 aa17.02■□□□□ 0.31
TMEM170A-205ENST00000568559 AFAP1Q8N556 730 aa17.01■□□□□ 0.31
TMEM170A-205ENST00000568559 BCANQ96GW7 911 aa16.99■□□□□ 0.31
TMEM170A-205ENST00000568559 MLECQ14165 292 aa16.98■□□□□ 0.31
TMEM170A-205ENST00000568559 KANK1Q14678 1352 aa16.98■□□□□ 0.31
TMEM170A-205ENST00000568559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.97■□□□□ 0.31
TMEM170A-205ENST00000568559 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
TMEM170A-205ENST00000568559 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
TMEM170A-205ENST00000568559 CHD1O14646 1710 aa16.94■□□□□ 0.3
TMEM170A-205ENST00000568559 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
TMEM170A-205ENST00000568559 DAPK1P53355 1430 aa16.93■□□□□ 0.3
TMEM170A-205ENST00000568559 KIF14Q15058 1648 aa16.92■□□□□ 0.3
TMEM170A-205ENST00000568559 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
TMEM170A-205ENST00000568559 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
TMEM170A-205ENST00000568559 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
TMEM170A-205ENST00000568559 PTPN23Q9H3S7 1636 aa16.91■□□□□ 0.3
TMEM170A-205ENST00000568559 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
TMEM170A-205ENST00000568559 ANP32CO43423 234 aa16.9■□□□□ 0.3
TMEM170A-205ENST00000568559 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
TMEM170A-205ENST00000568559 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.3
TMEM170A-205ENST00000568559 HFM1A2PYH4 1435 aa16.89■□□□□ 0.3
TMEM170A-205ENST00000568559 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
TMEM170A-205ENST00000568559 CAMSAP2Q08AD1 1489 aa16.88■□□□□ 0.29
TMEM170A-205ENST00000568559 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
TMEM170A-205ENST00000568559 ABCC5O15440 1437 aa16.87■□□□□ 0.29
TMEM170A-205ENST00000568559 MYT1Q01538 1121 aa16.86■□□□□ 0.29
TMEM170A-205ENST00000568559 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
TMEM170A-205ENST00000568559 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
TMEM170A-205ENST00000568559 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
TMEM170A-205ENST00000568559 NAIPQ13075 1403 aa16.85■□□□□ 0.29
TMEM170A-205ENST00000568559 WASHC2CQ9Y4E1 1318 aa16.85■□□□□ 0.29
TMEM170A-205ENST00000568559 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
TMEM170A-205ENST00000568559 NEFLP07196 543 aa16.85■□□□□ 0.29
TMEM170A-205ENST00000568559 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
TMEM170A-205ENST00000568559 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
TMEM170A-205ENST00000568559 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
TMEM170A-205ENST00000568559 CD109Q6YHK3 1445 aa16.84■□□□□ 0.29
TMEM170A-205ENST00000568559 ASXL2Q76L83 1435 aa16.84■□□□□ 0.29
TMEM170A-205ENST00000568559 CARD11Q9BXL7 1154 aa16.84■□□□□ 0.29
TMEM170A-205ENST00000568559 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
TMEM170A-205ENST00000568559 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
TMEM170A-205ENST00000568559 PTPRKQ15262 1439 aa16.81■□□□□ 0.28
TMEM170A-205ENST00000568559 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
TMEM170A-205ENST00000568559 ROCK1Q13464 1354 aa16.8■□□□□ 0.28
TMEM170A-205ENST00000568559 CCDC141Q6ZP82 1450 aa16.79■□□□□ 0.28
TMEM170A-205ENST00000568559 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
TMEM170A-205ENST00000568559 ABCA8O94911 1581 aa16.77■□□□□ 0.28
TMEM170A-205ENST00000568559 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
TMEM170A-205ENST00000568559 PLCH2O75038 1416 aa16.76■□□□□ 0.27
TMEM170A-205ENST00000568559 NCOA1Q15788 1441 aa16.76■□□□□ 0.27
TMEM170A-205ENST00000568559 FANCAO15360 1455 aa16.75■□□□□ 0.27
TMEM170A-205ENST00000568559 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
TMEM170A-205ENST00000568559 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
TMEM170A-205ENST00000568559 MIER1Q8N108 512 aa16.73■□□□□ 0.27
TMEM170A-205ENST00000568559 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
TMEM170A-205ENST00000568559 TCOF1Q13428 1488 aaKnown RBP16.71■□□□□ 0.27
TMEM170A-205ENST00000568559 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
TMEM170A-205ENST00000568559 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
TMEM170A-205ENST00000568559 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
TMEM170A-205ENST00000568559 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
TMEM170A-205ENST00000568559 SYCP2Q9BX26 1530 aa16.66■□□□□ 0.26
TMEM170A-205ENST00000568559 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
TMEM170A-205ENST00000568559 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
TMEM170A-205ENST00000568559 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
TMEM170A-205ENST00000568559 KIAA1107Q9UPP5 1409 aa16.64■□□□□ 0.25
TMEM170A-205ENST00000568559 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
TMEM170A-205ENST00000568559 ROCK2O75116 1388 aaKnown RBP16.63■□□□□ 0.25
TMEM170A-205ENST00000568559 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
TMEM170A-205ENST00000568559 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
TMEM170A-205ENST00000568559 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
TMEM170A-205ENST00000568559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.59■□□□□ 0.256e-6■■■■□ 21.5
TMEM170A-205ENST00000568559 TMC1Q8TDI8 760 aa16.57■□□□□ 0.24
TMEM170A-205ENST00000568559 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
TMEM170A-205ENST00000568559 POGKQ9P215 609 aa16.56■□□□□ 0.24
TMEM170A-205ENST00000568559 STK26Q9P289 416 aa16.56■□□□□ 0.24
TMEM170A-205ENST00000568559 CDCA8Q53HL2 280 aa16.55■□□□□ 0.24
TMEM170A-205ENST00000568559 ZCCHC11Q5TAX3 1644 aaKnown RBP16.55■□□□□ 0.24
TMEM170A-205ENST00000568559 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
TMEM170A-205ENST00000568559 DNMT1P26358 1616 aaKnown RBP16.55■□□□□ 0.24
TMEM170A-205ENST00000568559 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
TMEM170A-205ENST00000568559 TMF1P82094 1093 aa16.54■□□□□ 0.24
TMEM170A-205ENST00000568559 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms