RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 NUP160Q12769 1436 aa23.85■■□□□ 1.41
VAC14-210ENST00000568548 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
VAC14-210ENST00000568548 C11orf95C9JLR9 678 aaPredicted RBP23.83■■□□□ 1.4
VAC14-210ENST00000568548 ARHGEF11O15085 1522 aa23.82■■□□□ 1.4
VAC14-210ENST00000568548 NAIPQ13075 1403 aa23.79■■□□□ 1.4
VAC14-210ENST00000568548 NUP153P49790 1475 aaKnown RBP23.79■■□□□ 1.4
VAC14-210ENST00000568548 RAPGEF6Q8TEU7 1601 aa23.79■■□□□ 1.4
VAC14-210ENST00000568548 L3MBTL2Q969R5 705 aa23.78■■□□□ 1.4
VAC14-210ENST00000568548 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
VAC14-210ENST00000568548 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
VAC14-210ENST00000568548 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
VAC14-210ENST00000568548 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
VAC14-210ENST00000568548 MSH5O43196 834 aa23.74■■□□□ 1.39
VAC14-210ENST00000568548 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
VAC14-210ENST00000568548 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
VAC14-210ENST00000568548 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
VAC14-210ENST00000568548 MPHOSPH9Q99550 1183 aa23.72■■□□□ 1.39
VAC14-210ENST00000568548 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
VAC14-210ENST00000568548 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.39
VAC14-210ENST00000568548 B4GALNT3Q6L9W6 998 aa23.69■■□□□ 1.38
VAC14-210ENST00000568548 MRS2Q9HD23 443 aa23.69■■□□□ 1.38
VAC14-210ENST00000568548 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
VAC14-210ENST00000568548 TCOF1Q13428 1488 aaKnown RBP23.67■■□□□ 1.38
VAC14-210ENST00000568548 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
VAC14-210ENST00000568548 ERICH6Q7L0X2 663 aa23.66■■□□□ 1.38
VAC14-210ENST00000568548 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
VAC14-210ENST00000568548 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
VAC14-210ENST00000568548 CHD1O14646 1710 aa23.62■■□□□ 1.37
VAC14-210ENST00000568548 ZNF777Q9ULD5 760 aaPredicted RBP23.6■■□□□ 1.37
VAC14-210ENST00000568548 SLC4A1APQ9BWU0 796 aaKnown RBP23.59■■□□□ 1.37
VAC14-210ENST00000568548 TROQ12816 1431 aaPredicted RBP23.59■■□□□ 1.37
VAC14-210ENST00000568548 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.36
VAC14-210ENST00000568548 KDM6BO15054 1643 aa23.57■■□□□ 1.36
VAC14-210ENST00000568548 DENND4BO75064 1496 aaPredicted RBP23.55■■□□□ 1.36
VAC14-210ENST00000568548 KDM5BQ9UGL1 1544 aa23.55■■□□□ 1.36
VAC14-210ENST00000568548 ABCA8O94911 1581 aa23.54■■□□□ 1.36
VAC14-210ENST00000568548 PTPRGP23470 1445 aa23.52■■□□□ 1.36
VAC14-210ENST00000568548 KIF14Q15058 1648 aa23.5■■□□□ 1.35
VAC14-210ENST00000568548 PLEKHD1A6NEE1 506 aa23.5■■□□□ 1.35
VAC14-210ENST00000568548 ATP10BO94823 1461 aa23.49■■□□□ 1.35
VAC14-210ENST00000568548 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
VAC14-210ENST00000568548 KIF7Q2M1P5 1343 aa23.48■■□□□ 1.35
VAC14-210ENST00000568548 DAPK1P53355 1430 aa23.48■■□□□ 1.35
VAC14-210ENST00000568548 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
VAC14-210ENST00000568548 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
VAC14-210ENST00000568548 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
VAC14-210ENST00000568548 AKNAQ7Z591 1439 aa23.46■■□□□ 1.35
VAC14-210ENST00000568548 ABCC5O15440 1437 aa23.46■■□□□ 1.35
VAC14-210ENST00000568548 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
VAC14-210ENST00000568548 ADCY10Q96PN6 1610 aa23.45■■□□□ 1.34
VAC14-210ENST00000568548 DNMT1P26358 1616 aaKnown RBP23.44■■□□□ 1.34
VAC14-210ENST00000568548 PPP4R2Q9NY27 417 aa23.43■■□□□ 1.34
VAC14-210ENST00000568548 KDM2AQ9Y2K7 1162 aa23.43■■□□□ 1.34
VAC14-210ENST00000568548 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
VAC14-210ENST00000568548 ITSN2Q9NZM3 1697 aa23.42■■□□□ 1.34
VAC14-210ENST00000568548 CAMSAP2Q08AD1 1489 aa23.41■■□□□ 1.34
VAC14-210ENST00000568548 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
VAC14-210ENST00000568548 ROCK1Q13464 1354 aa23.39■■□□□ 1.33
VAC14-210ENST00000568548 ERCC6L2Q5T890 1561 aa23.37■■□□□ 1.33
VAC14-210ENST00000568548 NBR1Q14596 966 aa23.36■■□□□ 1.33
VAC14-210ENST00000568548 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
VAC14-210ENST00000568548 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
VAC14-210ENST00000568548 PKD2Q13563 968 aa23.33■■□□□ 1.33
VAC14-210ENST00000568548 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.32
VAC14-210ENST00000568548 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
VAC14-210ENST00000568548 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
VAC14-210ENST00000568548 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
VAC14-210ENST00000568548 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
VAC14-210ENST00000568548 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
VAC14-210ENST00000568548 PAK3O75914 559 aaPredicted RBP23.24■■□□□ 1.31
VAC14-210ENST00000568548 CCDC136Q96JN2 1154 aa23.24■■□□□ 1.31
VAC14-210ENST00000568548 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
VAC14-210ENST00000568548 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
VAC14-210ENST00000568548 ABCC2Q92887 1545 aa23.22■■□□□ 1.31
VAC14-210ENST00000568548 ANKRD30AQ9BXX3 1397 aa23.2■■□□□ 1.31
VAC14-210ENST00000568548 RPRD2Q5VT52 1461 aaKnown RBP23.2■■□□□ 1.3
VAC14-210ENST00000568548 HNRNPMP52272 730 aaKnown RBP eCLIP23.2■■□□□ 1.3
VAC14-210ENST00000568548 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
VAC14-210ENST00000568548 CARD11Q9BXL7 1154 aa23.2■■□□□ 1.3
VAC14-210ENST00000568548 USP47Q96K76 1375 aa23.2■■□□□ 1.3
VAC14-210ENST00000568548 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
VAC14-210ENST00000568548 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
VAC14-210ENST00000568548 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
VAC14-210ENST00000568548 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
VAC14-210ENST00000568548 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
VAC14-210ENST00000568548 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
VAC14-210ENST00000568548 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
VAC14-210ENST00000568548 SPATA31E1Q6ZUB1 1445 aa23.16■■□□□ 1.3
VAC14-210ENST00000568548 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
VAC14-210ENST00000568548 NPM2Q86SE8 214 aaKnown RBP23.15■■□□□ 1.3
VAC14-210ENST00000568548 PREX2Q70Z35 1606 aa23.13■■□□□ 1.29
VAC14-210ENST00000568548 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
VAC14-210ENST00000568548 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
VAC14-210ENST00000568548 TTC37Q6PGP7 1564 aa23.12■■□□□ 1.29
VAC14-210ENST00000568548 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
VAC14-210ENST00000568548 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
VAC14-210ENST00000568548 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
VAC14-210ENST00000568548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.11■■□□□ 1.29
VAC14-210ENST00000568548 DEKP35659 375 aaKnown RBP23.11■■□□□ 1.29
VAC14-210ENST00000568548 MBD5Q9P267 1494 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms