RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CD109Q6YHK3 1445 aa22.89■■□□□ 1.25
SPG7-213ENST00000566221 GPATCH8Q9UKJ3 1502 aaKnown RBP22.88■■□□□ 1.25
SPG7-213ENST00000566221 MYOM3Q5VTT5 1437 aa22.88■■□□□ 1.25
SPG7-213ENST00000566221 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
SPG7-213ENST00000566221 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
SPG7-213ENST00000566221 PLCH2O75038 1416 aa22.86■■□□□ 1.25
SPG7-213ENST00000566221 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
SPG7-213ENST00000566221 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
SPG7-213ENST00000566221 FGD6Q6ZV73 1430 aa22.81■■□□□ 1.24
SPG7-213ENST00000566221 FANCAO15360 1455 aa22.8■■□□□ 1.24
SPG7-213ENST00000566221 PTPN23Q9H3S7 1636 aa22.8■■□□□ 1.24
SPG7-213ENST00000566221 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
SPG7-213ENST00000566221 NEO1Q92859 1461 aa22.78■■□□□ 1.24
SPG7-213ENST00000566221 CFDP1Q9UEE9 299 aaPredicted RBP22.76■■□□□ 1.23
SPG7-213ENST00000566221 CAMSAP2Q08AD1 1489 aa22.75■■□□□ 1.23
SPG7-213ENST00000566221 ABCC1P33527 1531 aa22.75■■□□□ 1.23
SPG7-213ENST00000566221 TCOF1Q13428 1488 aaKnown RBP22.74■■□□□ 1.23
SPG7-213ENST00000566221 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
SPG7-213ENST00000566221 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
SPG7-213ENST00000566221 RRBP1Q9P2E9 1410 aaKnown RBP22.73■■□□□ 1.23
SPG7-213ENST00000566221 KDM6BO15054 1643 aa22.71■■□□□ 1.23
SPG7-213ENST00000566221 AKNAQ7Z591 1439 aa22.7■■□□□ 1.22
SPG7-213ENST00000566221 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
SPG7-213ENST00000566221 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
SPG7-213ENST00000566221 CROCC2H7BZ55 1655 aa22.68■■□□□ 1.22
SPG7-213ENST00000566221 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
SPG7-213ENST00000566221 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
SPG7-213ENST00000566221 KIAA1107Q9UPP5 1409 aa22.66■■□□□ 1.22
SPG7-213ENST00000566221 DNMT1P26358 1616 aaKnown RBP22.66■■□□□ 1.22
SPG7-213ENST00000566221 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
SPG7-213ENST00000566221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
SPG7-213ENST00000566221 ZNF644Q9H582 1327 aaPredicted RBP22.63■■□□□ 1.21
SPG7-213ENST00000566221 ARHGEF12Q9NZN5 1544 aa22.62■■□□□ 1.21
SPG7-213ENST00000566221 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
SPG7-213ENST00000566221 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
SPG7-213ENST00000566221 FAM50AQ14320 339 aaKnown RBP22.6■■□□□ 1.21
SPG7-213ENST00000566221 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
SPG7-213ENST00000566221 CCDC141Q6ZP82 1450 aa22.6■■□□□ 1.21
SPG7-213ENST00000566221 FRMPD1Q5SYB0 1578 aa22.59■■□□□ 1.21
SPG7-213ENST00000566221 POGZQ7Z3K3 1410 aa22.59■■□□□ 1.21
SPG7-213ENST00000566221 ZNF518AQ6AHZ1 1483 aa22.59■■□□□ 1.21
SPG7-213ENST00000566221 KDM5CP41229 1560 aa22.58■■□□□ 1.2
SPG7-213ENST00000566221 ADGBQ8N7X0 1667 aa22.57■■□□□ 1.2
SPG7-213ENST00000566221 DAPK1P53355 1430 aa22.56■■□□□ 1.2
SPG7-213ENST00000566221 SHANK2Q9UPX8 1470 aa22.55■■□□□ 1.2
SPG7-213ENST00000566221 ZMYM4Q5VZL5 1548 aa22.55■■□□□ 1.2
SPG7-213ENST00000566221 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
SPG7-213ENST00000566221 MAST1Q9Y2H9 1570 aa22.55■■□□□ 1.2
SPG7-213ENST00000566221 HNRNPMP52272 730 aaKnown RBP eCLIP22.54■■□□□ 1.2
SPG7-213ENST00000566221 HECW2Q9P2P5 1572 aa22.54■■□□□ 1.2
SPG7-213ENST00000566221 INO80Q9ULG1 1556 aaPredicted RBP22.54■■□□□ 1.2
SPG7-213ENST00000566221 RSPH4AQ5TD94 716 aa22.53■■□□□ 1.2
SPG7-213ENST00000566221 ABCC5O15440 1437 aa22.52■■□□□ 1.2
SPG7-213ENST00000566221 COL17A1Q9UMD9 1497 aaPredicted RBP22.51■■□□□ 1.19
SPG7-213ENST00000566221 ZFYVE16Q7Z3T8 1539 aa22.5■■□□□ 1.19
SPG7-213ENST00000566221 KIDINS220Q9ULH0 1771 aa22.49■■□□□ 1.19
SPG7-213ENST00000566221 ATP7AQ04656 1500 aa22.49■■□□□ 1.19
SPG7-213ENST00000566221 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
SPG7-213ENST00000566221 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
SPG7-213ENST00000566221 MLH3Q9UHC1 1453 aa22.46■■□□□ 1.19
SPG7-213ENST00000566221 RAPGEF3O95398 923 aa22.45■■□□□ 1.18
SPG7-213ENST00000566221 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
SPG7-213ENST00000566221 RTEL1-TNFRSF6BF6WH68 1400 aa22.44■■□□□ 1.18
SPG7-213ENST00000566221 ADGRL2O95490 1459 aa22.44■■□□□ 1.18
SPG7-213ENST00000566221 MAGI2Q86UL8 1455 aa22.44■■□□□ 1.18
SPG7-213ENST00000566221 AFAP1Q8N556 730 aa22.44■■□□□ 1.18
SPG7-213ENST00000566221 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
SPG7-213ENST00000566221 ARHGEF40Q8TER5 1519 aa22.43■■□□□ 1.18
SPG7-213ENST00000566221 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
SPG7-213ENST00000566221 SPAG9O60271 1321 aaKnown RBP22.43■■□□□ 1.18
SPG7-213ENST00000566221 TSPY4P0CV99 314 aa22.43■■□□□ 1.18
SPG7-213ENST00000566221 TSPY10P0CW01 314 aa22.43■■□□□ 1.18
SPG7-213ENST00000566221 GCC2Q8IWJ2 1684 aa22.42■■□□□ 1.18
SPG7-213ENST00000566221 ITGAEP38570 1179 aa22.41■■□□□ 1.18
SPG7-213ENST00000566221 DIP2CQ9Y2E4 1556 aa22.4■■□□□ 1.18
SPG7-213ENST00000566221 ROCK1Q13464 1354 aa22.38■■□□□ 1.17
SPG7-213ENST00000566221 ANKRD30AQ9BXX3 1397 aa22.38■■□□□ 1.17
SPG7-213ENST00000566221 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
SPG7-213ENST00000566221 NCOA1Q15788 1441 aa22.34■■□□□ 1.17
SPG7-213ENST00000566221 YEATS2Q9ULM3 1422 aa22.34■■□□□ 1.17
SPG7-213ENST00000566221 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
SPG7-213ENST00000566221 REREQ9P2R6 1566 aa22.33■■□□□ 1.17
SPG7-213ENST00000566221 DUOX2Q9NRD8 1548 aa22.33■■□□□ 1.17
SPG7-213ENST00000566221 FBXO41Q8TF61 875 aa22.32■■□□□ 1.16
SPG7-213ENST00000566221 KIF15Q9NS87 1388 aa22.32■■□□□ 1.16
SPG7-213ENST00000566221 EIF2AK4Q9P2K8 1649 aaKnown RBP22.31■■□□□ 1.16
SPG7-213ENST00000566221 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
SPG7-213ENST00000566221 ATP10AO60312 1499 aa22.29■■□□□ 1.16
SPG7-213ENST00000566221 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
SPG7-213ENST00000566221 A2MP01023 1474 aa22.28■■□□□ 1.16
SPG7-213ENST00000566221 NAIPQ13075 1403 aa22.26■■□□□ 1.15
SPG7-213ENST00000566221 ERBINQ96RT1 1412 aa22.26■■□□□ 1.15
SPG7-213ENST00000566221 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
SPG7-213ENST00000566221 SIGLEC1Q9BZZ2 1709 aa22.25■■□□□ 1.15
SPG7-213ENST00000566221 DHX29Q7Z478 1369 aaKnown RBP22.23■■□□□ 1.15
SPG7-213ENST00000566221 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
SPG7-213ENST00000566221 AGLP35573 1532 aa22.21■■□□□ 1.15
SPG7-213ENST00000566221 DEPDC5O75140 1603 aa22.2■■□□□ 1.15
SPG7-213ENST00000566221 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.15
SPG7-213ENST00000566221 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms