RNA–Protein interactions for RNA: ENST00000565964.5

COQ9-208, Transcript of coenzyme Q9, human

TSL 3

Gene COQ9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COQ9-208	ENST00000565964	CDC42BPA	Q5VT25	1732 aa		32.62	■■■□□ 2.81
COQ9-208	ENST00000565964	MYOM3	Q5VTT5	1437 aa		32.61	■■■□□ 2.81
COQ9-208	ENST00000565964	MYO5C	Q9NQX4	1742 aa		32.61	■■■□□ 2.81
COQ9-208	ENST00000565964	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.6	■■■□□ 2.81
COQ9-208	ENST00000565964	FANCA	O15360	1455 aa		32.6	■■■□□ 2.81
COQ9-208	ENST00000565964	CDC42BPB	Q9Y5S2	1711 aa		32.6	■■■□□ 2.81
COQ9-208	ENST00000565964	MIA2	Q96PC5	1412 aa		32.6	■■■□□ 2.81
COQ9-208	ENST00000565964	KDM4F	A0A1W2PPD8	638 aa		32.59	■■■□□ 2.81
COQ9-208	ENST00000565964	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.59	■■■□□ 2.81
COQ9-208	ENST00000565964	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.58	■■■□□ 2.81
COQ9-208	ENST00000565964	AKNA	Q7Z591	1439 aa		32.55	■■■□□ 2.8
COQ9-208	ENST00000565964	ARHGAP5	Q13017	1502 aa		32.55	■■■□□ 2.8
COQ9-208	ENST00000565964	ITSN2	Q9NZM3	1697 aa		32.53	■■■□□ 2.8
COQ9-208	ENST00000565964	KIAA1107	Q9UPP5	1409 aa		32.5	■■■□□ 2.79
COQ9-208	ENST00000565964	FGD6	Q6ZV73	1430 aa		32.49	■■■□□ 2.79
COQ9-208	ENST00000565964	CFAP74	Q9C0B2	1584 aa		32.49	■■■□□ 2.79
COQ9-208	ENST00000565964	ZNF644	Q9H582	1327 aa	Predicted RBP	32.46	■■■□□ 2.79
COQ9-208	ENST00000565964	SAMD9L	Q8IVG5	1584 aa		32.45	■■■□□ 2.78
COQ9-208	ENST00000565964	PLEKHH2	Q8IVE3	1493 aa		32.44	■■■□□ 2.78
COQ9-208	ENST00000565964	TCOF1	Q13428	1488 aa	Known RBP	32.43	■■■□□ 2.78
COQ9-208	ENST00000565964	ADGRL1	O94910	1474 aa		32.42	■■■□□ 2.78
COQ9-208	ENST00000565964	ARHGEF12	Q9NZN5	1544 aa		32.42	■■■□□ 2.78
COQ9-208	ENST00000565964	ABCC1	P33527	1531 aa		32.41	■■■□□ 2.78
COQ9-208	ENST00000565964	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.41	■■■□□ 2.78
COQ9-208	ENST00000565964	SCAPER	Q9BY12	1400 aa		32.41	■■■□□ 2.78
COQ9-208	ENST00000565964	MBD5	Q9P267	1494 aa		32.4	■■■□□ 2.78
COQ9-208	ENST00000565964	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.39	■■■□□ 2.78
COQ9-208	ENST00000565964	RRBP1	Q9P2E9	1410 aa	Known RBP	32.39	■■■□□ 2.78
COQ9-208	ENST00000565964	CAMSAP2	Q08AD1	1489 aa		32.37	■■■□□ 2.77
COQ9-208	ENST00000565964	DENND4B	O75064	1496 aa	Predicted RBP	32.36	■■■□□ 2.77
COQ9-208	ENST00000565964	RSPH4A	Q5TD94	716 aa		32.35	■■■□□ 2.77
COQ9-208	ENST00000565964	PTPN23	Q9H3S7	1636 aa		32.34	■■■□□ 2.77
COQ9-208	ENST00000565964	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.33	■■■□□ 2.77
COQ9-208	ENST00000565964	POGZ	Q7Z3K3	1410 aa		32.33	■■■□□ 2.77
COQ9-208	ENST00000565964	TRAPPC8	Q9Y2L5	1435 aa		32.32	■■■□□ 2.76
COQ9-208	ENST00000565964	RAPGEF3	O95398	923 aa		32.3	■■■□□ 2.76
COQ9-208	ENST00000565964	SYCP2	Q9BX26	1530 aa		32.3	■■■□□ 2.76
COQ9-208	ENST00000565964	AFAP1	Q8N556	730 aa		32.28	■■■□□ 2.76
COQ9-208	ENST00000565964	ARHGEF5	Q12774	1597 aa		32.28	■■■□□ 2.76
COQ9-208	ENST00000565964	ZNF518A	Q6AHZ1	1483 aa		32.27	■■■□□ 2.76
COQ9-208	ENST00000565964	FRMPD1	Q5SYB0	1578 aa		32.27	■■■□□ 2.76
COQ9-208	ENST00000565964	KDM5C	P41229	1560 aa		32.24	■■■□□ 2.75
COQ9-208	ENST00000565964	RICTOR	Q6R327	1708 aa		32.23	■■■□□ 2.75
COQ9-208	ENST00000565964	CCDC141	Q6ZP82	1450 aa		32.22	■■■□□ 2.75
COQ9-208	ENST00000565964	ABCC5	O15440	1437 aa		32.21	■■■□□ 2.75
COQ9-208	ENST00000565964	ZMYM4	Q5VZL5	1548 aa		32.21	■■■□□ 2.75
COQ9-208	ENST00000565964	MLH3	Q9UHC1	1453 aa		32.2	■■■□□ 2.75
COQ9-208	ENST00000565964	FAM50A	Q14320	339 aa	Known RBP	32.19	■■■□□ 2.74
COQ9-208	ENST00000565964	MAGI2	Q86UL8	1455 aa		32.18	■■■□□ 2.74
COQ9-208	ENST00000565964	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.16	■■■□□ 2.74
COQ9-208	ENST00000565964	DAPK1	P53355	1430 aa		32.16	■■■□□ 2.74
COQ9-208	ENST00000565964	DNMT1	P26358	1616 aa	Known RBP	32.15	■■■□□ 2.74
COQ9-208	ENST00000565964	SHANK2	Q9UPX8	1470 aa		32.12	■■■□□ 2.73
COQ9-208	ENST00000565964	SPAG9	O60271	1321 aa	Known RBP	32.12	■■■□□ 2.73
COQ9-208	ENST00000565964	TSPY4	P0CV99	314 aa		32.12	■■■□□ 2.73
COQ9-208	ENST00000565964	TSPY10	P0CW01	314 aa		32.12	■■■□□ 2.73
COQ9-208	ENST00000565964	PTPRK	Q15262	1439 aa		32.1	■■■□□ 2.73
COQ9-208	ENST00000565964	MAST1	Q9Y2H9	1570 aa		32.1	■■■□□ 2.73
COQ9-208	ENST00000565964	INO80	Q9ULG1	1556 aa	Predicted RBP	32.06	■■■□□ 2.72
COQ9-208	ENST00000565964	ZFYVE16	Q7Z3T8	1539 aa		32.05	■■■□□ 2.72
COQ9-208	ENST00000565964	C9orf84	Q5VXU9	1444 aa		32.05	■■■□□ 2.72
COQ9-208	ENST00000565964	HECW2	Q9P2P5	1572 aa		32.05	■■■□□ 2.72
COQ9-208	ENST00000565964	YEATS2	Q9ULM3	1422 aa		32.03	■■■□□ 2.72
COQ9-208	ENST00000565964	KIDINS220	Q9ULH0	1771 aa		32.03	■■■□□ 2.72
COQ9-208	ENST00000565964	ATP7A	Q04656	1500 aa		32.02	■■■□□ 2.72
COQ9-208	ENST00000565964	ADGRL2	O95490	1459 aa		32.01	■■■□□ 2.71
COQ9-208	ENST00000565964	CROCC2	H7BZ55	1655 aa		32.01	■■■□□ 2.71
COQ9-208	ENST00000565964	ROCK1	Q13464	1354 aa		31.99	■■■□□ 2.71
COQ9-208	ENST00000565964	NCOA1	Q15788	1441 aa		31.99	■■■□□ 2.71
COQ9-208	ENST00000565964	ATP10A	O60312	1499 aa		31.97	■■■□□ 2.71
COQ9-208	ENST00000565964	ARHGEF40	Q8TER5	1519 aa		31.96	■■■□□ 2.71
COQ9-208	ENST00000565964	DIP2C	Q9Y2E4	1556 aa		31.94	■■■□□ 2.7
COQ9-208	ENST00000565964	CHIC2	Q9UKJ5	165 aa		31.93	■■■□□ 2.7
COQ9-208	ENST00000565964	PLXNC1	O60486	1568 aa		31.93	■■■□□ 2.7
COQ9-208	ENST00000565964	ANKRD30A	Q9BXX3	1397 aa		31.93	■■■□□ 2.7
COQ9-208	ENST00000565964	RERE	Q9P2R6	1566 aa		31.92	■■■□□ 2.7
COQ9-208	ENST00000565964	ABCA6	Q8N139	1617 aa		31.92	■■■□□ 2.7
COQ9-208	ENST00000565964	DHX29	Q7Z478	1369 aa	Known RBP	31.9	■■■□□ 2.7
COQ9-208	ENST00000565964	ITGAE	P38570	1179 aa		31.89	■■■□□ 2.7
COQ9-208	ENST00000565964	MYT1L	Q9UL68	1186 aa		31.88	■■■□□ 2.69
COQ9-208	ENST00000565964	TRIM26	Q12899	539 aa	Predicted RBP	31.87	■■■□□ 2.69
COQ9-208	ENST00000565964	A2M	P01023	1474 aa		31.85	■■■□□ 2.69
COQ9-208	ENST00000565964	KIF15	Q9NS87	1388 aa		31.85	■■■□□ 2.69
COQ9-208	ENST00000565964	RRP7BP	Q9NSQ0	103 aa		31.84	■■■□□ 2.69
COQ9-208	ENST00000565964	AGL	P35573	1532 aa		31.83	■■■□□ 2.69
COQ9-208	ENST00000565964	DUOX2	Q9NRD8	1548 aa		31.82	■■■□□ 2.68
COQ9-208	ENST00000565964	ADGB	Q8N7X0	1667 aa		31.81	■■■□□ 2.68
COQ9-208	ENST00000565964	HFM1	A2PYH4	1435 aa		31.78	■■■□□ 2.68
COQ9-208	ENST00000565964	NAIP	Q13075	1403 aa		31.77	■■■□□ 2.68
COQ9-208	ENST00000565964	ERBIN	Q96RT1	1412 aa		31.76	■■■□□ 2.68
COQ9-208	ENST00000565964	SIGLEC1	Q9BZZ2	1709 aa		31.75	■■■□□ 2.67
COQ9-208	ENST00000565964	ANKRD50	Q9ULJ7	1429 aa		31.74	■■■□□ 2.67
COQ9-208	ENST00000565964	ADAMTSL3	P82987	1691 aa		31.73	■■■□□ 2.67
COQ9-208	ENST00000565964	BCORL1	Q5H9F3	1711 aa		31.7	■■■□□ 2.67
COQ9-208	ENST00000565964	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.67	■■■□□ 2.66
COQ9-208	ENST00000565964	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.67	■■■□□ 2.66
COQ9-208	ENST00000565964	PTPRM	P28827	1452 aa		31.65	■■■□□ 2.66
COQ9-208	ENST00000565964	KIF3B	O15066	747 aa		31.64	■■■□□ 2.66
COQ9-208	ENST00000565964	PPP6R1	Q9UPN7	881 aa		31.64	■■■□□ 2.66
COQ9-208	ENST00000565964	MADD	Q8WXG6	1647 aa		31.62	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 8 ms