RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 GLI2P10070 1586 aa17.12■□□□□ 0.33
FANCA-217ENST00000564969 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
FANCA-217ENST00000564969 ZNF644Q9H582 1327 aaPredicted RBP17.12■□□□□ 0.33
FANCA-217ENST00000564969 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
FANCA-217ENST00000564969 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
FANCA-217ENST00000564969 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
FANCA-217ENST00000564969 ARHGAP5Q13017 1502 aa17.08■□□□□ 0.32
FANCA-217ENST00000564969 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
FANCA-217ENST00000564969 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
FANCA-217ENST00000564969 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
FANCA-217ENST00000564969 PTPN23Q9H3S7 1636 aa17.07■□□□□ 0.32
FANCA-217ENST00000564969 ITGAEP38570 1179 aa17.06■□□□□ 0.32
FANCA-217ENST00000564969 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
FANCA-217ENST00000564969 PREX2Q70Z35 1606 aa17.05■□□□□ 0.32
FANCA-217ENST00000564969 DIP2BQ9P265 1576 aa17.05■□□□□ 0.32
FANCA-217ENST00000564969 FANCAO15360 1455 aa17.05■□□□□ 0.32
FANCA-217ENST00000564969 CAMSAP2Q08AD1 1489 aa17.05■□□□□ 0.32
FANCA-217ENST00000564969 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
FANCA-217ENST00000564969 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
FANCA-217ENST00000564969 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
FANCA-217ENST00000564969 MYO5CQ9NQX4 1742 aa17.02■□□□□ 0.32
FANCA-217ENST00000564969 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
FANCA-217ENST00000564969 AKNAQ7Z591 1439 aa17.02■□□□□ 0.31
FANCA-217ENST00000564969 NEO1Q92859 1461 aa17.01■□□□□ 0.31
FANCA-217ENST00000564969 ABCC5O15440 1437 aa17.01■□□□□ 0.31
FANCA-217ENST00000564969 MBD5Q9P267 1494 aa17■□□□□ 0.31
FANCA-217ENST00000564969 CDC42BPBQ9Y5S2 1711 aa17■□□□□ 0.31
FANCA-217ENST00000564969 DAPK1P53355 1430 aa16.99■□□□□ 0.31
FANCA-217ENST00000564969 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
FANCA-217ENST00000564969 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
FANCA-217ENST00000564969 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
FANCA-217ENST00000564969 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
FANCA-217ENST00000564969 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
FANCA-217ENST00000564969 ADGRL1O94910 1474 aa16.97■□□□□ 0.31
FANCA-217ENST00000564969 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
FANCA-217ENST00000564969 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.3
FANCA-217ENST00000564969 ARHGEF5Q12774 1597 aa16.95■□□□□ 0.3
FANCA-217ENST00000564969 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
FANCA-217ENST00000564969 AFAP1Q8N556 730 aa16.95■□□□□ 0.3
FANCA-217ENST00000564969 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
FANCA-217ENST00000564969 ABCC1P33527 1531 aa16.94■□□□□ 0.3
FANCA-217ENST00000564969 CFAP74Q9C0B2 1584 aa16.94■□□□□ 0.3
FANCA-217ENST00000564969 TRAPPC8Q9Y2L5 1435 aa16.93■□□□□ 0.3
FANCA-217ENST00000564969 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
FANCA-217ENST00000564969 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
FANCA-217ENST00000564969 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
FANCA-217ENST00000564969 SHANK2Q9UPX8 1470 aa16.92■□□□□ 0.3
FANCA-217ENST00000564969 ANKRD30AQ9BXX3 1397 aa16.91■□□□□ 0.3
FANCA-217ENST00000564969 HRCP23327 699 aa16.91■□□□□ 0.3
FANCA-217ENST00000564969 DENND4BO75064 1496 aaPredicted RBP16.91■□□□□ 0.3
FANCA-217ENST00000564969 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
FANCA-217ENST00000564969 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
FANCA-217ENST00000564969 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
FANCA-217ENST00000564969 NCOA1Q15788 1441 aa16.89■□□□□ 0.29
FANCA-217ENST00000564969 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
FANCA-217ENST00000564969 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
FANCA-217ENST00000564969 RAPGEF3O95398 923 aa16.88■□□□□ 0.29
FANCA-217ENST00000564969 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
FANCA-217ENST00000564969 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
FANCA-217ENST00000564969 HFM1A2PYH4 1435 aa16.87■□□□□ 0.29
FANCA-217ENST00000564969 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
FANCA-217ENST00000564969 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
FANCA-217ENST00000564969 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
FANCA-217ENST00000564969 NAIPQ13075 1403 aa16.85■□□□□ 0.29
FANCA-217ENST00000564969 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
FANCA-217ENST00000564969 MLH3Q9UHC1 1453 aa16.83■□□□□ 0.28
FANCA-217ENST00000564969 MAST1Q9Y2H9 1570 aa16.83■□□□□ 0.28
FANCA-217ENST00000564969 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
FANCA-217ENST00000564969 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
FANCA-217ENST00000564969 KDM5CP41229 1560 aa16.79■□□□□ 0.28
FANCA-217ENST00000564969 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
FANCA-217ENST00000564969 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
FANCA-217ENST00000564969 TSPOAP1O95153 1857 aa16.78■□□□□ 0.28
FANCA-217ENST00000564969 MAGI2Q86UL8 1455 aa16.78■□□□□ 0.28
FANCA-217ENST00000564969 CROCC2H7BZ55 1655 aa16.77■□□□□ 0.28
FANCA-217ENST00000564969 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.27
FANCA-217ENST00000564969 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
FANCA-217ENST00000564969 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
FANCA-217ENST00000564969 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
FANCA-217ENST00000564969 DUOX2Q9NRD8 1548 aa16.74■□□□□ 0.27
FANCA-217ENST00000564969 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
FANCA-217ENST00000564969 ZMYM4Q5VZL5 1548 aa16.73■□□□□ 0.27
FANCA-217ENST00000564969 INO80Q9ULG1 1556 aaPredicted RBP16.72■□□□□ 0.27
FANCA-217ENST00000564969 ERBINQ96RT1 1412 aa16.72■□□□□ 0.27
FANCA-217ENST00000564969 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
FANCA-217ENST00000564969 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
FANCA-217ENST00000564969 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
FANCA-217ENST00000564969 FRMPD1Q5SYB0 1578 aa16.7■□□□□ 0.26
FANCA-217ENST00000564969 A2MP01023 1474 aa16.7■□□□□ 0.26
FANCA-217ENST00000564969 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
FANCA-217ENST00000564969 ATP10AO60312 1499 aa16.69■□□□□ 0.26
FANCA-217ENST00000564969 KIF3BO15066 747 aa16.68■□□□□ 0.26
FANCA-217ENST00000564969 FOXD1Q16676 465 aa16.68■□□□□ 0.26
FANCA-217ENST00000564969 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
FANCA-217ENST00000564969 GCC2Q8IWJ2 1684 aa16.68■□□□□ 0.26
FANCA-217ENST00000564969 CCER1Q8TC90 406 aaPredicted RBP16.67■□□□□ 0.26
FANCA-217ENST00000564969 NUP155O75694 1391 aa16.65■□□□□ 0.26
FANCA-217ENST00000564969 KDM6BO15054 1643 aa16.65■□□□□ 0.26
FANCA-217ENST00000564969 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
FANCA-217ENST00000564969 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms