RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 C11orf95C9JLR9 678 aaPredicted RBP4.7□□□□□ -1.66
CHD9-213ENST00000564845 BCL11AQ9H165 835 aa4.7□□□□□ -1.66
CHD9-213ENST00000564845 CEP170Q5SW79 1584 aa4.7□□□□□ -1.66
CHD9-213ENST00000564845 FGD6Q6ZV73 1430 aa4.7□□□□□ -1.66
CHD9-213ENST00000564845 ABCC10Q5T3U5 1492 aa4.7□□□□□ -1.66
CHD9-213ENST00000564845 CENPFP49454 3210 aa4.7□□□□□ -1.66
CHD9-213ENST00000564845 EIF4G3O43432 1585 aaKnown RBP4.7□□□□□ -1.66
CHD9-213ENST00000564845 ABCA8O94911 1581 aa4.7□□□□□ -1.66
CHD9-213ENST00000564845 PTPRGP23470 1445 aa4.69□□□□□ -1.66
CHD9-213ENST00000564845 PLA2R1Q13018 1463 aa4.69□□□□□ -1.66
CHD9-213ENST00000564845 EPRSP07814 1512 aaKnown RBP4.68□□□□□ -1.66
CHD9-213ENST00000564845 SHROOM2Q13796 1616 aa4.68□□□□□ -1.66
CHD9-213ENST00000564845 KIAA0586Q9BVV6 1533 aa4.68□□□□□ -1.66
CHD9-213ENST00000564845 BRCA2P51587 3418 aa4.68□□□□□ -1.66
CHD9-213ENST00000564845 SKAP1Q86WV1 359 aa4.68□□□□□ -1.66
CHD9-213ENST00000564845 PLB1Q6P1J6 1458 aa4.68□□□□□ -1.66
CHD9-213ENST00000564845 NCOA2Q15596 1464 aa4.67□□□□□ -1.66
CHD9-213ENST00000564845 PRG4Q92954 1404 aaPredicted RBP4.67□□□□□ -1.66
CHD9-213ENST00000564845 PTPN23Q9H3S7 1636 aa4.67□□□□□ -1.66
CHD9-213ENST00000564845 SAFB2Q14151 953 aaKnown RBP eCLIP4.67□□□□□ -1.66
CHD9-213ENST00000564845 KIAA0556O60303 1618 aa4.67□□□□□ -1.66
CHD9-213ENST00000564845 FHAD1B1AJZ9 1412 aa4.67□□□□□ -1.66
CHD9-213ENST00000564845 SLC4A1APQ9BWU0 796 aaKnown RBP4.67□□□□□ -1.66
CHD9-213ENST00000564845 ERCC6L2Q5T890 1561 aa4.67□□□□□ -1.66
CHD9-213ENST00000564845 GRIN2AQ12879 1464 aa4.66□□□□□ -1.66
CHD9-213ENST00000564845 PZPP20742 1482 aa4.66□□□□□ -1.66
CHD9-213ENST00000564845 CHGAP10645 457 aaKnown RBP4.66□□□□□ -1.66
CHD9-213ENST00000564845 MYOM3Q5VTT5 1437 aa4.65□□□□□ -1.66
CHD9-213ENST00000564845 FKBP8Q14318 412 aa4.65□□□□□ -1.66
CHD9-213ENST00000564845 MLECQ14165 292 aa4.65□□□□□ -1.66
CHD9-213ENST00000564845 ARID4BQ4LE39 1312 aaPredicted RBP4.65□□□□□ -1.66
CHD9-213ENST00000564845 JPH4Q96JJ6 628 aa4.65□□□□□ -1.66
CHD9-213ENST00000564845 IQGAP2Q13576 1575 aa4.65□□□□□ -1.67
CHD9-213ENST00000564845 PPP1R15AO75807 674 aaPredicted RBP4.65□□□□□ -1.67
CHD9-213ENST00000564845 TNNT2P45379 298 aaPredicted RBP4.65□□□□□ -1.67
CHD9-213ENST00000564845 ARHGEF12Q9NZN5 1544 aa4.65□□□□□ -1.67
CHD9-213ENST00000564845 PBRM1Q86U86 1689 aa4.65□□□□□ -1.67
CHD9-213ENST00000564845 MAGI2Q86UL8 1455 aa4.65□□□□□ -1.67
CHD9-213ENST00000564845 ADCY10Q96PN6 1610 aa4.64□□□□□ -1.67
CHD9-213ENST00000564845 NBPF8Q3BBV2 869 aa4.64□□□□□ -1.67
CHD9-213ENST00000564845 L3MBTL2Q969R5 705 aa4.64□□□□□ -1.67
CHD9-213ENST00000564845 MRC2Q9UBG0 1479 aa4.64□□□□□ -1.67
CHD9-213ENST00000564845 CFDP1Q9UEE9 299 aaPredicted RBP4.64□□□□□ -1.67
CHD9-213ENST00000564845 ADGRL2O95490 1459 aa4.64□□□□□ -1.67
CHD9-213ENST00000564845 NCOA1Q15788 1441 aa4.63□□□□□ -1.67
CHD9-213ENST00000564845 CYB5RLQ6IPT4 315 aa4.63□□□□□ -1.67
CHD9-213ENST00000564845 UACAQ9BZF9 1416 aa4.63□□□□□ -1.67
CHD9-213ENST00000564845 GPATCH8Q9UKJ3 1502 aaKnown RBP4.63□□□□□ -1.67
CHD9-213ENST00000564845 AFAP1Q8N556 730 aa4.63□□□□□ -1.67
CHD9-213ENST00000564845 ABCC5O15440 1437 aa4.63□□□□□ -1.67
CHD9-213ENST00000564845 HSPA5P11021 654 aaKnown RBP4.63□□□□□ -1.67
CHD9-213ENST00000564845 KIF14Q15058 1648 aa4.63□□□□□ -1.67
CHD9-213ENST00000564845 CC2D1BQ5T0F9 858 aaKnown RBP4.63□□□□□ -1.67
CHD9-213ENST00000564845 AEBP2Q6ZN18 517 aaPredicted RBP4.63□□□□□ -1.67
CHD9-213ENST00000564845 DCAF11Q8TEB1 546 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 RBM33Q96EV2 1170 aaKnown RBP4.62□□□□□ -1.67
CHD9-213ENST00000564845 MIA2Q96PC5 1412 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 GCC2Q8IWJ2 1684 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 HNRNPUQ00839 825 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD9-213ENST00000564845 FMN1Q68DA7 1419 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 RPRD2Q5VT52 1461 aaKnown RBP4.62□□□□□ -1.67
CHD9-213ENST00000564845 MPHOSPH9Q99550 1183 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 NUTM2FA1L443 756 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 ANKRD30BQ9BXX2 1392 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 ATP10BO94823 1461 aa4.62□□□□□ -1.67
CHD9-213ENST00000564845 PKD2Q13563 968 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 SUPT16HQ9Y5B9 1047 aaKnown RBP4.61□□□□□ -1.67
CHD9-213ENST00000564845 DNMT1P26358 1616 aaKnown RBP4.61□□□□□ -1.67
CHD9-213ENST00000564845 IFT140Q96RY7 1462 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 FBLN1P23142 703 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 HECW1Q76N89 1606 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 NBPF1Q3BBV0 1214 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 TONSLQ96HA7 1378 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 SETD5Q9C0A6 1442 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 CLASP1Q7Z460 1538 aa4.61□□□□□ -1.67
CHD9-213ENST00000564845 MAGI1Q96QZ7 1491 aaPredicted RBP4.6□□□□□ -1.67
CHD9-213ENST00000564845 KDM5DQ9BY66 1539 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 ZNF428Q96B54 188 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 ZNF518AQ6AHZ1 1483 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 ATP10AO60312 1499 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 CDH23Q9H251 3354 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 CDC42BPAQ5VT25 1732 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 MROH1Q8NDA8 1641 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 SYNJ2O15056 1496 aa4.6□□□□□ -1.67
CHD9-213ENST00000564845 GGT6Q6P531 493 aa4.59□□□□□ -1.67
CHD9-213ENST00000564845 SUPT6HQ7KZ85 1726 aaKnown RBP4.59□□□□□ -1.67
CHD9-213ENST00000564845 RAPGEF3O95398 923 aa4.59□□□□□ -1.67
CHD9-213ENST00000564845 EHBP1L1Q8N3D4 1523 aa4.59□□□□□ -1.67
CHD9-213ENST00000564845 NEFLP07196 543 aa4.59□□□□□ -1.67
CHD9-213ENST00000564845 VWDEQ8N2E2 1590 aa4.59□□□□□ -1.68
CHD9-213ENST00000564845 WASHC2AQ641Q2 1341 aa4.58□□□□□ -1.68
CHD9-213ENST00000564845 BCORL1Q5H9F3 1711 aa4.58□□□□□ -1.68
CHD9-213ENST00000564845 ROCK1Q13464 1354 aa4.58□□□□□ -1.68
CHD9-213ENST00000564845 SOX12O15370 315 aa4.58□□□□□ -1.68
CHD9-213ENST00000564845 CDK11AQ9UQ88 783 aaPredicted RBP4.58□□□□□ -1.68
CHD9-213ENST00000564845 HMGB2P26583 209 aaKnown RBP4.58□□□□□ -1.68
CHD9-213ENST00000564845 NEUROD2Q15784 382 aa4.58□□□□□ -1.68
CHD9-213ENST00000564845 DHX29Q7Z478 1369 aaKnown RBP4.57□□□□□ -1.68
CHD9-213ENST00000564845 EP400Q96L91 3159 aa4.57□□□□□ -1.68
CHD9-213ENST00000564845 PLIN1O60240 522 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms