RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DISP1Q96F81 1524 aa22.33■■□□□ 1.17
LINC00554-201ENST00000564841 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
LINC00554-201ENST00000564841 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
LINC00554-201ENST00000564841 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
LINC00554-201ENST00000564841 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
LINC00554-201ENST00000564841 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
LINC00554-201ENST00000564841 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
LINC00554-201ENST00000564841 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
LINC00554-201ENST00000564841 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
LINC00554-201ENST00000564841 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
LINC00554-201ENST00000564841 UGGT2Q9NYU1 1516 aa22.29■■□□□ 1.16
LINC00554-201ENST00000564841 RTL5Q5HYW3 569 aaPredicted RBP22.27■■□□□ 1.16
LINC00554-201ENST00000564841 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
LINC00554-201ENST00000564841 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
LINC00554-201ENST00000564841 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
LINC00554-201ENST00000564841 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
LINC00554-201ENST00000564841 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
LINC00554-201ENST00000564841 FOXD1Q16676 465 aa22.24■■□□□ 1.15
LINC00554-201ENST00000564841 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
LINC00554-201ENST00000564841 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
LINC00554-201ENST00000564841 CARMIL2Q6F5E8 1435 aa22.22■■□□□ 1.15
LINC00554-201ENST00000564841 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
LINC00554-201ENST00000564841 IPO9Q96P70 1041 aaKnown RBP22.2■■□□□ 1.14
LINC00554-201ENST00000564841 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
LINC00554-201ENST00000564841 ZBTB47Q9UFB7 747 aaPredicted RBP22.19■■□□□ 1.14
LINC00554-201ENST00000564841 TIMELESSQ9UNS1 1208 aa22.18■■□□□ 1.14
LINC00554-201ENST00000564841 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
LINC00554-201ENST00000564841 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
LINC00554-201ENST00000564841 ANP32AP39687 249 aaKnown RBP22.17■■□□□ 1.14
LINC00554-201ENST00000564841 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
LINC00554-201ENST00000564841 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
LINC00554-201ENST00000564841 PTPN23Q9H3S7 1636 aa22.15■■□□□ 1.14
LINC00554-201ENST00000564841 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
LINC00554-201ENST00000564841 NUP160Q12769 1436 aa22.14■■□□□ 1.14
LINC00554-201ENST00000564841 RAPGEF6Q8TEU7 1601 aa22.12■■□□□ 1.13
LINC00554-201ENST00000564841 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
LINC00554-201ENST00000564841 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
LINC00554-201ENST00000564841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.13
LINC00554-201ENST00000564841 NAIPQ13075 1403 aa22.1■■□□□ 1.13
LINC00554-201ENST00000564841 AKNAQ7Z591 1439 aa22.09■■□□□ 1.13
LINC00554-201ENST00000564841 PTPRGP23470 1445 aa22.08■■□□□ 1.13
LINC00554-201ENST00000564841 C11orf95C9JLR9 678 aaPredicted RBP22.07■■□□□ 1.12
LINC00554-201ENST00000564841 HFM1A2PYH4 1435 aa22.07■■□□□ 1.12
LINC00554-201ENST00000564841 NEFMP07197 916 aa22.04■■□□□ 1.12
LINC00554-201ENST00000564841 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
LINC00554-201ENST00000564841 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
LINC00554-201ENST00000564841 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
LINC00554-201ENST00000564841 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.11
LINC00554-201ENST00000564841 ZBED9Q6R2W3 1325 aa22.02■■□□□ 1.11
LINC00554-201ENST00000564841 BRPF3Q9ULD4 1205 aa22.01■■□□□ 1.11
LINC00554-201ENST00000564841 CHD1O14646 1710 aa21.99■■□□□ 1.11
LINC00554-201ENST00000564841 EIF5BO60841 1220 aaKnown RBP21.99■■□□□ 1.11
LINC00554-201ENST00000564841 HNRNPMP52272 730 aaKnown RBP eCLIP21.97■■□□□ 1.11
LINC00554-201ENST00000564841 MIA2Q96PC5 1412 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 ATP10BO94823 1461 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 KIF14Q15058 1648 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
LINC00554-201ENST00000564841 KDM6BO15054 1643 aa21.95■■□□□ 1.1
LINC00554-201ENST00000564841 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
LINC00554-201ENST00000564841 ABCC5O15440 1437 aa21.94■■□□□ 1.1
LINC00554-201ENST00000564841 DAPK1P53355 1430 aa21.94■■□□□ 1.1
LINC00554-201ENST00000564841 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
LINC00554-201ENST00000564841 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
LINC00554-201ENST00000564841 UBE2Q2Q8WVN8 375 aa21.93■■□□□ 1.1
LINC00554-201ENST00000564841 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
LINC00554-201ENST00000564841 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
LINC00554-201ENST00000564841 GPATCH8Q9UKJ3 1502 aaKnown RBP21.91■■□□□ 1.1
LINC00554-201ENST00000564841 EIF4G2P78344 907 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC00554-201ENST00000564841 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
LINC00554-201ENST00000564841 CAMSAP2Q08AD1 1489 aa21.87■■□□□ 1.09
LINC00554-201ENST00000564841 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 SKAP1Q86WV1 359 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 ABCA8O94911 1581 aa21.84■■□□□ 1.09
LINC00554-201ENST00000564841 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.08
LINC00554-201ENST00000564841 NUDCQ9Y266 331 aa21.83■■□□□ 1.08
LINC00554-201ENST00000564841 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
LINC00554-201ENST00000564841 CCDC7Q96M83 1385 aa21.8■■□□□ 1.08
LINC00554-201ENST00000564841 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
LINC00554-201ENST00000564841 PDE4AP27815 886 aa21.79■■□□□ 1.08
LINC00554-201ENST00000564841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
LINC00554-201ENST00000564841 SMG6Q86US8 1419 aaKnown RBP21.77■■□□□ 1.08
LINC00554-201ENST00000564841 EXOC6Q8TAG9 804 aa21.77■■□□□ 1.08
LINC00554-201ENST00000564841 PKD2Q13563 968 aa21.76■■□□□ 1.07
LINC00554-201ENST00000564841 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
LINC00554-201ENST00000564841 DNMT1P26358 1616 aaKnown RBP21.75■■□□□ 1.07
LINC00554-201ENST00000564841 NCOA1Q15788 1441 aa21.74■■□□□ 1.07
LINC00554-201ENST00000564841 RNF123Q5XPI4 1314 aa21.74■■□□□ 1.07
LINC00554-201ENST00000564841 ANKRD30AQ9BXX3 1397 aa21.74■■□□□ 1.07
LINC00554-201ENST00000564841 KIF7Q2M1P5 1343 aa21.73■■□□□ 1.07
LINC00554-201ENST00000564841 ROCK1Q13464 1354 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 GCC2Q8IWJ2 1684 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 GSE1Q14687 1217 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
LINC00554-201ENST00000564841 USP35Q9P2H5 1018 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
LINC00554-201ENST00000564841 NUP155O75694 1391 aa21.7■■□□□ 1.06
LINC00554-201ENST00000564841 BACH2Q9BYV9 841 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms