RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 ABCC5O15440 1437 aa31.56■■■□□ 2.64
SPSB3-206ENST00000564709 SYNJ2O15056 1496 aa31.55■■■□□ 2.64
SPSB3-206ENST00000564709 PLB1Q6P1J6 1458 aa31.55■■■□□ 2.64
SPSB3-206ENST00000564709 PRG4Q92954 1404 aaPredicted RBP31.55■■■□□ 2.64
SPSB3-206ENST00000564709 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
SPSB3-206ENST00000564709 ROCK1Q13464 1354 aa31.5■■■□□ 2.63
SPSB3-206ENST00000564709 TROQ12816 1431 aaPredicted RBP31.48■■■□□ 2.63
SPSB3-206ENST00000564709 CCER2I3L3R5 266 aa31.47■■■□□ 2.63
SPSB3-206ENST00000564709 KIF14Q15058 1648 aa31.47■■■□□ 2.63
SPSB3-206ENST00000564709 CAMSAP2Q08AD1 1489 aa31.44■■■□□ 2.62
SPSB3-206ENST00000564709 HSPA5P11021 654 aaKnown RBP31.44■■■□□ 2.62
SPSB3-206ENST00000564709 L3MBTL2Q969R5 705 aa31.43■■■□□ 2.62
SPSB3-206ENST00000564709 ITSN2Q9NZM3 1697 aa31.42■■■□□ 2.62
SPSB3-206ENST00000564709 CFDP1Q9UEE9 299 aaPredicted RBP31.4■■■□□ 2.62
SPSB3-206ENST00000564709 NUP160Q12769 1436 aa31.39■■■□□ 2.62
SPSB3-206ENST00000564709 JPH4Q96JJ6 628 aa31.38■■■□□ 2.61
SPSB3-206ENST00000564709 CARMIL2Q6F5E8 1435 aa31.38■■■□□ 2.61
SPSB3-206ENST00000564709 ZNF777Q9ULD5 760 aaPredicted RBP31.38■■■□□ 2.61
SPSB3-206ENST00000564709 ANKRD30BQ9BXX2 1392 aa31.37■■■□□ 2.61
SPSB3-206ENST00000564709 GPATCH8Q9UKJ3 1502 aaKnown RBP31.37■■■□□ 2.61
SPSB3-206ENST00000564709 ADCY10Q96PN6 1610 aa31.37■■■□□ 2.61
SPSB3-206ENST00000564709 WASHC2AQ641Q2 1341 aa31.37■■■□□ 2.61
SPSB3-206ENST00000564709 SLC4A1APQ9BWU0 796 aaKnown RBP31.35■■■□□ 2.61
SPSB3-206ENST00000564709 ADGBQ8N7X0 1667 aa31.34■■■□□ 2.61
SPSB3-206ENST00000564709 RPRD2Q5VT52 1461 aaKnown RBP31.34■■■□□ 2.61
SPSB3-206ENST00000564709 EIF4G2P78344 907 aaKnown RBP eCLIP31.32■■■□□ 2.6
SPSB3-206ENST00000564709 CROCC2H7BZ55 1655 aa31.3■■■□□ 2.6
SPSB3-206ENST00000564709 TEX14Q8IWB6 1497 aa31.3■■■□□ 2.6
SPSB3-206ENST00000564709 PZPP20742 1482 aa31.27■■■□□ 2.6
SPSB3-206ENST00000564709 NCOA1Q15788 1441 aa31.27■■■□□ 2.6
SPSB3-206ENST00000564709 NBPF8Q3BBV2 869 aa31.26■■■□□ 2.59
SPSB3-206ENST00000564709 ABCA8O94911 1581 aa31.24■■■□□ 2.59
SPSB3-206ENST00000564709 BCANQ96GW7 911 aa31.24■■■□□ 2.59
SPSB3-206ENST00000564709 CDC42BPAQ5VT25 1732 aa31.23■■■□□ 2.59
SPSB3-206ENST00000564709 FKBP8Q14318 412 aa31.21■■■□□ 2.59
SPSB3-206ENST00000564709 ADGRL2O95490 1459 aa31.2■■■□□ 2.58
SPSB3-206ENST00000564709 C11orf95C9JLR9 678 aaPredicted RBP31.19■■■□□ 2.58
SPSB3-206ENST00000564709 ATP10BO94823 1461 aa31.18■■■□□ 2.58
SPSB3-206ENST00000564709 PLEKHD1A6NEE1 506 aa31.17■■■□□ 2.58
SPSB3-206ENST00000564709 CNTLNQ9NXG0 1405 aa31.16■■■□□ 2.58
SPSB3-206ENST00000564709 ANKRD30AQ9BXX3 1397 aa31.14■■■□□ 2.58
SPSB3-206ENST00000564709 ABCC10Q5T3U5 1492 aa31.14■■■□□ 2.58
SPSB3-206ENST00000564709 CCDC7Q96M83 1385 aa31.13■■■□□ 2.57
SPSB3-206ENST00000564709 KIAA1107Q9UPP5 1409 aa31.1■■■□□ 2.57
SPSB3-206ENST00000564709 ANKRD50Q9ULJ7 1429 aa31.09■■■□□ 2.57
SPSB3-206ENST00000564709 PKD2Q13563 968 aa31.08■■■□□ 2.57
SPSB3-206ENST00000564709 HNRNPUQ00839 825 aaKnown RBP eCLIP31.06■■■□□ 2.56
SPSB3-206ENST00000564709 C9orf84Q5VXU9 1444 aa31.06■■■□□ 2.56
SPSB3-206ENST00000564709 SPATA31E1Q6ZUB1 1445 aa31.04■■■□□ 2.56
SPSB3-206ENST00000564709 NEFLP07196 543 aa31.04■■■□□ 2.56
SPSB3-206ENST00000564709 POLR1AO95602 1720 aaPredicted RBP31.03■■■□□ 2.56
SPSB3-206ENST00000564709 MBD5Q9P267 1494 aa31.02■■■□□ 2.56
SPSB3-206ENST00000564709 CCDC184Q52MB2 194 aa31.02■■■□□ 2.56
SPSB3-206ENST00000564709 ZNF326Q5BKZ1 582 aaKnown RBP31.02■■■□□ 2.56
SPSB3-206ENST00000564709 SHANK2Q9UPX8 1470 aa31.01■■■□□ 2.55
SPSB3-206ENST00000564709 KIF7Q2M1P5 1343 aa31■■■□□ 2.55
SPSB3-206ENST00000564709 PTPRGP23470 1445 aa31■■■□□ 2.55
SPSB3-206ENST00000564709 TSHZ2Q9NRE2 1034 aa30.99■■■□□ 2.55
SPSB3-206ENST00000564709 CHD1O14646 1710 aa30.98■■■□□ 2.55
SPSB3-206ENST00000564709 NUP155O75694 1391 aa30.97■■■□□ 2.55
SPSB3-206ENST00000564709 HNRNPMP52272 730 aaKnown RBP eCLIP30.97■■■□□ 2.55
SPSB3-206ENST00000564709 PRKRIP1Q9H875 184 aaPredicted RBP30.95■■■□□ 2.55
SPSB3-206ENST00000564709 TSPY4P0CV99 314 aa30.93■■■□□ 2.54
SPSB3-206ENST00000564709 TSPY10P0CW01 314 aa30.93■■■□□ 2.54
SPSB3-206ENST00000564709 CDC42BPBQ9Y5S2 1711 aa30.91■■■□□ 2.54
SPSB3-206ENST00000564709 KIF15Q9NS87 1388 aa30.91■■■□□ 2.54
SPSB3-206ENST00000564709 SAMD9LQ8IVG5 1584 aa30.9■■■□□ 2.54
SPSB3-206ENST00000564709 ARHGEF5Q12774 1597 aa30.89■■■□□ 2.54
SPSB3-206ENST00000564709 BCORL1Q5H9F3 1711 aa30.89■■■□□ 2.53
SPSB3-206ENST00000564709 USP47Q96K76 1375 aa30.88■■■□□ 2.53
SPSB3-206ENST00000564709 PREX2Q70Z35 1606 aa30.88■■■□□ 2.53
SPSB3-206ENST00000564709 KDM5DQ9BY66 1539 aa30.85■■■□□ 2.53
SPSB3-206ENST00000564709 FAM9BQ8IZU0 186 aa30.85■■■□□ 2.53
SPSB3-206ENST00000564709 MRS2Q9HD23 443 aa30.85■■■□□ 2.53
SPSB3-206ENST00000564709 POLR3GLQ9BT43 218 aa30.84■■■□□ 2.53
SPSB3-206ENST00000564709 KDM5CP41229 1560 aa30.84■■■□□ 2.53
SPSB3-206ENST00000564709 CCDC141Q6ZP82 1450 aa30.82■■■□□ 2.52
SPSB3-206ENST00000564709 TTC37Q6PGP7 1564 aa30.8■■■□□ 2.52
SPSB3-206ENST00000564709 CNGB1Q14028 1251 aaPredicted RBP30.79■■■□□ 2.52
SPSB3-206ENST00000564709 ERCC6L2Q5T890 1561 aa30.77■■■□□ 2.52
SPSB3-206ENST00000564709 SYCP2Q9BX26 1530 aa30.77■■■□□ 2.52
SPSB3-206ENST00000564709 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
SPSB3-206ENST00000564709 IRX6P78412 446 aaPredicted RBP30.75■■■□□ 2.51
SPSB3-206ENST00000564709 KDM2AQ9Y2K7 1162 aa30.75■■■□□ 2.51
SPSB3-206ENST00000564709 RALGAPBQ86X10 1494 aa30.75■■■□□ 2.51
SPSB3-206ENST00000564709 UHRF1BP1Q6BDS2 1440 aa30.75■■■□□ 2.51
SPSB3-206ENST00000564709 ARHGAP5Q13017 1502 aa30.74■■■□□ 2.51
SPSB3-206ENST00000564709 ARHGEF12Q9NZN5 1544 aa30.73■■■□□ 2.51
SPSB3-206ENST00000564709 DHX29Q7Z478 1369 aaKnown RBP30.72■■■□□ 2.51
SPSB3-206ENST00000564709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.72■■■□□ 2.51
SPSB3-206ENST00000564709 FAM135AQ9P2D6 1515 aa30.72■■■□□ 2.51
SPSB3-206ENST00000564709 CARD11Q9BXL7 1154 aa30.7■■■□□ 2.5
SPSB3-206ENST00000564709 DCAF11Q8TEB1 546 aa30.68■■■□□ 2.5
SPSB3-206ENST00000564709 MYO5CQ9NQX4 1742 aa30.65■■■□□ 2.5
SPSB3-206ENST00000564709 ABCC2Q92887 1545 aa30.65■■■□□ 2.5
SPSB3-206ENST00000564709 RSPH4AQ5TD94 716 aa30.62■■■□□ 2.49
SPSB3-206ENST00000564709 ZBED9Q6R2W3 1325 aa30.61■■■□□ 2.49
SPSB3-206ENST00000564709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.61■■■□□ 2.491e-6■■■□□ 17.1
SPSB3-206ENST00000564709 MAST1Q9Y2H9 1570 aa30.6■■■□□ 2.49
SPSB3-206ENST00000564709 UNC13BO14795 1591 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms