RNA–Protein interactions for RNA: ENST00000564492.1

LINC00261-202, long intergenic non-protein coding RNA 261, humanhuman

TSL 3 BASIC

Gene LINC00261, Length 4,912 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00261-202ENST00000564492 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
LINC00261-202ENST00000564492 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
LINC00261-202ENST00000564492 NESP48681 1621 aa10.3□□□□□ -0.76
LINC00261-202ENST00000564492 WASHC2AQ641Q2 1341 aa10.3□□□□□ -0.76
LINC00261-202ENST00000564492 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
LINC00261-202ENST00000564492 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
LINC00261-202ENST00000564492 RGS3P49796 1198 aa10.29□□□□□ -0.76
LINC00261-202ENST00000564492 NAP1L2Q9ULW6 460 aaPredicted RBP10.29□□□□□ -0.76
LINC00261-202ENST00000564492 WASHC2CQ9Y4E1 1318 aa10.29□□□□□ -0.76
LINC00261-202ENST00000564492 GOLGA6L3A6NEY3 463 aa10.29□□□□□ -0.76
LINC00261-202ENST00000564492 MLECQ14165 292 aa10.29□□□□□ -0.76
LINC00261-202ENST00000564492 CYB5RLQ6IPT4 315 aa10.29□□□□□ -0.76
LINC00261-202ENST00000564492 TCERG1O14776 1098 aaKnown RBP10.28□□□□□ -0.76
LINC00261-202ENST00000564492 TPM2P07951 284 aa10.28□□□□□ -0.76
LINC00261-202ENST00000564492 RAD54L2Q9Y4B4 1467 aa10.28□□□□□ -0.76
LINC00261-202ENST00000564492 BECN1Q14457 450 aa10.27□□□□□ -0.77
LINC00261-202ENST00000564492 DNTTIP2Q5QJE6 756 aaKnown RBP10.27□□□□□ -0.77
LINC00261-202ENST00000564492 RAPGEF2Q9Y4G8 1499 aa10.26□□□□□ -0.77
LINC00261-202ENST00000564492 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
LINC00261-202ENST00000564492 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
LINC00261-202ENST00000564492 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
LINC00261-202ENST00000564492 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
LINC00261-202ENST00000564492 MSNP26038 577 aaKnown RBP10.25□□□□□ -0.77
LINC00261-202ENST00000564492 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
LINC00261-202ENST00000564492 MAP7D2Q96T17 732 aa10.24□□□□□ -0.77
LINC00261-202ENST00000564492 FHOD3Q2V2M9 1422 aa10.24□□□□□ -0.77
LINC00261-202ENST00000564492 CFTRP13569 1480 aa10.24□□□□□ -0.77
LINC00261-202ENST00000564492 PDE4AP27815 886 aa10.23□□□□□ -0.77
LINC00261-202ENST00000564492 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
LINC00261-202ENST00000564492 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
LINC00261-202ENST00000564492 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■■■■■ 44.3
LINC00261-202ENST00000564492 CCNB3Q8WWL7 1395 aa10.23□□□□□ -0.77
LINC00261-202ENST00000564492 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
LINC00261-202ENST00000564492 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
LINC00261-202ENST00000564492 IGF1RP08069 1367 aa10.21□□□□□ -0.77
LINC00261-202ENST00000564492 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
LINC00261-202ENST00000564492 MYH16Q9H6N6 1097 aa10.21□□□□□ -0.77
LINC00261-202ENST00000564492 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.78
LINC00261-202ENST00000564492 GGT6Q6P531 493 aa10.21□□□□□ -0.78
LINC00261-202ENST00000564492 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.78
LINC00261-202ENST00000564492 FOXD1Q16676 465 aa10.21□□□□□ -0.78
LINC00261-202ENST00000564492 UPF2Q9HAU5 1272 aaKnown RBP10.21□□□□□ -0.78
LINC00261-202ENST00000564492 CARMIL2Q6F5E8 1435 aa10.2□□□□□ -0.78
LINC00261-202ENST00000564492 OSCARQ8IYS5 282 aa10.2□□□□□ -0.78
LINC00261-202ENST00000564492 ZHX1Q9UKY1 873 aaPredicted RBP10.19□□□□□ -0.78
LINC00261-202ENST00000564492 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
LINC00261-202ENST00000564492 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
LINC00261-202ENST00000564492 SENP3-EIF4A1A0A087X0R7 540 aa10.18□□□□□ -0.78
LINC00261-202ENST00000564492 PPP1R15AO75807 674 aaPredicted RBP10.18□□□□□ -0.78
LINC00261-202ENST00000564492 APPP05067 770 aa10.17□□□□□ -0.78
LINC00261-202ENST00000564492 FRAT2O75474 233 aaPredicted RBP10.17□□□□□ -0.78
LINC00261-202ENST00000564492 HNRNPMP52272 730 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00261-202ENST00000564492 MTERF4Q7Z6M4 381 aaKnown RBP10.16□□□□□ -0.78
LINC00261-202ENST00000564492 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
LINC00261-202ENST00000564492 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
LINC00261-202ENST00000564492 GAPVD1Q14C86 1478 aa10.15□□□□□ -0.79
LINC00261-202ENST00000564492 PTMSP20962 102 aa10.14□□□□□ -0.79
LINC00261-202ENST00000564492 EFCAB2Q5VUJ9 269 aa10.13□□□□□ -0.79
LINC00261-202ENST00000564492 RRAGDQ9NQL2 400 aaPredicted RBP10.13□□□□□ -0.79
LINC00261-202ENST00000564492 PRDM10Q9NQV6 1147 aa10.13□□□□□ -0.79
LINC00261-202ENST00000564492 TNNT3P45378 269 aaPredicted RBP10.13□□□□□ -0.79
LINC00261-202ENST00000564492 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.13□□□□□ -0.79
LINC00261-202ENST00000564492 SLKQ9H2G2 1235 aaPredicted RBP10.13□□□□□ -0.79
LINC00261-202ENST00000564492 CLCN1P35523 988 aa10.12□□□□□ -0.79
LINC00261-202ENST00000564492 MS4A1P11836 297 aa10.12□□□□□ -0.79
LINC00261-202ENST00000564492 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
LINC00261-202ENST00000564492 IPO4Q8TEX9 1081 aaKnown RBP10.12□□□□□ -0.79
LINC00261-202ENST00000564492 PTPRGP23470 1445 aa10.11□□□□□ -0.79
LINC00261-202ENST00000564492 FMN1Q68DA7 1419 aa10.11□□□□□ -0.79
LINC00261-202ENST00000564492 TMC1Q8TDI8 760 aa10.11□□□□□ -0.79
LINC00261-202ENST00000564492 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC00261-202ENST00000564492 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
LINC00261-202ENST00000564492 ZNF771Q7L3S4 317 aaPredicted RBP10.1□□□□□ -0.79
LINC00261-202ENST00000564492 DNMBPQ6XZF7 1577 aa10.09□□□□□ -0.79
LINC00261-202ENST00000564492 ESPNB1AK53 854 aa10.09□□□□□ -0.79
LINC00261-202ENST00000564492 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
LINC00261-202ENST00000564492 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
LINC00261-202ENST00000564492 PKD2Q13563 968 aa10.09□□□□□ -0.79
LINC00261-202ENST00000564492 DCAF11Q8TEB1 546 aa10.09□□□□□ -0.79
LINC00261-202ENST00000564492 KIF3BO15066 747 aa10.09□□□□□ -0.79
LINC00261-202ENST00000564492 PTMAP06454 111 aaKnown RBP10.08□□□□□ -0.8
LINC00261-202ENST00000564492 R3HCC1Q9Y3T6 440 aaKnown RBP10.08□□□□□ -0.8
LINC00261-202ENST00000564492 TAF3Q5VWG9 929 aa10.08□□□□□ -0.8
LINC00261-202ENST00000564492 CARD11Q9BXL7 1154 aa10.08□□□□□ -0.8
LINC00261-202ENST00000564492 SAFB2Q14151 953 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00261-202ENST00000564492 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
LINC00261-202ENST00000564492 MRE11P49959 708 aa10.07□□□□□ -0.8
LINC00261-202ENST00000564492 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
LINC00261-202ENST00000564492 DHX57Q6P158 1386 aaKnown RBP10.07□□□□□ -0.8
LINC00261-202ENST00000564492 GRIN2BQ13224 1484 aa10.07□□□□□ -0.8
LINC00261-202ENST00000564492 SMAP1Q8IYB5 467 aaPredicted RBP10.07□□□□□ -0.8
LINC00261-202ENST00000564492 NUDCQ9Y266 331 aa10.06□□□□□ -0.8
LINC00261-202ENST00000564492 ZNF644Q9H582 1327 aaPredicted RBP10.06□□□□□ -0.8
LINC00261-202ENST00000564492 ARHGAP35Q9NRY4 1499 aa10.06□□□□□ -0.8
LINC00261-202ENST00000564492 ZBTB7CA1YPR0 619 aa10.06□□□□□ -0.8
LINC00261-202ENST00000564492 BACH2Q9BYV9 841 aa10.06□□□□□ -0.8
LINC00261-202ENST00000564492 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
LINC00261-202ENST00000564492 VGLL3A8MV65 326 aa10.05□□□□□ -0.8
LINC00261-202ENST00000564492 GOLGA6L22H0YM25 854 aa10.05□□□□□ -0.8
LINC00261-202ENST00000564492 FTSJ3Q8IY81 847 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms