RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
AC138869.3-201ENST00000563960 HECW1Q76N89 1606 aa12.79□□□□□ -0.36
AC138869.3-201ENST00000563960 PLEKHD1A6NEE1 506 aa12.79□□□□□ -0.36
AC138869.3-201ENST00000563960 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
AC138869.3-201ENST00000563960 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
AC138869.3-201ENST00000563960 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
AC138869.3-201ENST00000563960 MAGI3Q5TCQ9 1506 aa12.77□□□□□ -0.37
AC138869.3-201ENST00000563960 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
AC138869.3-201ENST00000563960 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
AC138869.3-201ENST00000563960 EIF5BO60841 1220 aaKnown RBP12.76□□□□□ -0.37
AC138869.3-201ENST00000563960 ADCY10Q96PN6 1610 aa12.75□□□□□ -0.37
AC138869.3-201ENST00000563960 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
AC138869.3-201ENST00000563960 UHRF1BP1LA0JNW5 1464 aa12.74□□□□□ -0.37
AC138869.3-201ENST00000563960 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
AC138869.3-201ENST00000563960 PHLDB1Q86UU1 1377 aa12.72□□□□□ -0.37
AC138869.3-201ENST00000563960 PKNOX2Q96KN3 472 aa12.72□□□□□ -0.37
AC138869.3-201ENST00000563960 KDM5BQ9UGL1 1544 aa12.71□□□□□ -0.37
AC138869.3-201ENST00000563960 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
AC138869.3-201ENST00000563960 CFAP43Q8NDM7 1665 aa12.71□□□□□ -0.38
AC138869.3-201ENST00000563960 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
AC138869.3-201ENST00000563960 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
AC138869.3-201ENST00000563960 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
AC138869.3-201ENST00000563960 NCOA2Q15596 1464 aa12.69□□□□□ -0.38
AC138869.3-201ENST00000563960 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
AC138869.3-201ENST00000563960 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
AC138869.3-201ENST00000563960 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
AC138869.3-201ENST00000563960 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
AC138869.3-201ENST00000563960 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
AC138869.3-201ENST00000563960 ZNF644Q9H582 1327 aaPredicted RBP12.65□□□□□ -0.38
AC138869.3-201ENST00000563960 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
AC138869.3-201ENST00000563960 KIF14Q15058 1648 aa12.64□□□□□ -0.39
AC138869.3-201ENST00000563960 RTL5Q5HYW3 569 aaPredicted RBP12.64□□□□□ -0.39
AC138869.3-201ENST00000563960 CFDP1Q9UEE9 299 aaPredicted RBP12.63□□□□□ -0.39
AC138869.3-201ENST00000563960 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
AC138869.3-201ENST00000563960 WDR7Q9Y4E6 1490 aa12.62□□□□□ -0.39
AC138869.3-201ENST00000563960 SUPT6HQ7KZ85 1726 aaKnown RBP12.61□□□□□ -0.39
AC138869.3-201ENST00000563960 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
AC138869.3-201ENST00000563960 RRBP1Q9P2E9 1410 aaKnown RBP12.6□□□□□ -0.39
AC138869.3-201ENST00000563960 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
AC138869.3-201ENST00000563960 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
AC138869.3-201ENST00000563960 FGD6Q6ZV73 1430 aa12.59□□□□□ -0.39
AC138869.3-201ENST00000563960 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
AC138869.3-201ENST00000563960 ABCC10Q5T3U5 1492 aa12.58□□□□□ -0.39
AC138869.3-201ENST00000563960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.58□□□□□ -0.4
AC138869.3-201ENST00000563960 CCER2I3L3R5 266 aa12.56□□□□□ -0.4
AC138869.3-201ENST00000563960 WASHC2AQ641Q2 1341 aa12.56□□□□□ -0.4
AC138869.3-201ENST00000563960 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
AC138869.3-201ENST00000563960 HNRNPMP52272 730 aaKnown RBP eCLIP12.56□□□□□ -0.4
AC138869.3-201ENST00000563960 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
AC138869.3-201ENST00000563960 TTC37Q6PGP7 1564 aa12.56□□□□□ -0.4
AC138869.3-201ENST00000563960 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
AC138869.3-201ENST00000563960 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
AC138869.3-201ENST00000563960 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
AC138869.3-201ENST00000563960 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
AC138869.3-201ENST00000563960 MAPKBP1O60336 1514 aa12.53□□□□□ -0.4
AC138869.3-201ENST00000563960 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
AC138869.3-201ENST00000563960 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.4
AC138869.3-201ENST00000563960 IPO9Q96P70 1041 aaKnown RBP12.52□□□□□ -0.4
AC138869.3-201ENST00000563960 PLCH2O75038 1416 aa12.52□□□□□ -0.41
AC138869.3-201ENST00000563960 CD109Q6YHK3 1445 aa12.52□□□□□ -0.41
AC138869.3-201ENST00000563960 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
AC138869.3-201ENST00000563960 ARHGAP5Q13017 1502 aa12.51□□□□□ -0.41
AC138869.3-201ENST00000563960 WASHC2CQ9Y4E1 1318 aa12.51□□□□□ -0.41
AC138869.3-201ENST00000563960 PTPN23Q9H3S7 1636 aa12.5□□□□□ -0.41
AC138869.3-201ENST00000563960 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
AC138869.3-201ENST00000563960 CDC42BPAQ5VT25 1732 aa12.49□□□□□ -0.41
AC138869.3-201ENST00000563960 ZBTB47Q9UFB7 747 aaPredicted RBP12.49□□□□□ -0.41
AC138869.3-201ENST00000563960 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
AC138869.3-201ENST00000563960 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
AC138869.3-201ENST00000563960 RRP7BPQ9NSQ0 103 aa12.48□□□□□ -0.41
AC138869.3-201ENST00000563960 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
AC138869.3-201ENST00000563960 CAMSAP2Q08AD1 1489 aa12.48□□□□□ -0.41
AC138869.3-201ENST00000563960 ANP32CO43423 234 aa12.47□□□□□ -0.41
AC138869.3-201ENST00000563960 ANP32AP39687 249 aaKnown RBP12.47□□□□□ -0.41
AC138869.3-201ENST00000563960 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
AC138869.3-201ENST00000563960 FANCAO15360 1455 aa12.46□□□□□ -0.41
AC138869.3-201ENST00000563960 CDC42BPBQ9Y5S2 1711 aa12.46□□□□□ -0.41
AC138869.3-201ENST00000563960 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.41
AC138869.3-201ENST00000563960 ABCA9Q8IUA7 1624 aa12.46□□□□□ -0.41
AC138869.3-201ENST00000563960 TCOF1Q13428 1488 aaKnown RBP12.46□□□□□ -0.42
AC138869.3-201ENST00000563960 ABCC5O15440 1437 aa12.45□□□□□ -0.42
AC138869.3-201ENST00000563960 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
AC138869.3-201ENST00000563960 PREX2Q70Z35 1606 aa12.45□□□□□ -0.42
AC138869.3-201ENST00000563960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 ARHGEF12Q9NZN5 1544 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 DIP2BQ9P265 1576 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 MYO5CQ9NQX4 1742 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
AC138869.3-201ENST00000563960 RAB3GAP2Q9H2M9 1393 aa12.43□□□□□ -0.42
AC138869.3-201ENST00000563960 DAPK1P53355 1430 aa12.43□□□□□ -0.42
AC138869.3-201ENST00000563960 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
AC138869.3-201ENST00000563960 SCAPERQ9BY12 1400 aa12.43□□□□□ -0.42
AC138869.3-201ENST00000563960 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
AC138869.3-201ENST00000563960 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
AC138869.3-201ENST00000563960 MBD5Q9P267 1494 aa12.42□□□□□ -0.42
AC138869.3-201ENST00000563960 TRAPPC8Q9Y2L5 1435 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms