RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 ARID4BQ4LE39 1312 aaPredicted RBP30.53■■■□□ 2.48
CBFB-204ENST00000563939 ZNF777Q9ULD5 760 aaPredicted RBP30.49■■■□□ 2.47
CBFB-204ENST00000563939 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
CBFB-204ENST00000563939 RICTORQ6R327 1708 aa30.47■■■□□ 2.47
CBFB-204ENST00000563939 AFAP1Q8N556 730 aa30.46■■■□□ 2.47
CBFB-204ENST00000563939 POGZQ7Z3K3 1410 aa30.46■■■□□ 2.47
CBFB-204ENST00000563939 CCNB3Q8WWL7 1395 aa30.41■■■□□ 2.46
CBFB-204ENST00000563939 CFDP1Q9UEE9 299 aaPredicted RBP30.41■■■□□ 2.46
CBFB-204ENST00000563939 VPS8Q8N3P4 1428 aa30.4■■■□□ 2.46
CBFB-204ENST00000563939 YEATS2Q9ULM3 1422 aa30.4■■■□□ 2.46
CBFB-204ENST00000563939 MAGI2Q86UL8 1455 aa30.4■■■□□ 2.46
CBFB-204ENST00000563939 CDC42BPBQ9Y5S2 1711 aa30.4■■■□□ 2.46
CBFB-204ENST00000563939 ZMYM4Q5VZL5 1548 aa30.38■■■□□ 2.45
CBFB-204ENST00000563939 GPATCH8Q9UKJ3 1502 aaKnown RBP30.38■■■□□ 2.45
CBFB-204ENST00000563939 ZFYVE16Q7Z3T8 1539 aa30.37■■■□□ 2.45
CBFB-204ENST00000563939 PREX2Q70Z35 1606 aa30.37■■■□□ 2.45
CBFB-204ENST00000563939 ZNF518AQ6AHZ1 1483 aa30.36■■■□□ 2.45
CBFB-204ENST00000563939 ARHGEF40Q8TER5 1519 aa30.35■■■□□ 2.45
CBFB-204ENST00000563939 CDC42BPAQ5VT25 1732 aa30.33■■■□□ 2.45
CBFB-204ENST00000563939 HNRNPMP52272 730 aaKnown RBP eCLIP30.32■■■□□ 2.444e-8■■■■■ 27.4
CBFB-204ENST00000563939 EHBP1L1Q8N3D4 1523 aa30.31■■■□□ 2.44
CBFB-204ENST00000563939 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
CBFB-204ENST00000563939 ARHGEF12Q9NZN5 1544 aa30.3■■■□□ 2.44
CBFB-204ENST00000563939 MLECQ14165 292 aa30.29■■■□□ 2.44
CBFB-204ENST00000563939 ATP10AO60312 1499 aa30.28■■■□□ 2.44
CBFB-204ENST00000563939 ABCC1P33527 1531 aa30.27■■■□□ 2.44
CBFB-204ENST00000563939 APLP2Q06481 763 aa30.26■■■□□ 2.43
CBFB-204ENST00000563939 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
CBFB-204ENST00000563939 ZNF644Q9H582 1327 aaPredicted RBP30.22■■■□□ 2.43
CBFB-204ENST00000563939 KANK4Q5T7N3 995 aaPredicted RBP30.22■■■□□ 2.43
CBFB-204ENST00000563939 KDM5CP41229 1560 aa30.22■■■□□ 2.43
CBFB-204ENST00000563939 SAMD9LQ8IVG5 1584 aa30.21■■■□□ 2.43
CBFB-204ENST00000563939 C9orf84Q5VXU9 1444 aa30.21■■■□□ 2.43
CBFB-204ENST00000563939 MLH3Q9UHC1 1453 aa30.2■■■□□ 2.43
CBFB-204ENST00000563939 BCORL1Q5H9F3 1711 aa30.2■■■□□ 2.43
CBFB-204ENST00000563939 ADAMTSL3P82987 1691 aa30.2■■■□□ 2.42
CBFB-204ENST00000563939 SPAG9O60271 1321 aaKnown RBP30.2■■■□□ 2.42
CBFB-204ENST00000563939 NCOA2Q15596 1464 aa30.19■■■□□ 2.42
CBFB-204ENST00000563939 PLEKHH2Q8IVE3 1493 aa30.19■■■□□ 2.42
CBFB-204ENST00000563939 KIAA1107Q9UPP5 1409 aa30.19■■■□□ 2.42
CBFB-204ENST00000563939 ITSN2Q9NZM3 1697 aa30.18■■■□□ 2.42
CBFB-204ENST00000563939 LRRC9Q6ZRR7 1453 aa30.18■■■□□ 2.42
CBFB-204ENST00000563939 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
CBFB-204ENST00000563939 HECW2Q9P2P5 1572 aa30.16■■■□□ 2.42
CBFB-204ENST00000563939 PLPPR3Q6T4P5 718 aa30.16■■■□□ 2.42
CBFB-204ENST00000563939 PTPRMP28827 1452 aa30.16■■■□□ 2.42
CBFB-204ENST00000563939 SUPT6HQ7KZ85 1726 aaKnown RBP30.14■■■□□ 2.42
CBFB-204ENST00000563939 MAP3K1Q13233 1512 aa30.12■■■□□ 2.41
CBFB-204ENST00000563939 MADDQ8WXG6 1647 aa30.11■■■□□ 2.41
CBFB-204ENST00000563939 SIGLEC1Q9BZZ2 1709 aa30.11■■■□□ 2.41
CBFB-204ENST00000563939 DIP2CQ9Y2E4 1556 aa30.09■■■□□ 2.41
CBFB-204ENST00000563939 ABCA6Q8N139 1617 aa30.05■■■□□ 2.4
CBFB-204ENST00000563939 KIDINS220Q9ULH0 1771 aa30.04■■■□□ 2.4
CBFB-204ENST00000563939 RIMS1Q86UR5 1692 aaKnown RBP30.02■■■□□ 2.4
CBFB-204ENST00000563939 MBD5Q9P267 1494 aa30.02■■■□□ 2.4
CBFB-204ENST00000563939 RSPH4AQ5TD94 716 aa30.02■■■□□ 2.4
CBFB-204ENST00000563939 ESF1Q9H501 851 aaKnown RBP30.02■■■□□ 2.4
CBFB-204ENST00000563939 CAMSAP2Q08AD1 1489 aa29.99■■■□□ 2.39
CBFB-204ENST00000563939 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
CBFB-204ENST00000563939 ATP7AQ04656 1500 aa29.98■■■□□ 2.39
CBFB-204ENST00000563939 TSPY4P0CV99 314 aa29.96■■■□□ 2.39
CBFB-204ENST00000563939 TSPY10P0CW01 314 aa29.96■■■□□ 2.39
CBFB-204ENST00000563939 CEBPAP49715 358 aaPredicted RBP29.95■■■□□ 2.39
CBFB-204ENST00000563939 AGLP35573 1532 aa29.95■■■□□ 2.38
CBFB-204ENST00000563939 MYOM3Q5VTT5 1437 aa29.93■■■□□ 2.38
CBFB-204ENST00000563939 FER1L4A9Z1Z3 1794 aa29.92■■■□□ 2.38
CBFB-204ENST00000563939 A2MP01023 1474 aa29.91■■■□□ 2.38
CBFB-204ENST00000563939 CCDC141Q6ZP82 1450 aa29.91■■■□□ 2.38
CBFB-204ENST00000563939 INO80Q9ULG1 1556 aaPredicted RBP29.9■■■□□ 2.38
CBFB-204ENST00000563939 RTEL1-TNFRSF6BF6WH68 1400 aa29.9■■■□□ 2.38
CBFB-204ENST00000563939 MIA2Q96PC5 1412 aa29.89■■■□□ 2.38
CBFB-204ENST00000563939 GGT6Q6P531 493 aa29.88■■■□□ 2.37
CBFB-204ENST00000563939 DHX29Q7Z478 1369 aaKnown RBP29.82■■■□□ 2.36
CBFB-204ENST00000563939 ARHGEF5Q12774 1597 aa29.81■■■□□ 2.36
CBFB-204ENST00000563939 KIF3BO15066 747 aa29.79■■■□□ 2.36
CBFB-204ENST00000563939 HSPA2P54652 639 aa29.78■■■□□ 2.36
CBFB-204ENST00000563939 CNTLNQ9NXG0 1405 aa29.78■■■□□ 2.36
CBFB-204ENST00000563939 ADGBQ8N7X0 1667 aa29.77■■■□□ 2.36
CBFB-204ENST00000563939 LMTK3Q96Q04 1460 aa29.76■■■□□ 2.35
CBFB-204ENST00000563939 PLXNC1O60486 1568 aa29.76■■■□□ 2.35
CBFB-204ENST00000563939 PPP6R1Q9UPN7 881 aa29.74■■■□□ 2.35
CBFB-204ENST00000563939 ZMYM3Q14202 1370 aa29.73■■■□□ 2.35
CBFB-204ENST00000563939 FGD6Q6ZV73 1430 aa29.72■■■□□ 2.35
CBFB-204ENST00000563939 PPARGC1BQ86YN6 1023 aaKnown RBP29.69■■■□□ 2.34
CBFB-204ENST00000563939 PTPN23Q9H3S7 1636 aa29.69■■■□□ 2.34
CBFB-204ENST00000563939 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
CBFB-204ENST00000563939 ABCC5O15440 1437 aa29.65■■■□□ 2.34
CBFB-204ENST00000563939 RRP7BPQ9NSQ0 103 aa29.65■■■□□ 2.34
CBFB-204ENST00000563939 C3P01024 1663 aa29.65■■■□□ 2.34
CBFB-204ENST00000563939 CHIC2Q9UKJ5 165 aa29.64■■■□□ 2.34
CBFB-204ENST00000563939 UHRF1BP1Q6BDS2 1440 aa29.63■■■□□ 2.33
CBFB-204ENST00000563939 MAST1Q9Y2H9 1570 aa29.63■■■□□ 2.33
CBFB-204ENST00000563939 WASHC2CQ9Y4E1 1318 aa29.63■■■□□ 2.33
CBFB-204ENST00000563939 TCOF1Q13428 1488 aaKnown RBP29.61■■■□□ 2.33
CBFB-204ENST00000563939 DAPK1P53355 1430 aa29.6■■■□□ 2.33
CBFB-204ENST00000563939 CLTCQ00610 1675 aaKnown RBP29.6■■■□□ 2.33
CBFB-204ENST00000563939 SETD1BQ9UPS6 1966 aaKnown RBP29.58■■■□□ 2.33
CBFB-204ENST00000563939 PREX1Q8TCU6 1659 aa29.56■■■□□ 2.32
CBFB-204ENST00000563939 MROH2AA6NES4 1674 aa29.56■■■□□ 2.32
CBFB-204ENST00000563939 NPATQ14207 1427 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms