RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 ABCC5O15440 1437 aa30.21■■■□□ 2.43
LINC00565-201ENST00000562710 RPRD2Q5VT52 1461 aaKnown RBP30.21■■■□□ 2.43
LINC00565-201ENST00000562710 DISP1Q96F81 1524 aa30.2■■■□□ 2.42
LINC00565-201ENST00000562710 KIAA0586Q9BVV6 1533 aa30.2■■■□□ 2.42
LINC00565-201ENST00000562710 NCOA1Q15788 1441 aa30.19■■■□□ 2.42
LINC00565-201ENST00000562710 ANP32EQ9BTT0 268 aa30.18■■■□□ 2.42
LINC00565-201ENST00000562710 NUP153P49790 1475 aaKnown RBP30.17■■■□□ 2.42
LINC00565-201ENST00000562710 CCDC7Q96M83 1385 aa30.16■■■□□ 2.42
LINC00565-201ENST00000562710 ZNF608Q9ULD9 1512 aaPredicted RBP30.16■■■□□ 2.42
LINC00565-201ENST00000562710 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
LINC00565-201ENST00000562710 TEX14Q8IWB6 1497 aa30.15■■■□□ 2.42
LINC00565-201ENST00000562710 RAPGEF6Q8TEU7 1601 aa30.14■■■□□ 2.42
LINC00565-201ENST00000562710 C11orf95C9JLR9 678 aaPredicted RBP30.14■■■□□ 2.42
LINC00565-201ENST00000562710 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.41
LINC00565-201ENST00000562710 RBM19Q9Y4C8 960 aaKnown RBP30.13■■■□□ 2.41
LINC00565-201ENST00000562710 NBPF8Q3BBV2 869 aa30.12■■■□□ 2.41
LINC00565-201ENST00000562710 CDK11AQ9UQ88 783 aaPredicted RBP30.1■■■□□ 2.41
LINC00565-201ENST00000562710 SLC4A1APQ9BWU0 796 aaKnown RBP30.08■■■□□ 2.41
LINC00565-201ENST00000562710 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
LINC00565-201ENST00000562710 CCDC184Q52MB2 194 aa30.07■■■□□ 2.4
LINC00565-201ENST00000562710 POLR1AO95602 1720 aaPredicted RBP30.06■■■□□ 2.4
LINC00565-201ENST00000562710 SPATA31E1Q6ZUB1 1445 aa30.06■■■□□ 2.4
LINC00565-201ENST00000562710 GRIN2AQ12879 1464 aa30.04■■■□□ 2.4
LINC00565-201ENST00000562710 TROQ12816 1431 aaPredicted RBP30■■■□□ 2.39
LINC00565-201ENST00000562710 PZPP20742 1482 aa30■■■□□ 2.39
LINC00565-201ENST00000562710 CAMSAP2Q08AD1 1489 aa29.99■■■□□ 2.39
LINC00565-201ENST00000562710 KIF7Q2M1P5 1343 aa29.99■■■□□ 2.39
LINC00565-201ENST00000562710 IRX6P78412 446 aaPredicted RBP29.98■■■□□ 2.39
LINC00565-201ENST00000562710 ITSN2Q9NZM3 1697 aa29.98■■■□□ 2.39
LINC00565-201ENST00000562710 PRG4Q92954 1404 aaPredicted RBP29.98■■■□□ 2.39
LINC00565-201ENST00000562710 ADGBQ8N7X0 1667 aa29.97■■■□□ 2.39
LINC00565-201ENST00000562710 EIF4G3O43432 1585 aaKnown RBP29.96■■■□□ 2.39
LINC00565-201ENST00000562710 MRS2Q9HD23 443 aa29.96■■■□□ 2.39
LINC00565-201ENST00000562710 ERICH6BQ5W0A0 696 aa29.95■■■□□ 2.39
LINC00565-201ENST00000562710 CFDP1Q9UEE9 299 aaPredicted RBP29.95■■■□□ 2.38
LINC00565-201ENST00000562710 FAM9BQ8IZU0 186 aa29.94■■■□□ 2.38
LINC00565-201ENST00000562710 GPATCH8Q9UKJ3 1502 aaKnown RBP29.92■■■□□ 2.38
LINC00565-201ENST00000562710 ZBED9Q6R2W3 1325 aa29.9■■■□□ 2.38
LINC00565-201ENST00000562710 ADCY10Q96PN6 1610 aa29.9■■■□□ 2.38
LINC00565-201ENST00000562710 ADGRL2O95490 1459 aa29.9■■■□□ 2.38
LINC00565-201ENST00000562710 MBD5Q9P267 1494 aa29.89■■■□□ 2.38
LINC00565-201ENST00000562710 CROCC2H7BZ55 1655 aa29.89■■■□□ 2.38
LINC00565-201ENST00000562710 PLB1Q6P1J6 1458 aa29.88■■■□□ 2.37
LINC00565-201ENST00000562710 KIF14Q15058 1648 aa29.88■■■□□ 2.37
LINC00565-201ENST00000562710 KIAA1107Q9UPP5 1409 aa29.88■■■□□ 2.37
LINC00565-201ENST00000562710 CEP170Q5SW79 1584 aa29.84■■■□□ 2.37
LINC00565-201ENST00000562710 MAGI1Q96QZ7 1491 aaPredicted RBP29.84■■■□□ 2.37
LINC00565-201ENST00000562710 PPP4R2Q9NY27 417 aa29.83■■■□□ 2.37
LINC00565-201ENST00000562710 ZNF777Q9ULD5 760 aaPredicted RBP29.82■■■□□ 2.36
LINC00565-201ENST00000562710 ANKRD30AQ9BXX3 1397 aa29.81■■■□□ 2.36
LINC00565-201ENST00000562710 PKD2Q13563 968 aa29.79■■■□□ 2.36
LINC00565-201ENST00000562710 CHMP7Q8WUX9 453 aaPredicted RBP29.79■■■□□ 2.36
LINC00565-201ENST00000562710 USP47Q96K76 1375 aa29.78■■■□□ 2.36
LINC00565-201ENST00000562710 BCORL1Q5H9F3 1711 aa29.78■■■□□ 2.36
LINC00565-201ENST00000562710 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
LINC00565-201ENST00000562710 DHX29Q7Z478 1369 aaKnown RBP29.77■■■□□ 2.36
LINC00565-201ENST00000562710 CARMIL2Q6F5E8 1435 aa29.75■■■□□ 2.35
LINC00565-201ENST00000562710 ANKRD50Q9ULJ7 1429 aa29.75■■■□□ 2.35
LINC00565-201ENST00000562710 KDM5CP41229 1560 aa29.73■■■□□ 2.35
LINC00565-201ENST00000562710 FANCIQ9NVI1 1328 aa29.72■■■□□ 2.35
LINC00565-201ENST00000562710 ZNF326Q5BKZ1 582 aaKnown RBP29.72■■■□□ 2.35
LINC00565-201ENST00000562710 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
LINC00565-201ENST00000562710 CDC42BPAQ5VT25 1732 aa29.71■■■□□ 2.35
LINC00565-201ENST00000562710 MSH5O43196 834 aa29.69■■■□□ 2.34
LINC00565-201ENST00000562710 JPH4Q96JJ6 628 aa29.69■■■□□ 2.34
LINC00565-201ENST00000562710 UHRF1BP1Q6BDS2 1440 aa29.68■■■□□ 2.34
LINC00565-201ENST00000562710 SHANK2Q9UPX8 1470 aa29.67■■■□□ 2.34
LINC00565-201ENST00000562710 NUP160Q12769 1436 aa29.67■■■□□ 2.34
LINC00565-201ENST00000562710 FBLN2P98095 1184 aa29.66■■■□□ 2.34
LINC00565-201ENST00000562710 ABCC10Q5T3U5 1492 aa29.65■■■□□ 2.34
LINC00565-201ENST00000562710 PLEKHD1A6NEE1 506 aa29.65■■■□□ 2.34
LINC00565-201ENST00000562710 RALGAPBQ86X10 1494 aa29.65■■■□□ 2.34
LINC00565-201ENST00000562710 C9orf84Q5VXU9 1444 aa29.64■■■□□ 2.34
LINC00565-201ENST00000562710 NUP155O75694 1391 aa29.64■■■□□ 2.34
LINC00565-201ENST00000562710 POLR3GLQ9BT43 218 aa29.64■■■□□ 2.34
LINC00565-201ENST00000562710 ABCA8O94911 1581 aa29.63■■■□□ 2.33
LINC00565-201ENST00000562710 SMG6Q86US8 1419 aaKnown RBP29.63■■■□□ 2.33
LINC00565-201ENST00000562710 ERCC6Q03468 1493 aa29.62■■■□□ 2.33
LINC00565-201ENST00000562710 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
LINC00565-201ENST00000562710 B4GALNT3Q6L9W6 998 aa29.61■■■□□ 2.33
LINC00565-201ENST00000562710 KDM5DQ9BY66 1539 aa29.6■■■□□ 2.33
LINC00565-201ENST00000562710 ROCK2O75116 1388 aaKnown RBP29.6■■■□□ 2.33
LINC00565-201ENST00000562710 ATP10BO94823 1461 aa29.59■■■□□ 2.33
LINC00565-201ENST00000562710 CNGB1Q14028 1251 aaPredicted RBP29.57■■■□□ 2.32
LINC00565-201ENST00000562710 CARD11Q9BXL7 1154 aa29.55■■■□□ 2.32
LINC00565-201ENST00000562710 TSPY4P0CV99 314 aa29.55■■■□□ 2.32
LINC00565-201ENST00000562710 TSPY10P0CW01 314 aa29.55■■■□□ 2.32
LINC00565-201ENST00000562710 NUDCQ9Y266 331 aa29.54■■■□□ 2.32
LINC00565-201ENST00000562710 PTPRGP23470 1445 aa29.51■■■□□ 2.32
LINC00565-201ENST00000562710 PNISRQ8TF01 805 aaKnown RBP29.5■■■□□ 2.31
LINC00565-201ENST00000562710 ARHGEF5Q12774 1597 aa29.5■■■□□ 2.31
LINC00565-201ENST00000562710 KIF15Q9NS87 1388 aa29.5■■■□□ 2.31
LINC00565-201ENST00000562710 RNF123Q5XPI4 1314 aa29.48■■■□□ 2.31
LINC00565-201ENST00000562710 TMC1Q8TDI8 760 aa29.46■■■□□ 2.31
LINC00565-201ENST00000562710 KDM2AQ9Y2K7 1162 aa29.46■■■□□ 2.31
LINC00565-201ENST00000562710 ST20-MTHFSA0A0A6YYL1 179 aa29.45■■■□□ 2.31
LINC00565-201ENST00000562710 HNRNPMP52272 730 aaKnown RBP eCLIP29.45■■■□□ 2.31
LINC00565-201ENST00000562710 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
LINC00565-201ENST00000562710 KTN1Q86UP2 1357 aaKnown RBP29.4■■■□□ 2.3
LINC00565-201ENST00000562710 E9PCH4 1651 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms