RNA–Protein interactions for RNA: ENST00000562431.1

LPCAT4-203, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 341 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-203ENST00000562431 LMTK3Q96Q04 1460 aa18.41■□□□□ 0.54
LPCAT4-203ENST00000562431 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
LPCAT4-203ENST00000562431 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
LPCAT4-203ENST00000562431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.54
LPCAT4-203ENST00000562431 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.53
LPCAT4-203ENST00000562431 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
LPCAT4-203ENST00000562431 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
LPCAT4-203ENST00000562431 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
LPCAT4-203ENST00000562431 TTC37Q6PGP7 1564 aa18.37■□□□□ 0.53
LPCAT4-203ENST00000562431 RIMS1Q86UR5 1692 aaKnown RBP18.36■□□□□ 0.53
LPCAT4-203ENST00000562431 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
LPCAT4-203ENST00000562431 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
LPCAT4-203ENST00000562431 CFAP74Q9C0B2 1584 aa18.31■□□□□ 0.52
LPCAT4-203ENST00000562431 SUPT6HQ7KZ85 1726 aaKnown RBP18.31■□□□□ 0.52
LPCAT4-203ENST00000562431 DENND4BO75064 1496 aaPredicted RBP18.31■□□□□ 0.52
LPCAT4-203ENST00000562431 NCOA2Q15596 1464 aa18.3■□□□□ 0.52
LPCAT4-203ENST00000562431 PLCH2O75038 1416 aa18.3■□□□□ 0.52
LPCAT4-203ENST00000562431 FANCAO15360 1455 aa18.29■□□□□ 0.52
LPCAT4-203ENST00000562431 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
LPCAT4-203ENST00000562431 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
LPCAT4-203ENST00000562431 ARHGAP5Q13017 1502 aa18.28■□□□□ 0.52
LPCAT4-203ENST00000562431 EFCAB2Q5VUJ9 269 aa18.27■□□□□ 0.52
LPCAT4-203ENST00000562431 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
LPCAT4-203ENST00000562431 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
LPCAT4-203ENST00000562431 ZFYVE16Q7Z3T8 1539 aa18.25■□□□□ 0.51
LPCAT4-203ENST00000562431 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
LPCAT4-203ENST00000562431 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
LPCAT4-203ENST00000562431 CFDP1Q9UEE9 299 aaPredicted RBP18.24■□□□□ 0.51
LPCAT4-203ENST00000562431 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
LPCAT4-203ENST00000562431 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
LPCAT4-203ENST00000562431 CDC42BPAQ5VT25 1732 aa18.23■□□□□ 0.51
LPCAT4-203ENST00000562431 FER1L4A9Z1Z3 1794 aa18.22■□□□□ 0.51
LPCAT4-203ENST00000562431 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
LPCAT4-203ENST00000562431 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
LPCAT4-203ENST00000562431 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
LPCAT4-203ENST00000562431 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
LPCAT4-203ENST00000562431 MYOM3Q5VTT5 1437 aa18.18■□□□□ 0.5
LPCAT4-203ENST00000562431 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
LPCAT4-203ENST00000562431 HSPA2P54652 639 aa18.17■□□□□ 0.5
LPCAT4-203ENST00000562431 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
LPCAT4-203ENST00000562431 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
LPCAT4-203ENST00000562431 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
LPCAT4-203ENST00000562431 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
LPCAT4-203ENST00000562431 PLEKHH2Q8IVE3 1493 aa18.13■□□□□ 0.49
LPCAT4-203ENST00000562431 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
LPCAT4-203ENST00000562431 ABCC1P33527 1531 aa18.12■□□□□ 0.49
LPCAT4-203ENST00000562431 FGD6Q6ZV73 1430 aa18.11■□□□□ 0.49
LPCAT4-203ENST00000562431 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
LPCAT4-203ENST00000562431 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
LPCAT4-203ENST00000562431 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
LPCAT4-203ENST00000562431 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
LPCAT4-203ENST00000562431 KDM5CP41229 1560 aa18.09■□□□□ 0.49
LPCAT4-203ENST00000562431 ATP10AO60312 1499 aa18.09■□□□□ 0.49
LPCAT4-203ENST00000562431 KIAA1107Q9UPP5 1409 aa18.09■□□□□ 0.49
LPCAT4-203ENST00000562431 STRCQ7RTU9 1775 aa18.08■□□□□ 0.48
LPCAT4-203ENST00000562431 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
LPCAT4-203ENST00000562431 TRAPPC8Q9Y2L5 1435 aa18.06■□□□□ 0.48
LPCAT4-203ENST00000562431 AFAP1Q8N556 730 aa18.06■□□□□ 0.48
LPCAT4-203ENST00000562431 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
LPCAT4-203ENST00000562431 PTPN23Q9H3S7 1636 aa18.05■□□□□ 0.48
LPCAT4-203ENST00000562431 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
LPCAT4-203ENST00000562431 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
LPCAT4-203ENST00000562431 CERKQ8TCT0 537 aa18.05■□□□□ 0.48
LPCAT4-203ENST00000562431 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
LPCAT4-203ENST00000562431 MLECQ14165 292 aa18.04■□□□□ 0.48
LPCAT4-203ENST00000562431 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
LPCAT4-203ENST00000562431 TCOF1Q13428 1488 aaKnown RBP18.02■□□□□ 0.48
LPCAT4-203ENST00000562431 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
LPCAT4-203ENST00000562431 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
LPCAT4-203ENST00000562431 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
LPCAT4-203ENST00000562431 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
LPCAT4-203ENST00000562431 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
LPCAT4-203ENST00000562431 ARHGEF5Q12774 1597 aa17.99■□□□□ 0.47
LPCAT4-203ENST00000562431 C3P01024 1663 aa17.99■□□□□ 0.47
LPCAT4-203ENST00000562431 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
LPCAT4-203ENST00000562431 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
LPCAT4-203ENST00000562431 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
LPCAT4-203ENST00000562431 CEBPAP49715 358 aaPredicted RBP17.98■□□□□ 0.47
LPCAT4-203ENST00000562431 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
LPCAT4-203ENST00000562431 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
LPCAT4-203ENST00000562431 AGLP35573 1532 aa17.95■□□□□ 0.46
LPCAT4-203ENST00000562431 ABCC5O15440 1437 aa17.94■□□□□ 0.46
LPCAT4-203ENST00000562431 DAPK1P53355 1430 aa17.94■□□□□ 0.46
LPCAT4-203ENST00000562431 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
LPCAT4-203ENST00000562431 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
LPCAT4-203ENST00000562431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.92■□□□□ 0.46
LPCAT4-203ENST00000562431 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
LPCAT4-203ENST00000562431 DNMT1P26358 1616 aaKnown RBP17.92■□□□□ 0.46
LPCAT4-203ENST00000562431 ITGAEP38570 1179 aa17.92■□□□□ 0.46
LPCAT4-203ENST00000562431 RTEL1-TNFRSF6BF6WH68 1400 aa17.91■□□□□ 0.46
LPCAT4-203ENST00000562431 INO80Q9ULG1 1556 aaPredicted RBP17.91■□□□□ 0.46
LPCAT4-203ENST00000562431 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
LPCAT4-203ENST00000562431 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
LPCAT4-203ENST00000562431 PTPRTO14522 1441 aa17.89■□□□□ 0.46
LPCAT4-203ENST00000562431 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
LPCAT4-203ENST00000562431 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
LPCAT4-203ENST00000562431 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
LPCAT4-203ENST00000562431 NCOA1Q15788 1441 aa17.85■□□□□ 0.45
LPCAT4-203ENST00000562431 ILDR2Q71H61 639 aa17.85■□□□□ 0.45
LPCAT4-203ENST00000562431 ANKRD30AQ9BXX3 1397 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms