RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 NEO1Q92859 1461 aa18.57■□□□□ 0.56
FANCA-209ENST00000562424 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
FANCA-209ENST00000562424 CCDC18Q5T9S5 1454 aa18.56■□□□□ 0.56
FANCA-209ENST00000562424 CEP162Q5TB80 1403 aa18.55■□□□□ 0.56
FANCA-209ENST00000562424 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
FANCA-209ENST00000562424 TROQ12816 1431 aaPredicted RBP18.54■□□□□ 0.56
FANCA-209ENST00000562424 CFAP74Q9C0B2 1584 aa18.52■□□□□ 0.56
FANCA-209ENST00000562424 KIF14Q15058 1648 aa18.52■□□□□ 0.55
FANCA-209ENST00000562424 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
FANCA-209ENST00000562424 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
FANCA-209ENST00000562424 FANCAO15360 1455 aa18.5■□□□□ 0.55
FANCA-209ENST00000562424 HECW2Q9P2P5 1572 aa18.48■□□□□ 0.55
FANCA-209ENST00000562424 PLCH2O75038 1416 aa18.48■□□□□ 0.55
FANCA-209ENST00000562424 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
FANCA-209ENST00000562424 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
FANCA-209ENST00000562424 RICTORQ6R327 1708 aa18.44■□□□□ 0.54
FANCA-209ENST00000562424 RAPGEF3O95398 923 aa18.43■□□□□ 0.54
FANCA-209ENST00000562424 DENND4BO75064 1496 aaPredicted RBP18.42■□□□□ 0.54
FANCA-209ENST00000562424 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
FANCA-209ENST00000562424 PREX2Q70Z35 1606 aa18.39■□□□□ 0.53
FANCA-209ENST00000562424 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.53
FANCA-209ENST00000562424 ARHGAP5Q13017 1502 aa18.39■□□□□ 0.53
FANCA-209ENST00000562424 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
FANCA-209ENST00000562424 ZMYM4Q5VZL5 1548 aa18.36■□□□□ 0.53
FANCA-209ENST00000562424 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
FANCA-209ENST00000562424 POGZQ7Z3K3 1410 aa18.34■□□□□ 0.53
FANCA-209ENST00000562424 VPS8Q8N3P4 1428 aa18.34■□□□□ 0.53
FANCA-209ENST00000562424 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.53
FANCA-209ENST00000562424 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.53
FANCA-209ENST00000562424 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
FANCA-209ENST00000562424 MAGI2Q86UL8 1455 aa18.31■□□□□ 0.52
FANCA-209ENST00000562424 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
FANCA-209ENST00000562424 TIAM1Q13009 1591 aa18.29■□□□□ 0.52
FANCA-209ENST00000562424 ABCC1P33527 1531 aa18.28■□□□□ 0.52
FANCA-209ENST00000562424 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
FANCA-209ENST00000562424 ZNF518AQ6AHZ1 1483 aa18.28■□□□□ 0.52
FANCA-209ENST00000562424 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
FANCA-209ENST00000562424 PTPRMP28827 1452 aa18.27■□□□□ 0.52
FANCA-209ENST00000562424 KDM5CP41229 1560 aa18.27■□□□□ 0.52
FANCA-209ENST00000562424 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
FANCA-209ENST00000562424 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
FANCA-209ENST00000562424 FBXO41Q8TF61 875 aa18.25■□□□□ 0.51
FANCA-209ENST00000562424 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
FANCA-209ENST00000562424 SAMD9LQ8IVG5 1584 aa18.25■□□□□ 0.51
FANCA-209ENST00000562424 ARHGEF12Q9NZN5 1544 aa18.24■□□□□ 0.51
FANCA-209ENST00000562424 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
FANCA-209ENST00000562424 SUPT6HQ7KZ85 1726 aaKnown RBP18.23■□□□□ 0.51
FANCA-209ENST00000562424 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
FANCA-209ENST00000562424 MAP3K1Q13233 1512 aa18.23■□□□□ 0.51
FANCA-209ENST00000562424 SIGLEC1Q9BZZ2 1709 aa18.22■□□□□ 0.51
FANCA-209ENST00000562424 TRAPPC8Q9Y2L5 1435 aa18.22■□□□□ 0.51
FANCA-209ENST00000562424 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
FANCA-209ENST00000562424 CFDP1Q9UEE9 299 aaPredicted RBP18.21■□□□□ 0.51
FANCA-209ENST00000562424 ZNF777Q9ULD5 760 aaPredicted RBP18.2■□□□□ 0.5
FANCA-209ENST00000562424 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
FANCA-209ENST00000562424 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
FANCA-209ENST00000562424 ATP10AO60312 1499 aa18.19■□□□□ 0.5
FANCA-209ENST00000562424 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
FANCA-209ENST00000562424 PLEKHH2Q8IVE3 1493 aa18.19■□□□□ 0.5
FANCA-209ENST00000562424 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
FANCA-209ENST00000562424 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
FANCA-209ENST00000562424 C9orf84Q5VXU9 1444 aa18.17■□□□□ 0.5
FANCA-209ENST00000562424 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
FANCA-209ENST00000562424 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
FANCA-209ENST00000562424 ABCA6Q8N139 1617 aa18.16■□□□□ 0.5
FANCA-209ENST00000562424 MADDQ8WXG6 1647 aa18.16■□□□□ 0.5
FANCA-209ENST00000562424 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
FANCA-209ENST00000562424 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
FANCA-209ENST00000562424 HNRNPMP52272 730 aaKnown RBP eCLIP18.13■□□□□ 0.49
FANCA-209ENST00000562424 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
FANCA-209ENST00000562424 LMTK3Q96Q04 1460 aa18.12■□□□□ 0.49
FANCA-209ENST00000562424 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
FANCA-209ENST00000562424 RIMS1Q86UR5 1692 aaKnown RBP18.11■□□□□ 0.49
FANCA-209ENST00000562424 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
FANCA-209ENST00000562424 INO80Q9ULG1 1556 aaPredicted RBP18.09■□□□□ 0.49
FANCA-209ENST00000562424 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
FANCA-209ENST00000562424 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
FANCA-209ENST00000562424 ATP7AQ04656 1500 aa18.08■□□□□ 0.49
FANCA-209ENST00000562424 APLP2Q06481 763 aa18.08■□□□□ 0.48
FANCA-209ENST00000562424 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
FANCA-209ENST00000562424 AGLP35573 1532 aa18.07■□□□□ 0.48
FANCA-209ENST00000562424 MLECQ14165 292 aa18.06■□□□□ 0.48
FANCA-209ENST00000562424 HSPA2P54652 639 aa18.05■□□□□ 0.48
FANCA-209ENST00000562424 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
FANCA-209ENST00000562424 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
FANCA-209ENST00000562424 ARHGEF5Q12774 1597 aa18.03■□□□□ 0.48
FANCA-209ENST00000562424 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
FANCA-209ENST00000562424 MIA2Q96PC5 1412 aa18.02■□□□□ 0.48
FANCA-209ENST00000562424 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.47
FANCA-209ENST00000562424 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
FANCA-209ENST00000562424 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
FANCA-209ENST00000562424 PLXNC1O60486 1568 aa18■□□□□ 0.47
FANCA-209ENST00000562424 A2MP01023 1474 aa17.99■□□□□ 0.47
FANCA-209ENST00000562424 ZBTB22O15209 634 aa17.95■□□□□ 0.46
FANCA-209ENST00000562424 CERKQ8TCT0 537 aa17.94■□□□□ 0.46
FANCA-209ENST00000562424 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
FANCA-209ENST00000562424 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
FANCA-209ENST00000562424 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
FANCA-209ENST00000562424 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
FANCA-209ENST00000562424 C3P01024 1663 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms