RNA–Protein interactions for RNA: ENST00000561722.5

FANCA-208, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-208ENST00000561722 PLCH2O75038 1416 aa19.34■□□□□ 0.69
FANCA-208ENST00000561722 CDC42BPAQ5VT25 1732 aa19.34■□□□□ 0.69
FANCA-208ENST00000561722 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.69
FANCA-208ENST00000561722 NCOA2Q15596 1464 aa19.33■□□□□ 0.68
FANCA-208ENST00000561722 PREX2Q70Z35 1606 aa19.33■□□□□ 0.68
FANCA-208ENST00000561722 CDC42BPBQ9Y5S2 1711 aa19.32■□□□□ 0.68
FANCA-208ENST00000561722 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
FANCA-208ENST00000561722 COL17A1Q9UMD9 1497 aaPredicted RBP19.31■□□□□ 0.68
FANCA-208ENST00000561722 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
FANCA-208ENST00000561722 NEO1Q92859 1461 aa19.3■□□□□ 0.68
FANCA-208ENST00000561722 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
FANCA-208ENST00000561722 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
FANCA-208ENST00000561722 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
FANCA-208ENST00000561722 EFCAB2Q5VUJ9 269 aa19.29■□□□□ 0.68
FANCA-208ENST00000561722 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
FANCA-208ENST00000561722 CFDP1Q9UEE9 299 aaPredicted RBP19.26■□□□□ 0.67
FANCA-208ENST00000561722 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
FANCA-208ENST00000561722 ITSN2Q9NZM3 1697 aa19.26■□□□□ 0.67
FANCA-208ENST00000561722 RAPGEF3O95398 923 aa19.25■□□□□ 0.67
FANCA-208ENST00000561722 SCAPERQ9BY12 1400 aa19.23■□□□□ 0.67
FANCA-208ENST00000561722 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
FANCA-208ENST00000561722 SAMD9LQ8IVG5 1584 aa19.22■□□□□ 0.67
FANCA-208ENST00000561722 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
FANCA-208ENST00000561722 KDM4FA0A1W2PPD8 638 aa19.21■□□□□ 0.67
FANCA-208ENST00000561722 FRMPD1Q5SYB0 1578 aa19.2■□□□□ 0.66
FANCA-208ENST00000561722 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
FANCA-208ENST00000561722 ABCC1P33527 1531 aa19.19■□□□□ 0.66
FANCA-208ENST00000561722 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
FANCA-208ENST00000561722 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
FANCA-208ENST00000561722 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
FANCA-208ENST00000561722 ARHGEF12Q9NZN5 1544 aa19.16■□□□□ 0.66
FANCA-208ENST00000561722 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.66
FANCA-208ENST00000561722 POGZQ7Z3K3 1410 aa19.16■□□□□ 0.66
FANCA-208ENST00000561722 MYT1LQ9UL68 1186 aa19.15■□□□□ 0.66
FANCA-208ENST00000561722 AFAP1Q8N556 730 aa19.14■□□□□ 0.65
FANCA-208ENST00000561722 TRAPPC8Q9Y2L5 1435 aa19.14■□□□□ 0.65
FANCA-208ENST00000561722 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.65
FANCA-208ENST00000561722 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
FANCA-208ENST00000561722 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
FANCA-208ENST00000561722 PTPN23Q9H3S7 1636 aa19.09■□□□□ 0.65
FANCA-208ENST00000561722 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.65
FANCA-208ENST00000561722 MIA2Q96PC5 1412 aa19.08■□□□□ 0.64
FANCA-208ENST00000561722 ZMYM4Q5VZL5 1548 aa19.07■□□□□ 0.64
FANCA-208ENST00000561722 YEATS2Q9ULM3 1422 aa19.07■□□□□ 0.64
FANCA-208ENST00000561722 KIAA1107Q9UPP5 1409 aa19.07■□□□□ 0.64
FANCA-208ENST00000561722 ZFYVE16Q7Z3T8 1539 aa19.06■□□□□ 0.64
FANCA-208ENST00000561722 KDM5CP41229 1560 aa19.06■□□□□ 0.64
FANCA-208ENST00000561722 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
FANCA-208ENST00000561722 HECW2Q9P2P5 1572 aa19.05■□□□□ 0.64
FANCA-208ENST00000561722 ARHGEF40Q8TER5 1519 aa19.05■□□□□ 0.64
FANCA-208ENST00000561722 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
FANCA-208ENST00000561722 SPAG9O60271 1321 aaKnown RBP19.02■□□□□ 0.64
FANCA-208ENST00000561722 CCDC141Q6ZP82 1450 aa19.02■□□□□ 0.63
FANCA-208ENST00000561722 MAGI2Q86UL8 1455 aa19■□□□□ 0.63
FANCA-208ENST00000561722 KIDINS220Q9ULH0 1771 aa19■□□□□ 0.63
FANCA-208ENST00000561722 ABCA6Q8N139 1617 aa19■□□□□ 0.63
FANCA-208ENST00000561722 ARHGEF5Q12774 1597 aa18.99■□□□□ 0.63
FANCA-208ENST00000561722 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
FANCA-208ENST00000561722 ATP7AQ04656 1500 aa18.99■□□□□ 0.63
FANCA-208ENST00000561722 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
FANCA-208ENST00000561722 MLH3Q9UHC1 1453 aa18.98■□□□□ 0.63
FANCA-208ENST00000561722 INO80Q9ULG1 1556 aaPredicted RBP18.98■□□□□ 0.63
FANCA-208ENST00000561722 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
FANCA-208ENST00000561722 ILDR1Q86SU0 546 aaPredicted RBP18.96■□□□□ 0.63
FANCA-208ENST00000561722 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
FANCA-208ENST00000561722 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
FANCA-208ENST00000561722 ATP10AO60312 1499 aa18.95■□□□□ 0.62
FANCA-208ENST00000561722 SIGLEC1Q9BZZ2 1709 aa18.94■□□□□ 0.62
FANCA-208ENST00000561722 DAPK1P53355 1430 aa18.94■□□□□ 0.62
FANCA-208ENST00000561722 DNMT1P26358 1616 aaKnown RBP18.94■□□□□ 0.62
FANCA-208ENST00000561722 ITGAEP38570 1179 aa18.94■□□□□ 0.62
FANCA-208ENST00000561722 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
FANCA-208ENST00000561722 ABCC5O15440 1437 aa18.93■□□□□ 0.62
FANCA-208ENST00000561722 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
FANCA-208ENST00000561722 CROCC2H7BZ55 1655 aa18.93■□□□□ 0.62
FANCA-208ENST00000561722 CHIC2Q9UKJ5 165 aa18.93■□□□□ 0.62
FANCA-208ENST00000561722 MLECQ14165 292 aa18.92■□□□□ 0.62
FANCA-208ENST00000561722 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
FANCA-208ENST00000561722 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
FANCA-208ENST00000561722 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
FANCA-208ENST00000561722 MAST1Q9Y2H9 1570 aa18.89■□□□□ 0.61
FANCA-208ENST00000561722 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
FANCA-208ENST00000561722 A2MP01023 1474 aa18.87■□□□□ 0.61
FANCA-208ENST00000561722 SHANK2Q9UPX8 1470 aa18.86■□□□□ 0.61
FANCA-208ENST00000561722 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
FANCA-208ENST00000561722 BCORL1Q5H9F3 1711 aa18.84■□□□□ 0.61
FANCA-208ENST00000561722 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
FANCA-208ENST00000561722 PTPRKQ15262 1439 aa18.83■□□□□ 0.61
FANCA-208ENST00000561722 PLXNC1O60486 1568 aa18.82■□□□□ 0.6
FANCA-208ENST00000561722 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
FANCA-208ENST00000561722 DHX29Q7Z478 1369 aaKnown RBP18.8■□□□□ 0.6
FANCA-208ENST00000561722 ANKRD30AQ9BXX3 1397 aa18.8■□□□□ 0.6
FANCA-208ENST00000561722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.8■□□□□ 0.6
FANCA-208ENST00000561722 MADDQ8WXG6 1647 aa18.79■□□□□ 0.6
FANCA-208ENST00000561722 AGLP35573 1532 aa18.79■□□□□ 0.6
FANCA-208ENST00000561722 KIF3BO15066 747 aa18.78■□□□□ 0.6
FANCA-208ENST00000561722 GGT6Q6P531 493 aa18.78■□□□□ 0.6
FANCA-208ENST00000561722 ADAMTSL3P82987 1691 aa18.78■□□□□ 0.6
FANCA-208ENST00000561722 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.6
FANCA-208ENST00000561722 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms