RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 PREX2Q70Z35 1606 aa33.59■■■□□ 2.97
SNX22-205ENST00000560945 CDC42BPBQ9Y5S2 1711 aa33.58■■■□□ 2.97
SNX22-205ENST00000560945 MYO5CQ9NQX4 1742 aa33.51■■■□□ 2.96
SNX22-205ENST00000560945 ARHGAP5Q13017 1502 aa33.5■■■□□ 2.95
SNX22-205ENST00000560945 ABCC5O15440 1437 aa33.49■■■□□ 2.95
SNX22-205ENST00000560945 DAPK1P53355 1430 aa33.49■■■□□ 2.95
SNX22-205ENST00000560945 CHIC2Q9UKJ5 165 aa33.49■■■□□ 2.95
SNX22-205ENST00000560945 DNMT1P26358 1616 aaKnown RBP33.48■■■□□ 2.95
SNX22-205ENST00000560945 SAMD9LQ8IVG5 1584 aa33.48■■■□□ 2.95
SNX22-205ENST00000560945 PLCH2O75038 1416 aa33.47■■■□□ 2.95
SNX22-205ENST00000560945 ABCA9Q8IUA7 1624 aa33.45■■■□□ 2.95
SNX22-205ENST00000560945 MAPKBP1O60336 1514 aa33.44■■■□□ 2.94
SNX22-205ENST00000560945 SETD5Q9C0A6 1442 aa33.43■■■□□ 2.94
SNX22-205ENST00000560945 RAB3GAP2Q9H2M9 1393 aa33.43■■■□□ 2.94
SNX22-205ENST00000560945 HNRNPMP52272 730 aaKnown RBP eCLIP33.4■■■□□ 2.94
SNX22-205ENST00000560945 CCER1Q8TC90 406 aaPredicted RBP33.39■■■□□ 2.94
SNX22-205ENST00000560945 HRCP23327 699 aa33.38■■■□□ 2.93
SNX22-205ENST00000560945 RRP7BPQ9NSQ0 103 aa33.37■■■□□ 2.93
SNX22-205ENST00000560945 MBD5Q9P267 1494 aa33.37■■■□□ 2.93
SNX22-205ENST00000560945 HFM1A2PYH4 1435 aa33.35■■■□□ 2.93
SNX22-205ENST00000560945 NAIPQ13075 1403 aa33.34■■■□□ 2.93
SNX22-205ENST00000560945 SYCP2Q9BX26 1530 aa33.34■■■□□ 2.93
SNX22-205ENST00000560945 EFCAB2Q5VUJ9 269 aa33.33■■■□□ 2.93
SNX22-205ENST00000560945 CROCC2H7BZ55 1655 aa33.33■■■□□ 2.93
SNX22-205ENST00000560945 AKNAQ7Z591 1439 aa33.32■■■□□ 2.93
SNX22-205ENST00000560945 ARAP3Q8WWN8 1544 aa33.31■■■□□ 2.92
SNX22-205ENST00000560945 ARHGEF12Q9NZN5 1544 aa33.31■■■□□ 2.92
SNX22-205ENST00000560945 ARHGEF5Q12774 1597 aa33.29■■■□□ 2.92
SNX22-205ENST00000560945 FANCAO15360 1455 aa33.26■■■□□ 2.92
SNX22-205ENST00000560945 CD109Q6YHK3 1445 aa33.25■■■□□ 2.91
SNX22-205ENST00000560945 ABCC1P33527 1531 aa33.25■■■□□ 2.91
SNX22-205ENST00000560945 ROCK1Q13464 1354 aa33.25■■■□□ 2.91
SNX22-205ENST00000560945 CCDC141Q6ZP82 1450 aa33.24■■■□□ 2.91
SNX22-205ENST00000560945 KIAA1107Q9UPP5 1409 aa33.24■■■□□ 2.91
SNX22-205ENST00000560945 DHX57Q6P158 1386 aaKnown RBP33.23■■■□□ 2.91
SNX22-205ENST00000560945 PLEKHH2Q8IVE3 1493 aa33.23■■■□□ 2.91
SNX22-205ENST00000560945 GCC2Q8IWJ2 1684 aa33.23■■■□□ 2.91
SNX22-205ENST00000560945 KDM6BO15054 1643 aa33.22■■■□□ 2.91
SNX22-205ENST00000560945 C9orf84Q5VXU9 1444 aa33.22■■■□□ 2.91
SNX22-205ENST00000560945 SHANK2Q9UPX8 1470 aa33.21■■■□□ 2.91
SNX22-205ENST00000560945 ADGRL2O95490 1459 aa33.2■■■□□ 2.91
SNX22-205ENST00000560945 DIP2BQ9P265 1576 aa33.2■■■□□ 2.91
SNX22-205ENST00000560945 ADGBQ8N7X0 1667 aa33.19■■■□□ 2.9
SNX22-205ENST00000560945 NCOA1Q15788 1441 aa33.19■■■□□ 2.9
SNX22-205ENST00000560945 TRAPPC8Q9Y2L5 1435 aa33.18■■■□□ 2.9
SNX22-205ENST00000560945 KIF13AQ9H1H9 1805 aa33.18■■■□□ 2.9
SNX22-205ENST00000560945 TSPY4P0CV99 314 aa33.16■■■□□ 2.9
SNX22-205ENST00000560945 TSPY10P0CW01 314 aa33.16■■■□□ 2.9
SNX22-205ENST00000560945 GLI2P10070 1586 aa33.15■■■□□ 2.9
SNX22-205ENST00000560945 FAM69CQ0P6D2 419 aa33.14■■■□□ 2.9
SNX22-205ENST00000560945 RSPH4AQ5TD94 716 aa33.14■■■□□ 2.9
SNX22-205ENST00000560945 MAP3K4Q9Y6R4 1608 aa33.14■■■□□ 2.9
SNX22-205ENST00000560945 ANKRD30AQ9BXX3 1397 aa33.13■■■□□ 2.89
SNX22-205ENST00000560945 ADGRL1O94910 1474 aa33.12■■■□□ 2.89
SNX22-205ENST00000560945 SCAPERQ9BY12 1400 aa33.09■■■□□ 2.89
SNX22-205ENST00000560945 AFAP1Q8N556 730 aa33.08■■■□□ 2.89
SNX22-205ENST00000560945 MAST1Q9Y2H9 1570 aa33.08■■■□□ 2.89
SNX22-205ENST00000560945 TSPOAP1O95153 1857 aa33.08■■■□□ 2.89
SNX22-205ENST00000560945 KIF15Q9NS87 1388 aa33.03■■■□□ 2.88
SNX22-205ENST00000560945 CFAP74Q9C0B2 1584 aa33.02■■■□□ 2.88
SNX22-205ENST00000560945 ZEB1P37275 1124 aaPredicted RBP33■■■□□ 2.87
SNX22-205ENST00000560945 TRHP20396 242 aaPredicted RBP32.99■■■□□ 2.87
SNX22-205ENST00000560945 ANKRD50Q9ULJ7 1429 aa32.97■■■□□ 2.87
SNX22-205ENST00000560945 NEO1Q92859 1461 aa32.97■■■□□ 2.87
SNX22-205ENST00000560945 SPAG9O60271 1321 aaKnown RBP32.96■■■□□ 2.87
SNX22-205ENST00000560945 TRIM52Q96A61 297 aa32.95■■■□□ 2.87
SNX22-205ENST00000560945 PLXNC1O60486 1568 aa32.94■■■□□ 2.86
SNX22-205ENST00000560945 ZFYVE16Q7Z3T8 1539 aa32.94■■■□□ 2.86
SNX22-205ENST00000560945 PPRC1Q5VV67 1664 aaKnown RBP32.93■■■□□ 2.86
SNX22-205ENST00000560945 POGZQ7Z3K3 1410 aa32.9■■■□□ 2.86
SNX22-205ENST00000560945 INO80Q9ULG1 1556 aaPredicted RBP32.89■■■□□ 2.86
SNX22-205ENST00000560945 RTEL1-TNFRSF6BF6WH68 1400 aa32.89■■■□□ 2.86
SNX22-205ENST00000560945 ZNF518AQ6AHZ1 1483 aa32.88■■■□□ 2.85
SNX22-205ENST00000560945 ATP7AQ04656 1500 aa32.87■■■□□ 2.85
SNX22-205ENST00000560945 DENND4BO75064 1496 aaPredicted RBP32.87■■■□□ 2.85
SNX22-205ENST00000560945 CLSPNQ9HAW4 1339 aa32.86■■■□□ 2.85
SNX22-205ENST00000560945 RAPGEF3O95398 923 aa32.84■■■□□ 2.85
SNX22-205ENST00000560945 KDM5CP41229 1560 aa32.83■■■□□ 2.85
SNX22-205ENST00000560945 MYT1LQ9UL68 1186 aa32.82■■■□□ 2.84
SNX22-205ENST00000560945 DUOX2Q9NRD8 1548 aa32.82■■■□□ 2.84
SNX22-205ENST00000560945 TEX14Q8IWB6 1497 aa32.82■■■□□ 2.84
SNX22-205ENST00000560945 MPHOSPH9Q99550 1183 aa32.8■■■□□ 2.84
SNX22-205ENST00000560945 KIDINS220Q9ULH0 1771 aa32.79■■■□□ 2.84
SNX22-205ENST00000560945 PZPP20742 1482 aa32.79■■■□□ 2.84
SNX22-205ENST00000560945 RICTORQ6R327 1708 aa32.75■■■□□ 2.83
SNX22-205ENST00000560945 SIN3AQ96ST3 1273 aa32.74■■■□□ 2.83
SNX22-205ENST00000560945 FRMPD1Q5SYB0 1578 aa32.74■■■□□ 2.83
SNX22-205ENST00000560945 ERBINQ96RT1 1412 aa32.74■■■□□ 2.83
SNX22-205ENST00000560945 FOXD1Q16676 465 aa32.73■■■□□ 2.83
SNX22-205ENST00000560945 HECW2Q9P2P5 1572 aa32.73■■■□□ 2.83
SNX22-205ENST00000560945 MLH3Q9UHC1 1453 aa32.73■■■□□ 2.83
SNX22-205ENST00000560945 NUP155O75694 1391 aa32.71■■■□□ 2.83
SNX22-205ENST00000560945 SLC4A1APQ9BWU0 796 aaKnown RBP32.71■■■□□ 2.83
SNX22-205ENST00000560945 ACIN1Q9UKV3 1341 aaKnown RBP32.7■■■□□ 2.83
SNX22-205ENST00000560945 KDM5DQ9BY66 1539 aa32.67■■■□□ 2.82
SNX22-205ENST00000560945 UNC13BO14795 1591 aa32.67■■■□□ 2.82
SNX22-205ENST00000560945 ABCA6Q8N139 1617 aa32.66■■■□□ 2.82
SNX22-205ENST00000560945 NEUROD1Q13562 356 aa32.65■■■□□ 2.82
SNX22-205ENST00000560945 DHX29Q7Z478 1369 aaKnown RBP32.65■■■□□ 2.82
SNX22-205ENST00000560945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms