RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
RABGGTA-218ENST00000560777 CDC42BPBQ9Y5S2 1711 aa18.7■□□□□ 0.58
RABGGTA-218ENST00000560777 ARHGAP5Q13017 1502 aa18.69■□□□□ 0.58
RABGGTA-218ENST00000560777 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
RABGGTA-218ENST00000560777 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
RABGGTA-218ENST00000560777 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-218ENST00000560777 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
RABGGTA-218ENST00000560777 SUPT6HQ7KZ85 1726 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-218ENST00000560777 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
RABGGTA-218ENST00000560777 ZNF777Q9ULD5 760 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-218ENST00000560777 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
RABGGTA-218ENST00000560777 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
RABGGTA-218ENST00000560777 DENND4BO75064 1496 aaPredicted RBP18.65■□□□□ 0.58
RABGGTA-218ENST00000560777 ZNF644Q9H582 1327 aaPredicted RBP18.61■□□□□ 0.57
RABGGTA-218ENST00000560777 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
RABGGTA-218ENST00000560777 ARHGEF12Q9NZN5 1544 aa18.59■□□□□ 0.57
RABGGTA-218ENST00000560777 HNRNPMP52272 730 aaKnown RBP eCLIP18.59■□□□□ 0.57
RABGGTA-218ENST00000560777 FRMPD1Q5SYB0 1578 aa18.59■□□□□ 0.57
RABGGTA-218ENST00000560777 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
RABGGTA-218ENST00000560777 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
RABGGTA-218ENST00000560777 RICTORQ6R327 1708 aa18.57■□□□□ 0.56
RABGGTA-218ENST00000560777 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-218ENST00000560777 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
RABGGTA-218ENST00000560777 ABCC1P33527 1531 aa18.56■□□□□ 0.56
RABGGTA-218ENST00000560777 MYOM3Q5VTT5 1437 aa18.56■□□□□ 0.56
RABGGTA-218ENST00000560777 KIAA1107Q9UPP5 1409 aa18.56■□□□□ 0.56
RABGGTA-218ENST00000560777 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
RABGGTA-218ENST00000560777 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
RABGGTA-218ENST00000560777 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
RABGGTA-218ENST00000560777 MIA2Q96PC5 1412 aa18.52■□□□□ 0.56
RABGGTA-218ENST00000560777 SYCP2Q9BX26 1530 aa18.52■□□□□ 0.56
RABGGTA-218ENST00000560777 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
RABGGTA-218ENST00000560777 MBD5Q9P267 1494 aa18.51■□□□□ 0.55
RABGGTA-218ENST00000560777 CAMSAP2Q08AD1 1489 aa18.5■□□□□ 0.55
RABGGTA-218ENST00000560777 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
RABGGTA-218ENST00000560777 KDM5CP41229 1560 aa18.49■□□□□ 0.55
RABGGTA-218ENST00000560777 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
RABGGTA-218ENST00000560777 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
RABGGTA-218ENST00000560777 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
RABGGTA-218ENST00000560777 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.55
RABGGTA-218ENST00000560777 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
RABGGTA-218ENST00000560777 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-218ENST00000560777 ZFYVE16Q7Z3T8 1539 aa18.45■□□□□ 0.54
RABGGTA-218ENST00000560777 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
RABGGTA-218ENST00000560777 ATP10AO60312 1499 aa18.42■□□□□ 0.54
RABGGTA-218ENST00000560777 ARHGEF40Q8TER5 1519 aa18.42■□□□□ 0.54
RABGGTA-218ENST00000560777 HECW2Q9P2P5 1572 aa18.42■□□□□ 0.54
RABGGTA-218ENST00000560777 TCOF1Q13428 1488 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-218ENST00000560777 CCDC141Q6ZP82 1450 aa18.4■□□□□ 0.54
RABGGTA-218ENST00000560777 KIDINS220Q9ULH0 1771 aa18.4■□□□□ 0.54
RABGGTA-218ENST00000560777 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
RABGGTA-218ENST00000560777 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
RABGGTA-218ENST00000560777 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
RABGGTA-218ENST00000560777 KDM4FA0A1W2PPD8 638 aa18.38■□□□□ 0.53
RABGGTA-218ENST00000560777 FAM50AQ14320 339 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-218ENST00000560777 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-218ENST00000560777 RTEL1-TNFRSF6BF6WH68 1400 aa18.38■□□□□ 0.53
RABGGTA-218ENST00000560777 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
RABGGTA-218ENST00000560777 ABCC5O15440 1437 aa18.36■□□□□ 0.53
RABGGTA-218ENST00000560777 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
RABGGTA-218ENST00000560777 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
RABGGTA-218ENST00000560777 ABCA6Q8N139 1617 aa18.36■□□□□ 0.53
RABGGTA-218ENST00000560777 INO80Q9ULG1 1556 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-218ENST00000560777 SIGLEC1Q9BZZ2 1709 aa18.34■□□□□ 0.53
RABGGTA-218ENST00000560777 DAPK1P53355 1430 aa18.32■□□□□ 0.52
RABGGTA-218ENST00000560777 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
RABGGTA-218ENST00000560777 DNMT1P26358 1616 aaKnown RBP18.3■□□□□ 0.52
RABGGTA-218ENST00000560777 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
RABGGTA-218ENST00000560777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
RABGGTA-218ENST00000560777 A2MP01023 1474 aa18.29■□□□□ 0.52
RABGGTA-218ENST00000560777 MLECQ14165 292 aa18.29■□□□□ 0.52
RABGGTA-218ENST00000560777 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
RABGGTA-218ENST00000560777 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-218ENST00000560777 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-218ENST00000560777 AGLP35573 1532 aa18.27■□□□□ 0.51
RABGGTA-218ENST00000560777 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
RABGGTA-218ENST00000560777 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
RABGGTA-218ENST00000560777 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
RABGGTA-218ENST00000560777 PTPRKQ15262 1439 aa18.25■□□□□ 0.51
RABGGTA-218ENST00000560777 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
RABGGTA-218ENST00000560777 CROCC2H7BZ55 1655 aa18.25■□□□□ 0.51
RABGGTA-218ENST00000560777 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
RABGGTA-218ENST00000560777 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
RABGGTA-218ENST00000560777 ITGAEP38570 1179 aa18.23■□□□□ 0.51
RABGGTA-218ENST00000560777 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
RABGGTA-218ENST00000560777 ANKRD30AQ9BXX3 1397 aa18.22■□□□□ 0.51
RABGGTA-218ENST00000560777 KIF3BO15066 747 aa18.21■□□□□ 0.51
RABGGTA-218ENST00000560777 KIF15Q9NS87 1388 aa18.2■□□□□ 0.5
RABGGTA-218ENST00000560777 GGT6Q6P531 493 aa18.2■□□□□ 0.5
RABGGTA-218ENST00000560777 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-218ENST00000560777 ADGRL2O95490 1459 aa18.19■□□□□ 0.5
RABGGTA-218ENST00000560777 DUOX2Q9NRD8 1548 aa18.18■□□□□ 0.5
RABGGTA-218ENST00000560777 MADDQ8WXG6 1647 aa18.17■□□□□ 0.5
RABGGTA-218ENST00000560777 ROCK1Q13464 1354 aa18.16■□□□□ 0.5
RABGGTA-218ENST00000560777 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
RABGGTA-218ENST00000560777 PTPRMP28827 1452 aa18.14■□□□□ 0.5
RABGGTA-218ENST00000560777 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-218ENST00000560777 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
RABGGTA-218ENST00000560777 RIMS1Q86UR5 1692 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-218ENST00000560777 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms