RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 MYT1Q01538 1121 aa28.76■■■□□ 2.2
PSMA4-218ENST00000560099 DNMT1P26358 1616 aaKnown RBP28.76■■■□□ 2.19
PSMA4-218ENST00000560099 EIF4G2P78344 907 aaKnown RBP eCLIP28.76■■■□□ 2.19
PSMA4-218ENST00000560099 RAPGEF6Q8TEU7 1601 aa28.75■■■□□ 2.19
PSMA4-218ENST00000560099 GRIN2AQ12879 1464 aa28.74■■■□□ 2.19
PSMA4-218ENST00000560099 ANKRD30BQ9BXX2 1392 aa28.73■■■□□ 2.19
PSMA4-218ENST00000560099 NEFLP07196 543 aa28.7■■■□□ 2.19
PSMA4-218ENST00000560099 EIF4G3O43432 1585 aaKnown RBP28.7■■■□□ 2.18
PSMA4-218ENST00000560099 C11orf95C9JLR9 678 aaPredicted RBP28.68■■■□□ 2.18
PSMA4-218ENST00000560099 RPRD2Q5VT52 1461 aaKnown RBP28.68■■■□□ 2.18
PSMA4-218ENST00000560099 NBPF8Q3BBV2 869 aa28.67■■■□□ 2.18
PSMA4-218ENST00000560099 CDK11AQ9UQ88 783 aaPredicted RBP28.66■■■□□ 2.18
PSMA4-218ENST00000560099 PRG4Q92954 1404 aaPredicted RBP28.65■■■□□ 2.18
PSMA4-218ENST00000560099 TEX14Q8IWB6 1497 aa28.64■■■□□ 2.18
PSMA4-218ENST00000560099 HNRNPUQ00839 825 aaKnown RBP eCLIP28.63■■■□□ 2.17
PSMA4-218ENST00000560099 SLC4A1APQ9BWU0 796 aaKnown RBP28.63■■■□□ 2.17
PSMA4-218ENST00000560099 CNTLNQ9NXG0 1405 aa28.62■■■□□ 2.17
PSMA4-218ENST00000560099 NCOA1Q15788 1441 aa28.61■■■□□ 2.17
PSMA4-218ENST00000560099 TROQ12816 1431 aaPredicted RBP28.6■■■□□ 2.17
PSMA4-218ENST00000560099 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
PSMA4-218ENST00000560099 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
PSMA4-218ENST00000560099 CCDC184Q52MB2 194 aa28.58■■■□□ 2.17
PSMA4-218ENST00000560099 CAMSAP2Q08AD1 1489 aa28.57■■■□□ 2.16
PSMA4-218ENST00000560099 CEP170Q5SW79 1584 aa28.57■■■□□ 2.16
PSMA4-218ENST00000560099 CFDP1Q9UEE9 299 aaPredicted RBP28.57■■■□□ 2.16
PSMA4-218ENST00000560099 PZPP20742 1482 aa28.55■■■□□ 2.16
PSMA4-218ENST00000560099 CHMP7Q8WUX9 453 aaPredicted RBP28.55■■■□□ 2.16
PSMA4-218ENST00000560099 GPATCH8Q9UKJ3 1502 aaKnown RBP28.54■■■□□ 2.16
PSMA4-218ENST00000560099 KIF14Q15058 1648 aa28.54■■■□□ 2.16
PSMA4-218ENST00000560099 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
PSMA4-218ENST00000560099 SPATA31E1Q6ZUB1 1445 aa28.52■■■□□ 2.16
PSMA4-218ENST00000560099 ZNF777Q9ULD5 760 aaPredicted RBP28.51■■■□□ 2.15
PSMA4-218ENST00000560099 ITSN2Q9NZM3 1697 aa28.5■■■□□ 2.15
PSMA4-218ENST00000560099 PRKRIP1Q9H875 184 aaPredicted RBP28.5■■■□□ 2.15
PSMA4-218ENST00000560099 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
PSMA4-218ENST00000560099 FBLN2P98095 1184 aa28.49■■■□□ 2.15
PSMA4-218ENST00000560099 ADGBQ8N7X0 1667 aa28.47■■■□□ 2.15
PSMA4-218ENST00000560099 KIF7Q2M1P5 1343 aa28.46■■■□□ 2.15
PSMA4-218ENST00000560099 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
PSMA4-218ENST00000560099 ADCY10Q96PN6 1610 aa28.46■■■□□ 2.15
PSMA4-218ENST00000560099 JPH4Q96JJ6 628 aa28.44■■■□□ 2.14
PSMA4-218ENST00000560099 CROCC2H7BZ55 1655 aa28.43■■■□□ 2.14
PSMA4-218ENST00000560099 ADGRL2O95490 1459 aa28.43■■■□□ 2.14
PSMA4-218ENST00000560099 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
PSMA4-218ENST00000560099 IRX6P78412 446 aaPredicted RBP28.4■■■□□ 2.14
PSMA4-218ENST00000560099 CARMIL2Q6F5E8 1435 aa28.4■■■□□ 2.14
PSMA4-218ENST00000560099 KIAA1107Q9UPP5 1409 aa28.4■■■□□ 2.14
PSMA4-218ENST00000560099 NUP160Q12769 1436 aa28.39■■■□□ 2.14
PSMA4-218ENST00000560099 FAM9BQ8IZU0 186 aa28.38■■■□□ 2.13
PSMA4-218ENST00000560099 MBD5Q9P267 1494 aa28.38■■■□□ 2.13
PSMA4-218ENST00000560099 PKD2Q13563 968 aa28.38■■■□□ 2.13
PSMA4-218ENST00000560099 MRS2Q9HD23 443 aa28.37■■■□□ 2.13
PSMA4-218ENST00000560099 ANKRD30AQ9BXX3 1397 aa28.36■■■□□ 2.13
PSMA4-218ENST00000560099 RBM19Q9Y4C8 960 aaKnown RBP28.35■■■□□ 2.13
PSMA4-218ENST00000560099 CDC42BPAQ5VT25 1732 aa28.34■■■□□ 2.13
PSMA4-218ENST00000560099 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
PSMA4-218ENST00000560099 PLEKHD1A6NEE1 506 aa28.31■■■□□ 2.12
PSMA4-218ENST00000560099 ZNF326Q5BKZ1 582 aaKnown RBP28.31■■■□□ 2.12
PSMA4-218ENST00000560099 ABCA8O94911 1581 aa28.3■■■□□ 2.12
PSMA4-218ENST00000560099 ABCC10Q5T3U5 1492 aa28.3■■■□□ 2.12
PSMA4-218ENST00000560099 BCORL1Q5H9F3 1711 aa28.29■■■□□ 2.12
PSMA4-218ENST00000560099 ATP10BO94823 1461 aa28.29■■■□□ 2.12
PSMA4-218ENST00000560099 USP47Q96K76 1375 aa28.27■■■□□ 2.12
PSMA4-218ENST00000560099 ZBED9Q6R2W3 1325 aa28.24■■■□□ 2.11
PSMA4-218ENST00000560099 C9orf84Q5VXU9 1444 aa28.24■■■□□ 2.11
PSMA4-218ENST00000560099 DHX29Q7Z478 1369 aaKnown RBP28.24■■■□□ 2.11
PSMA4-218ENST00000560099 ANP32EQ9BTT0 268 aa28.24■■■□□ 2.11
PSMA4-218ENST00000560099 NUP155O75694 1391 aa28.24■■■□□ 2.11
PSMA4-218ENST00000560099 KDM5CP41229 1560 aa28.21■■■□□ 2.11
PSMA4-218ENST00000560099 SHANK2Q9UPX8 1470 aa28.21■■■□□ 2.11
PSMA4-218ENST00000560099 POLR3GLQ9BT43 218 aa28.2■■■□□ 2.1
PSMA4-218ENST00000560099 CNGB1Q14028 1251 aaPredicted RBP28.18■■■□□ 2.1
PSMA4-218ENST00000560099 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
PSMA4-218ENST00000560099 TSPY4P0CV99 314 aa28.16■■■□□ 2.1
PSMA4-218ENST00000560099 TSPY10P0CW01 314 aa28.16■■■□□ 2.1
PSMA4-218ENST00000560099 UHRF1BP1Q6BDS2 1440 aa28.16■■■□□ 2.1
PSMA4-218ENST00000560099 ERICH6BQ5W0A0 696 aa28.14■■■□□ 2.1
PSMA4-218ENST00000560099 RALGAPBQ86X10 1494 aa28.12■■■□□ 2.09
PSMA4-218ENST00000560099 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
PSMA4-218ENST00000560099 KIF15Q9NS87 1388 aa28.12■■■□□ 2.09
PSMA4-218ENST00000560099 PPP4R2Q9NY27 417 aa28.11■■■□□ 2.09
PSMA4-218ENST00000560099 ARID4BQ4LE39 1312 aaPredicted RBP28.09■■■□□ 2.09
PSMA4-218ENST00000560099 CARD11Q9BXL7 1154 aa28.09■■■□□ 2.09
PSMA4-218ENST00000560099 KDM2AQ9Y2K7 1162 aa28.08■■■□□ 2.09
PSMA4-218ENST00000560099 ARHGEF12Q9NZN5 1544 aa28.08■■■□□ 2.09
PSMA4-218ENST00000560099 PTPRGP23470 1445 aa28.07■■■□□ 2.08
PSMA4-218ENST00000560099 ARHGEF5Q12774 1597 aa28.07■■■□□ 2.08
PSMA4-218ENST00000560099 CDC42BPBQ9Y5S2 1711 aa28.04■■■□□ 2.08
PSMA4-218ENST00000560099 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
PSMA4-218ENST00000560099 DCAF11Q8TEB1 546 aa28.03■■■□□ 2.08
PSMA4-218ENST00000560099 ST20-MTHFSA0A0A6YYL1 179 aa28.02■■■□□ 2.08
PSMA4-218ENST00000560099 ROCK2O75116 1388 aaKnown RBP27.99■■■□□ 2.07
PSMA4-218ENST00000560099 CCDC141Q6ZP82 1450 aa27.99■■■□□ 2.07
PSMA4-218ENST00000560099 B4GALNT3Q6L9W6 998 aa27.99■■■□□ 2.07
PSMA4-218ENST00000560099 PREX2Q70Z35 1606 aa27.98■■■□□ 2.07
PSMA4-218ENST00000560099 SMG6Q86US8 1419 aaKnown RBP27.97■■■□□ 2.07
PSMA4-218ENST00000560099 MSH5O43196 834 aa27.97■■■□□ 2.07
PSMA4-218ENST00000560099 FAM135AQ9P2D6 1515 aa27.96■■■□□ 2.07
PSMA4-218ENST00000560099 PNISRQ8TF01 805 aaKnown RBP27.96■■■□□ 2.07
PSMA4-218ENST00000560099 SENP3-EIF4A1A0A087X0R7 540 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms