RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 CDK11AQ9UQ88 783 aaPredicted RBP26.52■■□□□ 1.84
PDE8A-211ENST00000559742 GCC2Q8IWJ2 1684 aa26.49■■□□□ 1.83
PDE8A-211ENST00000559742 ZNF777Q9ULD5 760 aaPredicted RBP26.49■■□□□ 1.83
PDE8A-211ENST00000559742 DAPK1P53355 1430 aa26.44■■□□□ 1.82
PDE8A-211ENST00000559742 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
PDE8A-211ENST00000559742 MPHOSPH9Q99550 1183 aa26.44■■□□□ 1.82
PDE8A-211ENST00000559742 CARMIL2Q6F5E8 1435 aa26.42■■□□□ 1.82
PDE8A-211ENST00000559742 BCANQ96GW7 911 aa26.42■■□□□ 1.82
PDE8A-211ENST00000559742 CFDP1Q9UEE9 299 aaPredicted RBP26.42■■□□□ 1.82
PDE8A-211ENST00000559742 NUP160Q12769 1436 aa26.41■■□□□ 1.82
PDE8A-211ENST00000559742 ABCC5O15440 1437 aa26.41■■□□□ 1.82
PDE8A-211ENST00000559742 KIF14Q15058 1648 aa26.39■■□□□ 1.81
PDE8A-211ENST00000559742 TROQ12816 1431 aaPredicted RBP26.39■■□□□ 1.81
PDE8A-211ENST00000559742 RBM19Q9Y4C8 960 aaKnown RBP26.38■■□□□ 1.81
PDE8A-211ENST00000559742 AKNAQ7Z591 1439 aa26.37■■□□□ 1.81
PDE8A-211ENST00000559742 DNMT1P26358 1616 aaKnown RBP26.36■■□□□ 1.81
PDE8A-211ENST00000559742 FKBP8Q14318 412 aa26.33■■□□□ 1.81
PDE8A-211ENST00000559742 KDM5BQ9UGL1 1544 aa26.32■■□□□ 1.8
PDE8A-211ENST00000559742 CAMSAP2Q08AD1 1489 aa26.32■■□□□ 1.8
PDE8A-211ENST00000559742 GPATCH8Q9UKJ3 1502 aaKnown RBP26.3■■□□□ 1.8
PDE8A-211ENST00000559742 SLC4A1APQ9BWU0 796 aaKnown RBP26.29■■□□□ 1.8
PDE8A-211ENST00000559742 PLEKHD1A6NEE1 506 aa26.28■■□□□ 1.8
PDE8A-211ENST00000559742 ROCK1Q13464 1354 aa26.28■■□□□ 1.8
PDE8A-211ENST00000559742 L3MBTL2Q969R5 705 aa26.27■■□□□ 1.8
PDE8A-211ENST00000559742 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
PDE8A-211ENST00000559742 ATP10BO94823 1461 aa26.22■■□□□ 1.79
PDE8A-211ENST00000559742 ANP32CO43423 234 aa26.21■■□□□ 1.79
PDE8A-211ENST00000559742 ABCA8O94911 1581 aa26.2■■□□□ 1.79
PDE8A-211ENST00000559742 HSPA5P11021 654 aaKnown RBP26.19■■□□□ 1.78
PDE8A-211ENST00000559742 ADCY10Q96PN6 1610 aa26.18■■□□□ 1.78
PDE8A-211ENST00000559742 NCOA1Q15788 1441 aa26.18■■□□□ 1.78
PDE8A-211ENST00000559742 ANKRD30BQ9BXX2 1392 aa26.17■■□□□ 1.78
PDE8A-211ENST00000559742 MSH5O43196 834 aa26.16■■□□□ 1.78
PDE8A-211ENST00000559742 PTPRGP23470 1445 aa26.16■■□□□ 1.78
PDE8A-211ENST00000559742 CDC42BPAQ5VT25 1732 aa26.15■■□□□ 1.78
PDE8A-211ENST00000559742 CHD1O14646 1710 aa26.15■■□□□ 1.78
PDE8A-211ENST00000559742 NEFLP07196 543 aa26.11■■□□□ 1.77
PDE8A-211ENST00000559742 HNRNPMP52272 730 aaKnown RBP eCLIP26.11■■□□□ 1.771e-6■■■■□ 23.2
PDE8A-211ENST00000559742 EIF4G2P78344 907 aaKnown RBP eCLIP26.11■■□□□ 1.772e-9■■□□□ 12.5
PDE8A-211ENST00000559742 NBPF8Q3BBV2 869 aa26.11■■□□□ 1.77
PDE8A-211ENST00000559742 WASHC2AQ641Q2 1341 aa26.11■■□□□ 1.77
PDE8A-211ENST00000559742 ADGBQ8N7X0 1667 aa26.1■■□□□ 1.77
PDE8A-211ENST00000559742 RPRD2Q5VT52 1461 aaKnown RBP26.1■■□□□ 1.77
PDE8A-211ENST00000559742 PRKCSHP14314 528 aaPredicted RBP26.09■■□□□ 1.77
PDE8A-211ENST00000559742 PZPP20742 1482 aa26.09■■□□□ 1.77
PDE8A-211ENST00000559742 CROCC2H7BZ55 1655 aa26.09■■□□□ 1.77
PDE8A-211ENST00000559742 ANKRD30AQ9BXX3 1397 aa26.08■■□□□ 1.77
PDE8A-211ENST00000559742 ABCC10Q5T3U5 1492 aa26.08■■□□□ 1.77
PDE8A-211ENST00000559742 PKD2Q13563 968 aa26.06■■□□□ 1.76
PDE8A-211ENST00000559742 ZNF326Q5BKZ1 582 aaKnown RBP26.05■■□□□ 1.76
PDE8A-211ENST00000559742 ANKRD50Q9ULJ7 1429 aa26.05■■□□□ 1.76
PDE8A-211ENST00000559742 TSPY4P0CV99 314 aa26.03■■□□□ 1.76
PDE8A-211ENST00000559742 TSPY10P0CW01 314 aa26.03■■□□□ 1.76
PDE8A-211ENST00000559742 TEX14Q8IWB6 1497 aa26.03■■□□□ 1.76
PDE8A-211ENST00000559742 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
PDE8A-211ENST00000559742 C9orf84Q5VXU9 1444 aa26.02■■□□□ 1.76
PDE8A-211ENST00000559742 ADGRL2O95490 1459 aa26.01■■□□□ 1.76
PDE8A-211ENST00000559742 CCER2I3L3R5 266 aa26.01■■□□□ 1.75
PDE8A-211ENST00000559742 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.75
PDE8A-211ENST00000559742 FANCIQ9NVI1 1328 aa25.99■■□□□ 1.75
PDE8A-211ENST00000559742 NUP155O75694 1391 aa25.98■■□□□ 1.75
PDE8A-211ENST00000559742 KIAA1107Q9UPP5 1409 aa25.95■■□□□ 1.75
PDE8A-211ENST00000559742 KIF15Q9NS87 1388 aa25.93■■□□□ 1.74
PDE8A-211ENST00000559742 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
PDE8A-211ENST00000559742 SAMD9LQ8IVG5 1584 aa25.89■■□□□ 1.74
PDE8A-211ENST00000559742 ERICH6Q7L0X2 663 aa25.88■■□□□ 1.73
PDE8A-211ENST00000559742 MBD5Q9P267 1494 aa25.88■■□□□ 1.73
PDE8A-211ENST00000559742 SHANK2Q9UPX8 1470 aa25.88■■□□□ 1.73
PDE8A-211ENST00000559742 CNGB1Q14028 1251 aaPredicted RBP25.88■■□□□ 1.73
PDE8A-211ENST00000559742 POLR3GLQ9BT43 218 aa25.87■■□□□ 1.73
PDE8A-211ENST00000559742 CCDC7Q96M83 1385 aa25.86■■□□□ 1.73
PDE8A-211ENST00000559742 TTC37Q6PGP7 1564 aa25.86■■□□□ 1.73
PDE8A-211ENST00000559742 SHROOM2Q13796 1616 aa25.85■■□□□ 1.73
PDE8A-211ENST00000559742 PREX2Q70Z35 1606 aa25.85■■□□□ 1.73
PDE8A-211ENST00000559742 ARHGAP5Q13017 1502 aa25.84■■□□□ 1.73
PDE8A-211ENST00000559742 KDM2AQ9Y2K7 1162 aa25.84■■□□□ 1.73
PDE8A-211ENST00000559742 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
PDE8A-211ENST00000559742 SYCP2Q9BX26 1530 aa25.83■■□□□ 1.73
PDE8A-211ENST00000559742 MYT1LQ9UL68 1186 aa25.83■■□□□ 1.72
PDE8A-211ENST00000559742 CCDC184Q52MB2 194 aa25.82■■□□□ 1.72
PDE8A-211ENST00000559742 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
PDE8A-211ENST00000559742 KIF7Q2M1P5 1343 aa25.82■■□□□ 1.72
PDE8A-211ENST00000559742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.82■■□□□ 1.722e-6■■□□□ 13.7
PDE8A-211ENST00000559742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.81■■□□□ 1.722e-10■■■□□ 15.1
PDE8A-211ENST00000559742 HNRNPUQ00839 825 aaKnown RBP eCLIP25.8■■□□□ 1.725e-7■□□□□ 9.2
PDE8A-211ENST00000559742 SPATA31E1Q6ZUB1 1445 aa25.8■■□□□ 1.72
PDE8A-211ENST00000559742 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
PDE8A-211ENST00000559742 ABCC2Q92887 1545 aa25.78■■□□□ 1.72
PDE8A-211ENST00000559742 USP47Q96K76 1375 aa25.75■■□□□ 1.71
PDE8A-211ENST00000559742 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
PDE8A-211ENST00000559742 PRKRIP1Q9H875 184 aaPredicted RBP25.73■■□□□ 1.71
PDE8A-211ENST00000559742 DEKP35659 375 aaKnown RBP25.72■■□□□ 1.71
PDE8A-211ENST00000559742 FAM9BQ8IZU0 186 aa25.7■■□□□ 1.71
PDE8A-211ENST00000559742 MYO5CQ9NQX4 1742 aa25.7■■□□□ 1.71
PDE8A-211ENST00000559742 CLASP1Q7Z460 1538 aa25.7■■□□□ 1.7
PDE8A-211ENST00000559742 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
PDE8A-211ENST00000559742 FAM135AQ9P2D6 1515 aa25.69■■□□□ 1.7
PDE8A-211ENST00000559742 RGL3Q3MIN7 710 aa25.69■■□□□ 1.7
PDE8A-211ENST00000559742 CARD11Q9BXL7 1154 aa25.69■■□□□ 1.7
PDE8A-211ENST00000559742 KDM5DQ9BY66 1539 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms