RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RICTORQ6R327 1708 aa20.08■□□□□ 0.81
SMAD3-208ENST00000558827 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
SMAD3-208ENST00000558827 YEATS2Q9ULM3 1422 aa20.05■□□□□ 0.8
SMAD3-208ENST00000558827 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
SMAD3-208ENST00000558827 ZNF777Q9ULD5 760 aaPredicted RBP20.05■□□□□ 0.8
SMAD3-208ENST00000558827 MLECQ14165 292 aa20.04■□□□□ 0.8
SMAD3-208ENST00000558827 PLPPR3Q6T4P5 718 aa20.04■□□□□ 0.8
SMAD3-208ENST00000558827 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.79
SMAD3-208ENST00000558827 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.79
SMAD3-208ENST00000558827 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
SMAD3-208ENST00000558827 ZFYVE16Q7Z3T8 1539 aa19.99■□□□□ 0.79
SMAD3-208ENST00000558827 ARHGEF40Q8TER5 1519 aa19.99■□□□□ 0.79
SMAD3-208ENST00000558827 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
SMAD3-208ENST00000558827 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
SMAD3-208ENST00000558827 PREX2Q70Z35 1606 aa19.95■□□□□ 0.78
SMAD3-208ENST00000558827 SIGLEC1Q9BZZ2 1709 aa19.95■□□□□ 0.78
SMAD3-208ENST00000558827 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
SMAD3-208ENST00000558827 TRAPPC8Q9Y2L5 1435 aa19.94■□□□□ 0.78
SMAD3-208ENST00000558827 BCORL1Q5H9F3 1711 aa19.94■□□□□ 0.78
SMAD3-208ENST00000558827 HNRNPMP52272 730 aaKnown RBP eCLIP19.94■□□□□ 0.782e-6■■□□□ 12.5
SMAD3-208ENST00000558827 ADAMTSL3P82987 1691 aa19.94■□□□□ 0.78
SMAD3-208ENST00000558827 CCNB3Q8WWL7 1395 aa19.93■□□□□ 0.78
SMAD3-208ENST00000558827 GPATCH8Q9UKJ3 1502 aaKnown RBP19.92■□□□□ 0.78
SMAD3-208ENST00000558827 MADDQ8WXG6 1647 aa19.92■□□□□ 0.78
SMAD3-208ENST00000558827 CFDP1Q9UEE9 299 aaPredicted RBP19.92■□□□□ 0.78
SMAD3-208ENST00000558827 PTPRMP28827 1452 aa19.92■□□□□ 0.78
SMAD3-208ENST00000558827 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
SMAD3-208ENST00000558827 ZNF518AQ6AHZ1 1483 aa19.91■□□□□ 0.78
SMAD3-208ENST00000558827 ATP10AO60312 1499 aa19.9■□□□□ 0.78
SMAD3-208ENST00000558827 ZNF644Q9H582 1327 aaPredicted RBP19.89■□□□□ 0.77
SMAD3-208ENST00000558827 ABCC1P33527 1531 aa19.88■□□□□ 0.77
SMAD3-208ENST00000558827 RIMS1Q86UR5 1692 aaKnown RBP19.87■□□□□ 0.77
SMAD3-208ENST00000558827 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
SMAD3-208ENST00000558827 ITSN2Q9NZM3 1697 aa19.87■□□□□ 0.77
SMAD3-208ENST00000558827 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
SMAD3-208ENST00000558827 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
SMAD3-208ENST00000558827 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
SMAD3-208ENST00000558827 KDM5CP41229 1560 aa19.84■□□□□ 0.77
SMAD3-208ENST00000558827 SYCP2Q9BX26 1530 aa19.84■□□□□ 0.77
SMAD3-208ENST00000558827 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.77
SMAD3-208ENST00000558827 DIP2CQ9Y2E4 1556 aa19.82■□□□□ 0.76
SMAD3-208ENST00000558827 SPAG9O60271 1321 aaKnown RBP19.81■□□□□ 0.76
SMAD3-208ENST00000558827 ABCA6Q8N139 1617 aa19.81■□□□□ 0.76
SMAD3-208ENST00000558827 CEBPAP49715 358 aaPredicted RBP19.81■□□□□ 0.76
SMAD3-208ENST00000558827 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
SMAD3-208ENST00000558827 TIAM1Q13009 1591 aa19.81■□□□□ 0.76
SMAD3-208ENST00000558827 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
SMAD3-208ENST00000558827 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
SMAD3-208ENST00000558827 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
SMAD3-208ENST00000558827 FER1L4A9Z1Z3 1794 aa19.77■□□□□ 0.76
SMAD3-208ENST00000558827 SUPT6HQ7KZ85 1726 aaKnown RBP19.74■□□□□ 0.75
SMAD3-208ENST00000558827 HSPA2P54652 639 aa19.74■□□□□ 0.75
SMAD3-208ENST00000558827 KIAA1107Q9UPP5 1409 aa19.74■□□□□ 0.75
SMAD3-208ENST00000558827 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
SMAD3-208ENST00000558827 PLEKHH2Q8IVE3 1493 aa19.73■□□□□ 0.75
SMAD3-208ENST00000558827 APLP2Q06481 763 aa19.71■□□□□ 0.75
SMAD3-208ENST00000558827 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
SMAD3-208ENST00000558827 MBD5Q9P267 1494 aa19.69■□□□□ 0.74
SMAD3-208ENST00000558827 ATP7AQ04656 1500 aa19.69■□□□□ 0.74
SMAD3-208ENST00000558827 CAMSAP2Q08AD1 1489 aa19.67■□□□□ 0.74
SMAD3-208ENST00000558827 GGT6Q6P531 493 aa19.67■□□□□ 0.74
SMAD3-208ENST00000558827 REREQ9P2R6 1566 aa19.66■□□□□ 0.74
SMAD3-208ENST00000558827 LMTK3Q96Q04 1460 aa19.66■□□□□ 0.74
SMAD3-208ENST00000558827 AGLP35573 1532 aa19.65■□□□□ 0.74
SMAD3-208ENST00000558827 INO80Q9ULG1 1556 aaPredicted RBP19.65■□□□□ 0.74
SMAD3-208ENST00000558827 A2MP01023 1474 aa19.64■□□□□ 0.73
SMAD3-208ENST00000558827 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
SMAD3-208ENST00000558827 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
SMAD3-208ENST00000558827 TSPY4P0CV99 314 aa19.59■□□□□ 0.73
SMAD3-208ENST00000558827 TSPY10P0CW01 314 aa19.59■□□□□ 0.73
SMAD3-208ENST00000558827 C3P01024 1663 aa19.58■□□□□ 0.72
SMAD3-208ENST00000558827 KIF3BO15066 747 aa19.57■□□□□ 0.72
SMAD3-208ENST00000558827 MYOM3Q5VTT5 1437 aa19.57■□□□□ 0.72
SMAD3-208ENST00000558827 RSPH4AQ5TD94 716 aa19.56■□□□□ 0.72
SMAD3-208ENST00000558827 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
SMAD3-208ENST00000558827 ADGBQ8N7X0 1667 aa19.55■□□□□ 0.72
SMAD3-208ENST00000558827 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
SMAD3-208ENST00000558827 DHX29Q7Z478 1369 aaKnown RBP19.55■□□□□ 0.72
SMAD3-208ENST00000558827 PLXNC1O60486 1568 aa19.54■□□□□ 0.72
SMAD3-208ENST00000558827 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
SMAD3-208ENST00000558827 CLTCQ00610 1675 aaKnown RBP19.53■□□□□ 0.72
SMAD3-208ENST00000558827 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
SMAD3-208ENST00000558827 ARHGEF5Q12774 1597 aa19.52■□□□□ 0.71
SMAD3-208ENST00000558827 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.71
SMAD3-208ENST00000558827 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
SMAD3-208ENST00000558827 PREX1Q8TCU6 1659 aa19.51■□□□□ 0.71
SMAD3-208ENST00000558827 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
SMAD3-208ENST00000558827 MIA2Q96PC5 1412 aa19.5■□□□□ 0.71
SMAD3-208ENST00000558827 CHIC2Q9UKJ5 165 aa19.48■□□□□ 0.71
SMAD3-208ENST00000558827 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
SMAD3-208ENST00000558827 FAM50AQ14320 339 aaKnown RBP19.45■□□□□ 0.7
SMAD3-208ENST00000558827 FBXO31Q5XUX0 539 aaPredicted RBP19.45■□□□□ 0.7
SMAD3-208ENST00000558827 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
SMAD3-208ENST00000558827 WASHC2CQ9Y4E1 1318 aa19.44■□□□□ 0.7
SMAD3-208ENST00000558827 ABCC5O15440 1437 aa19.43■□□□□ 0.7
SMAD3-208ENST00000558827 FGD6Q6ZV73 1430 aa19.43■□□□□ 0.7
SMAD3-208ENST00000558827 MROH2AA6NES4 1674 aa19.43■□□□□ 0.7
SMAD3-208ENST00000558827 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
SMAD3-208ENST00000558827 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
SMAD3-208ENST00000558827 MAST1Q9Y2H9 1570 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms