RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	RASEF	Q8IZ41	740 aa		12.05	□□□□□ -0.48
MARK3-215	ENST00000558787	CUL7	Q14999	1698 aa		12.04	□□□□□ -0.48
MARK3-215	ENST00000558787	MS4A3	Q96HJ5	214 aa		12.03	□□□□□ -0.48
MARK3-215	ENST00000558787	FAM69C	Q0P6D2	419 aa		12	□□□□□ -0.49
MARK3-215	ENST00000558787	KIF12	Q96FN5	646 aa		12	□□□□□ -0.49
MARK3-215	ENST00000558787	ADCY10	Q96PN6	1610 aa		11.99	□□□□□ -0.49
MARK3-215	ENST00000558787	PTPRG	P23470	1445 aa		11.98	□□□□□ -0.49
MARK3-215	ENST00000558787	NUBP1	P53384	320 aa		11.97	□□□□□ -0.49
MARK3-215	ENST00000558787	KIF13A	Q9H1H9	1805 aa		11.97	□□□□□ -0.49
MARK3-215	ENST00000558787	ABCC10	Q5T3U5	1492 aa		11.95	□□□□□ -0.5
MARK3-215	ENST00000558787	TNIK	Q9UKE5	1360 aa		11.94	□□□□□ -0.5
MARK3-215	ENST00000558787	RAPGEF2	Q9Y4G8	1499 aa		11.94	□□□□□ -0.5
MARK3-215	ENST00000558787	CARMIL2	Q6F5E8	1435 aa		11.94	□□□□□ -0.5
MARK3-215	ENST00000558787	IQGAP2	Q13576	1575 aa		11.93	□□□□□ -0.5
MARK3-215	ENST00000558787	MAP3K13	O43283	966 aa		11.93	□□□□□ -0.5
MARK3-215	ENST00000558787	ASTL	Q6HA08	431 aa	Predicted RBP	11.93	□□□□□ -0.5
MARK3-215	ENST00000558787	FAM212A	Q96EL1	285 aa		11.93	□□□□□ -0.5
MARK3-215	ENST00000558787	MAPKBP1	O60336	1514 aa		11.91	□□□□□ -0.5
MARK3-215	ENST00000558787	DISP1	Q96F81	1524 aa		11.91	□□□□□ -0.5
MARK3-215	ENST00000558787	ATMIN	O43313	823 aa	Predicted RBP	11.91	□□□□□ -0.5
MARK3-215	ENST00000558787	VASP	P50552	380 aa	Predicted RBP	11.9	□□□□□ -0.5
MARK3-215	ENST00000558787	PELP1	Q8IZL8	1130 aa	Known RBP	11.9	□□□□□ -0.5
MARK3-215	ENST00000558787	DIP2B	Q9P265	1576 aa		11.9	□□□□□ -0.5
MARK3-215	ENST00000558787	KLHL34	Q8N239	644 aa		11.89	□□□□□ -0.51
MARK3-215	ENST00000558787	ABCC2	Q92887	1545 aa		11.87	□□□□□ -0.51
MARK3-215	ENST00000558787	DCAF8	Q5TAQ9	597 aa		11.87	□□□□□ -0.51
MARK3-215	ENST00000558787	SGIP1	Q9BQI5	828 aa		11.87	□□□□□ -0.51
MARK3-215	ENST00000558787	UACA	Q9BZF9	1416 aa		11.86	□□□□□ -0.51
MARK3-215	ENST00000558787	UGGT2	Q9NYU1	1516 aa		11.86	□□□□□ -0.51
MARK3-215	ENST00000558787	SLC39A7	Q92504	469 aa		11.86	□□□□□ -0.51
MARK3-215	ENST00000558787	ASXL2	Q76L83	1435 aa		11.86	□□□□□ -0.51
MARK3-215	ENST00000558787	TSPOAP1	O95153	1857 aa		11.85	□□□□□ -0.51
MARK3-215	ENST00000558787	C7	P10643	843 aa		11.85	□□□□□ -0.51
MARK3-215	ENST00000558787	PCDHB13	Q9Y5F0	798 aa		11.85	□□□□□ -0.51
MARK3-215	ENST00000558787	UHRF1BP1L	A0JNW5	1464 aa		11.83	□□□□□ -0.52
MARK3-215	ENST00000558787	PRX	Q9BXM0	1461 aa		11.83	□□□□□ -0.52
MARK3-215	ENST00000558787	TIE1	P35590	1138 aa		11.83	□□□□□ -0.52
MARK3-215	ENST00000558787	ATN1	P54259	1190 aa	Predicted RBP	11.83	□□□□□ -0.52
MARK3-215	ENST00000558787	METRN	Q9UJH8	293 aa		11.83	□□□□□ -0.52
MARK3-215	ENST00000558787	KIAA0556	O60303	1618 aa		11.82	□□□□□ -0.52
MARK3-215	ENST00000558787	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.82	□□□□□ -0.52
MARK3-215	ENST00000558787	TRPC6	Q9Y210	931 aa		11.82	□□□□□ -0.52
MARK3-215	ENST00000558787	P3H3	Q8IVL6	736 aa		11.81	□□□□□ -0.52
MARK3-215	ENST00000558787	PLB1	Q6P1J6	1458 aa		11.81	□□□□□ -0.52
MARK3-215	ENST00000558787	KDM5B	Q9UGL1	1544 aa		11.8	□□□□□ -0.52
MARK3-215	ENST00000558787	KDM6B	O15054	1643 aa		11.79	□□□□□ -0.52
MARK3-215	ENST00000558787	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.79	□□□□□ -0.52
MARK3-215	ENST00000558787	CTTNBP2	Q8WZ74	1663 aa		11.78	□□□□□ -0.52
MARK3-215	ENST00000558787	ARID3C	A6NKF2	412 aa		11.78	□□□□□ -0.52
MARK3-215	ENST00000558787	EPRS	P07814	1512 aa	Known RBP	11.77	□□□□□ -0.52
MARK3-215	ENST00000558787	POTEB2	H3BUK9	544 aa		11.77	□□□□□ -0.53
MARK3-215	ENST00000558787	RANGAP1	P46060	587 aa	Predicted RBP	11.77	□□□□□ -0.53
MARK3-215	ENST00000558787	KCNH8	Q96L42	1107 aa		11.77	□□□□□ -0.53
MARK3-215	ENST00000558787	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.77	□□□□□ -0.53
MARK3-215	ENST00000558787	GOLGA3	Q08378	1498 aa		11.76	□□□□□ -0.53
MARK3-215	ENST00000558787	GLI2	P10070	1586 aa		11.76	□□□□□ -0.53
MARK3-215	ENST00000558787	GSE1	Q14687	1217 aa		11.76	□□□□□ -0.53
MARK3-215	ENST00000558787	IFNL1	Q8IU54	200 aa		11.76	□□□□□ -0.53
MARK3-215	ENST00000558787	KDM4F	A0A1W2PPD8	638 aa		11.75	□□□□□ -0.53
MARK3-215	ENST00000558787	TTLL13P	A6NNM8	815 aa		11.75	□□□□□ -0.53
MARK3-215	ENST00000558787	PPRC1	Q5VV67	1664 aa	Known RBP	11.75	□□□□□ -0.53
MARK3-215	ENST00000558787	PYGB	P11216	843 aa		11.74	□□□□□ -0.53
MARK3-215	ENST00000558787	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.74	□□□□□ -0.53
MARK3-215	ENST00000558787	ABCA8	O94911	1581 aa		11.73	□□□□□ -0.53
MARK3-215	ENST00000558787	WDR7	Q9Y4E6	1490 aa		11.72	□□□□□ -0.53
MARK3-215	ENST00000558787	OTUD5	Q96G74	571 aa		11.72	□□□□□ -0.53
MARK3-215	ENST00000558787	MAP3K4	Q9Y6R4	1608 aa		11.71	□□□□□ -0.54
MARK3-215	ENST00000558787	TRIM35	Q9UPQ4	493 aa		11.69	□□□□□ -0.54
MARK3-215	ENST00000558787	SEC24B	O95487	1268 aa		11.68	□□□□□ -0.54
MARK3-215	ENST00000558787	MAMSTR	Q6ZN01	415 aa		11.68	□□□□□ -0.54
MARK3-215	ENST00000558787	SPOCK2	Q92563	424 aa		11.68	□□□□□ -0.54
MARK3-215	ENST00000558787	TMEM106C	Q9BVX2	250 aa		11.68	□□□□□ -0.54
MARK3-215	ENST00000558787	ATP10B	O94823	1461 aa		11.68	□□□□□ -0.54
MARK3-215	ENST00000558787	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.67	□□□□□ -0.54
MARK3-215	ENST00000558787	CD109	Q6YHK3	1445 aa		11.67	□□□□□ -0.54
MARK3-215	ENST00000558787	TEX14	Q8IWB6	1497 aa		11.66	□□□□□ -0.54
MARK3-215	ENST00000558787	EEA1	Q15075	1411 aa		11.66	□□□□□ -0.54
MARK3-215	ENST00000558787	IER5L	Q5T953	404 aa		11.65	□□□□□ -0.54
MARK3-215	ENST00000558787	SAMD9	Q5K651	1589 aa		11.65	□□□□□ -0.54
MARK3-215	ENST00000558787	FHOD3	Q2V2M9	1422 aa		11.64	□□□□□ -0.55
MARK3-215	ENST00000558787	PCDHB8	Q9UN66	801 aa		11.64	□□□□□ -0.55
MARK3-215	ENST00000558787	MAGI3	Q5TCQ9	1506 aa		11.62	□□□□□ -0.55
MARK3-215	ENST00000558787	POTEF	A5A3E0	1075 aa		11.62	□□□□□ -0.55
MARK3-215	ENST00000558787	POTEJ	P0CG39	1038 aa		11.62	□□□□□ -0.55
MARK3-215	ENST00000558787	CHRM1	P11229	460 aa	Predicted RBP	11.62	□□□□□ -0.55
MARK3-215	ENST00000558787	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.61	□□□□□ -0.55
MARK3-215	ENST00000558787	SCUBE2	Q9NQ36	999 aa		11.61	□□□□□ -0.55
MARK3-215	ENST00000558787	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.61	□□□□□ -0.55
MARK3-215	ENST00000558787	ADGRL1	O94910	1474 aa		11.61	□□□□□ -0.55
MARK3-215	ENST00000558787	CFAP43	Q8NDM7	1665 aa		11.6	□□□□□ -0.55
MARK3-215	ENST00000558787	UBTF	P17480	764 aa	Known RBP	11.6	□□□□□ -0.55
MARK3-215	ENST00000558787	COLQ	Q9Y215	455 aa	Predicted RBP	11.6	□□□□□ -0.55
MARK3-215	ENST00000558787	RAPGEF6	Q8TEU7	1601 aa		11.6	□□□□□ -0.55
MARK3-215	ENST00000558787	NUP153	P49790	1475 aa	Known RBP	11.59	□□□□□ -0.55
MARK3-215	ENST00000558787	KIF21B	O75037	1637 aa		11.57	□□□□□ -0.56
MARK3-215	ENST00000558787	RAPGEF3	O95398	923 aa		11.56	□□□□□ -0.56
MARK3-215	ENST00000558787	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.56	□□□□□ -0.56
MARK3-215	ENST00000558787	PLEKHD1	A6NEE1	506 aa		11.55	□□□□□ -0.56
MARK3-215	ENST00000558787	PLCG2	P16885	1265 aa		11.55	□□□□□ -0.56
MARK3-215	ENST00000558787	ABCA9	Q8IUA7	1624 aa		11.54	□□□□□ -0.56

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