RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
CHD8-214ENST00000557727 KIF13AQ9H1H9 1805 aa14.6□□□□□ -0.07
CHD8-214ENST00000557727 FMN1Q68DA7 1419 aa14.59□□□□□ -0.07
CHD8-214ENST00000557727 ATP10BO94823 1461 aa14.58□□□□□ -0.08
CHD8-214ENST00000557727 HECW1Q76N89 1606 aa14.57□□□□□ -0.08
CHD8-214ENST00000557727 CASKIN1Q8WXD9 1431 aa14.55□□□□□ -0.08
CHD8-214ENST00000557727 DIP2BQ9P265 1576 aa14.55□□□□□ -0.08
CHD8-214ENST00000557727 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
CHD8-214ENST00000557727 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
CHD8-214ENST00000557727 FYCO1Q9BQS8 1478 aa14.53□□□□□ -0.08
CHD8-214ENST00000557727 ASXL2Q76L83 1435 aa14.53□□□□□ -0.08
CHD8-214ENST00000557727 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
CHD8-214ENST00000557727 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
CHD8-214ENST00000557727 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
CHD8-214ENST00000557727 ABCC10Q5T3U5 1492 aa14.5□□□□□ -0.09
CHD8-214ENST00000557727 WDR7Q9Y4E6 1490 aa14.5□□□□□ -0.09
CHD8-214ENST00000557727 VPS8Q8N3P4 1428 aa14.49□□□□□ -0.09
CHD8-214ENST00000557727 GLI2P10070 1586 aa14.49□□□□□ -0.09
CHD8-214ENST00000557727 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHD8-214ENST00000557727 MAGI3Q5TCQ9 1506 aa14.47□□□□□ -0.09
CHD8-214ENST00000557727 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
CHD8-214ENST00000557727 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
CHD8-214ENST00000557727 PPRC1Q5VV67 1664 aaKnown RBP14.46□□□□□ -0.09
CHD8-214ENST00000557727 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
CHD8-214ENST00000557727 MAP3K4Q9Y6R4 1608 aa14.46□□□□□ -0.09
CHD8-214ENST00000557727 CCDC18Q5T9S5 1454 aa14.45□□□□□ -0.1
CHD8-214ENST00000557727 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
CHD8-214ENST00000557727 HAX1O00165 279 aa14.43□□□□□ -0.1
CHD8-214ENST00000557727 KIF14Q15058 1648 aa14.42□□□□□ -0.1
CHD8-214ENST00000557727 TIAM1Q13009 1591 aa14.41□□□□□ -0.1
CHD8-214ENST00000557727 TSPOAP1O95153 1857 aa14.41□□□□□ -0.1
CHD8-214ENST00000557727 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
CHD8-214ENST00000557727 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
CHD8-214ENST00000557727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHD8-214ENST00000557727 MAP3K1Q13233 1512 aa14.38□□□□□ -0.11
CHD8-214ENST00000557727 TROQ12816 1431 aaPredicted RBP14.38□□□□□ -0.11
CHD8-214ENST00000557727 FAM69CQ0P6D2 419 aa14.37□□□□□ -0.11
CHD8-214ENST00000557727 ATP1B4Q9UN42 357 aaPredicted RBP14.36□□□□□ -0.11
CHD8-214ENST00000557727 PLEKHD1A6NEE1 506 aa14.34□□□□□ -0.11
CHD8-214ENST00000557727 CDC42BPAQ5VT25 1732 aa14.33□□□□□ -0.12
CHD8-214ENST00000557727 EHBP1L1Q8N3D4 1523 aa14.33□□□□□ -0.12
CHD8-214ENST00000557727 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
CHD8-214ENST00000557727 MYO5CQ9NQX4 1742 aa14.32□□□□□ -0.12
CHD8-214ENST00000557727 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
CHD8-214ENST00000557727 CDC42BPBQ9Y5S2 1711 aa14.32□□□□□ -0.12
CHD8-214ENST00000557727 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
CHD8-214ENST00000557727 CD109Q6YHK3 1445 aa14.3□□□□□ -0.12
CHD8-214ENST00000557727 PREX2Q70Z35 1606 aa14.3□□□□□ -0.12
CHD8-214ENST00000557727 CDK11AQ9UQ88 783 aaPredicted RBP14.29□□□□□ -0.12
CHD8-214ENST00000557727 ARAP3Q8WWN8 1544 aa14.29□□□□□ -0.12
CHD8-214ENST00000557727 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
CHD8-214ENST00000557727 KANK4Q5T7N3 995 aaPredicted RBP14.27□□□□□ -0.13
CHD8-214ENST00000557727 COL17A1Q9UMD9 1497 aaPredicted RBP14.25□□□□□ -0.13
CHD8-214ENST00000557727 PLCH2O75038 1416 aa14.25□□□□□ -0.13
CHD8-214ENST00000557727 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
CHD8-214ENST00000557727 TEX14Q8IWB6 1497 aa14.25□□□□□ -0.13
CHD8-214ENST00000557727 GPATCH8Q9UKJ3 1502 aaKnown RBP14.24□□□□□ -0.13
CHD8-214ENST00000557727 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
CHD8-214ENST00000557727 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
CHD8-214ENST00000557727 EVX2Q03828 476 aa14.23□□□□□ -0.13
CHD8-214ENST00000557727 ITSN2Q9NZM3 1697 aa14.23□□□□□ -0.13
CHD8-214ENST00000557727 NEO1Q92859 1461 aa14.22□□□□□ -0.13
CHD8-214ENST00000557727 FANCAO15360 1455 aa14.21□□□□□ -0.13
CHD8-214ENST00000557727 KDM6BO15054 1643 aa14.21□□□□□ -0.13
CHD8-214ENST00000557727 FRMPD1Q5SYB0 1578 aa14.21□□□□□ -0.14
CHD8-214ENST00000557727 RICTORQ6R327 1708 aa14.21□□□□□ -0.14
CHD8-214ENST00000557727 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
CHD8-214ENST00000557727 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
CHD8-214ENST00000557727 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
CHD8-214ENST00000557727 AKNAQ7Z591 1439 aa14.17□□□□□ -0.14
CHD8-214ENST00000557727 ABCC1P33527 1531 aa14.17□□□□□ -0.14
CHD8-214ENST00000557727 ARHGEF12Q9NZN5 1544 aa14.16□□□□□ -0.14
CHD8-214ENST00000557727 PHLDB1Q86UU1 1377 aa14.15□□□□□ -0.14
CHD8-214ENST00000557727 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
CHD8-214ENST00000557727 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
CHD8-214ENST00000557727 ADGRL1O94910 1474 aa14.13□□□□□ -0.15
CHD8-214ENST00000557727 MYOM3Q5VTT5 1437 aa14.13□□□□□ -0.15
CHD8-214ENST00000557727 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
CHD8-214ENST00000557727 KDM5CP41229 1560 aa14.12□□□□□ -0.15
CHD8-214ENST00000557727 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
CHD8-214ENST00000557727 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
CHD8-214ENST00000557727 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
CHD8-214ENST00000557727 POGZQ7Z3K3 1410 aa14.11□□□□□ -0.15
CHD8-214ENST00000557727 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
CHD8-214ENST00000557727 MBD5Q9P267 1494 aa14.1□□□□□ -0.15
CHD8-214ENST00000557727 MIA2Q96PC5 1412 aa14.09□□□□□ -0.15
CHD8-214ENST00000557727 SCAPERQ9BY12 1400 aa14.09□□□□□ -0.15
CHD8-214ENST00000557727 DENND4BO75064 1496 aaPredicted RBP14.09□□□□□ -0.15
CHD8-214ENST00000557727 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
CHD8-214ENST00000557727 PTPN23Q9H3S7 1636 aa14.08□□□□□ -0.15
CHD8-214ENST00000557727 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.15
CHD8-214ENST00000557727 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.15
CHD8-214ENST00000557727 CFDP1Q9UEE9 299 aaPredicted RBP14.08□□□□□ -0.16
CHD8-214ENST00000557727 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
CHD8-214ENST00000557727 TCOF1Q13428 1488 aaKnown RBP14.07□□□□□ -0.16
CHD8-214ENST00000557727 RAPGEF3O95398 923 aa14.07□□□□□ -0.16
CHD8-214ENST00000557727 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
CHD8-214ENST00000557727 ARHGEF5Q12774 1597 aa14.06□□□□□ -0.16
CHD8-214ENST00000557727 SIGLEC1Q9BZZ2 1709 aa14.06□□□□□ -0.16
CHD8-214ENST00000557727 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms