RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 PREX2Q70Z35 1606 aa25.51■■□□□ 1.67
PCNX4-213ENST00000556907 KDM6BO15054 1643 aa25.5■■□□□ 1.67
PCNX4-213ENST00000556907 CDC42BPAQ5VT25 1732 aa25.49■■□□□ 1.67
PCNX4-213ENST00000556907 ARHGAP5Q13017 1502 aa25.49■■□□□ 1.67
PCNX4-213ENST00000556907 AKNAQ7Z591 1439 aa25.49■■□□□ 1.67
PCNX4-213ENST00000556907 CDC42BPBQ9Y5S2 1711 aa25.48■■□□□ 1.67
PCNX4-213ENST00000556907 ITSN2Q9NZM3 1697 aa25.46■■□□□ 1.67
PCNX4-213ENST00000556907 CFDP1Q9UEE9 299 aaPredicted RBP25.45■■□□□ 1.66
PCNX4-213ENST00000556907 ADGRL1O94910 1474 aa25.4■■□□□ 1.66
PCNX4-213ENST00000556907 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
PCNX4-213ENST00000556907 DENND4BO75064 1496 aaPredicted RBP25.4■■□□□ 1.66
PCNX4-213ENST00000556907 PLEKHH2Q8IVE3 1493 aa25.39■■□□□ 1.65
PCNX4-213ENST00000556907 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
PCNX4-213ENST00000556907 MIA2Q96PC5 1412 aa25.37■■□□□ 1.65
PCNX4-213ENST00000556907 MYOM3Q5VTT5 1437 aa25.36■■□□□ 1.65
PCNX4-213ENST00000556907 KIAA1107Q9UPP5 1409 aa25.36■■□□□ 1.65
PCNX4-213ENST00000556907 ZNF777Q9ULD5 760 aaPredicted RBP25.34■■□□□ 1.65
PCNX4-213ENST00000556907 ABCC1P33527 1531 aa25.32■■□□□ 1.64
PCNX4-213ENST00000556907 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
PCNX4-213ENST00000556907 RAPGEF3O95398 923 aa25.31■■□□□ 1.64
PCNX4-213ENST00000556907 POGZQ7Z3K3 1410 aa25.3■■□□□ 1.64
PCNX4-213ENST00000556907 RSPH4AQ5TD94 716 aa25.3■■□□□ 1.64
PCNX4-213ENST00000556907 RICTORQ6R327 1708 aa25.29■■□□□ 1.64
PCNX4-213ENST00000556907 ZNF518AQ6AHZ1 1483 aa25.29■■□□□ 1.64
PCNX4-213ENST00000556907 MAGI2Q86UL8 1455 aa25.26■■□□□ 1.63
PCNX4-213ENST00000556907 FRMPD1Q5SYB0 1578 aa25.26■■□□□ 1.63
PCNX4-213ENST00000556907 ZMYM4Q5VZL5 1548 aa25.25■■□□□ 1.63
PCNX4-213ENST00000556907 ARHGEF12Q9NZN5 1544 aa25.24■■□□□ 1.63
PCNX4-213ENST00000556907 CAMSAP2Q08AD1 1489 aa25.24■■□□□ 1.63
PCNX4-213ENST00000556907 SYCP2Q9BX26 1530 aa25.23■■□□□ 1.63
PCNX4-213ENST00000556907 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
PCNX4-213ENST00000556907 ZNF644Q9H582 1327 aaPredicted RBP25.23■■□□□ 1.63
PCNX4-213ENST00000556907 HNRNPMP52272 730 aaKnown RBP eCLIP25.22■■□□□ 1.63
PCNX4-213ENST00000556907 AFAP1Q8N556 730 aa25.22■■□□□ 1.63
PCNX4-213ENST00000556907 KDM5CP41229 1560 aa25.22■■□□□ 1.63
PCNX4-213ENST00000556907 MBD5Q9P267 1494 aa25.21■■□□□ 1.63
PCNX4-213ENST00000556907 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.63
PCNX4-213ENST00000556907 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
PCNX4-213ENST00000556907 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
PCNX4-213ENST00000556907 MLH3Q9UHC1 1453 aa25.18■■□□□ 1.62
PCNX4-213ENST00000556907 ARHGEF5Q12774 1597 aa25.18■■□□□ 1.62
PCNX4-213ENST00000556907 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
PCNX4-213ENST00000556907 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
PCNX4-213ENST00000556907 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
PCNX4-213ENST00000556907 HECW2Q9P2P5 1572 aa25.14■■□□□ 1.61
PCNX4-213ENST00000556907 ZFYVE16Q7Z3T8 1539 aa25.13■■□□□ 1.61
PCNX4-213ENST00000556907 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
PCNX4-213ENST00000556907 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
PCNX4-213ENST00000556907 MYT1LQ9UL68 1186 aa25.12■■□□□ 1.61
PCNX4-213ENST00000556907 RTEL1-TNFRSF6BF6WH68 1400 aa25.12■■□□□ 1.61
PCNX4-213ENST00000556907 ARHGEF40Q8TER5 1519 aa25.11■■□□□ 1.61
PCNX4-213ENST00000556907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.1■■□□□ 1.61
PCNX4-213ENST00000556907 ATP10AO60312 1499 aa25.07■■□□□ 1.6
PCNX4-213ENST00000556907 YEATS2Q9ULM3 1422 aa25.06■■□□□ 1.6
PCNX4-213ENST00000556907 ATP7AQ04656 1500 aa25.06■■□□□ 1.6
PCNX4-213ENST00000556907 KIDINS220Q9ULH0 1771 aa25.05■■□□□ 1.6
PCNX4-213ENST00000556907 RRBP1Q9P2E9 1410 aaKnown RBP25.05■■□□□ 1.6
PCNX4-213ENST00000556907 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
PCNX4-213ENST00000556907 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
PCNX4-213ENST00000556907 MAST1Q9Y2H9 1570 aa25.03■■□□□ 1.6
PCNX4-213ENST00000556907 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
PCNX4-213ENST00000556907 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
PCNX4-213ENST00000556907 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
PCNX4-213ENST00000556907 ABCC5O15440 1437 aa25.02■■□□□ 1.6
PCNX4-213ENST00000556907 DAPK1P53355 1430 aa25.02■■□□□ 1.6
PCNX4-213ENST00000556907 REREQ9P2R6 1566 aa25.01■■□□□ 1.59
PCNX4-213ENST00000556907 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
PCNX4-213ENST00000556907 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
PCNX4-213ENST00000556907 ABCA6Q8N139 1617 aa24.99■■□□□ 1.59
PCNX4-213ENST00000556907 CROCC2H7BZ55 1655 aa24.97■■□□□ 1.59
PCNX4-213ENST00000556907 ADGBQ8N7X0 1667 aa24.95■■□□□ 1.58
PCNX4-213ENST00000556907 ARID4BQ4LE39 1312 aaPredicted RBP24.93■■□□□ 1.58
PCNX4-213ENST00000556907 AGLP35573 1532 aa24.93■■□□□ 1.58
PCNX4-213ENST00000556907 A2MP01023 1474 aa24.93■■□□□ 1.58
PCNX4-213ENST00000556907 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
PCNX4-213ENST00000556907 DHX29Q7Z478 1369 aaKnown RBP24.92■■□□□ 1.58
PCNX4-213ENST00000556907 ANKRD30AQ9BXX3 1397 aa24.91■■□□□ 1.58
PCNX4-213ENST00000556907 ADGRL2O95490 1459 aa24.89■■□□□ 1.57
PCNX4-213ENST00000556907 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
PCNX4-213ENST00000556907 ROCK1Q13464 1354 aa24.86■■□□□ 1.57
PCNX4-213ENST00000556907 DUOX2Q9NRD8 1548 aa24.85■■□□□ 1.57
PCNX4-213ENST00000556907 KIF15Q9NS87 1388 aa24.84■■□□□ 1.57
PCNX4-213ENST00000556907 CHIC2Q9UKJ5 165 aa24.84■■□□□ 1.57
PCNX4-213ENST00000556907 BCORL1Q5H9F3 1711 aa24.83■■□□□ 1.57
PCNX4-213ENST00000556907 PTPRKQ15262 1439 aa24.82■■□□□ 1.56
PCNX4-213ENST00000556907 SIGLEC1Q9BZZ2 1709 aa24.82■■□□□ 1.56
PCNX4-213ENST00000556907 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
PCNX4-213ENST00000556907 PPP6R1Q9UPN7 881 aa24.8■■□□□ 1.56
PCNX4-213ENST00000556907 ERBINQ96RT1 1412 aa24.79■■□□□ 1.56
PCNX4-213ENST00000556907 ITGAEP38570 1179 aa24.79■■□□□ 1.56
PCNX4-213ENST00000556907 EIF2AK4Q9P2K8 1649 aaKnown RBP24.78■■□□□ 1.56
PCNX4-213ENST00000556907 ADAMTSL3P82987 1691 aa24.78■■□□□ 1.56
PCNX4-213ENST00000556907 KDM4FA0A1W2PPD8 638 aa24.77■■□□□ 1.56
PCNX4-213ENST00000556907 KIF3BO15066 747 aa24.76■■□□□ 1.55
PCNX4-213ENST00000556907 MLECQ14165 292 aa24.75■■□□□ 1.55
PCNX4-213ENST00000556907 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
PCNX4-213ENST00000556907 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
PCNX4-213ENST00000556907 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
PCNX4-213ENST00000556907 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
PCNX4-213ENST00000556907 GGT6Q6P531 493 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms