RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 ZNF644Q9H582 1327 aaPredicted RBP29.84■■■□□ 2.37
RGMA-208ENST00000556658 MAPKBP1O60336 1514 aa29.8■■■□□ 2.36
RGMA-208ENST00000556658 ARHGAP5Q13017 1502 aa29.8■■■□□ 2.36
RGMA-208ENST00000556658 PLCH2O75038 1416 aa29.79■■■□□ 2.36
RGMA-208ENST00000556658 ABCA9Q8IUA7 1624 aa29.79■■■□□ 2.36
RGMA-208ENST00000556658 DNMT1P26358 1616 aaKnown RBP29.77■■■□□ 2.36
RGMA-208ENST00000556658 PTPRKQ15262 1439 aa29.76■■■□□ 2.35
RGMA-208ENST00000556658 DAPK1P53355 1430 aa29.75■■■□□ 2.35
RGMA-208ENST00000556658 EFCAB2Q5VUJ9 269 aa29.73■■■□□ 2.35
RGMA-208ENST00000556658 ARAP3Q8WWN8 1544 aa29.73■■■□□ 2.35
RGMA-208ENST00000556658 SAMD9LQ8IVG5 1584 aa29.71■■■□□ 2.35
RGMA-208ENST00000556658 ABCC5O15440 1437 aa29.71■■■□□ 2.35
RGMA-208ENST00000556658 SETD5Q9C0A6 1442 aa29.71■■■□□ 2.35
RGMA-208ENST00000556658 PLEKHH2Q8IVE3 1493 aa29.68■■■□□ 2.34
RGMA-208ENST00000556658 CHIC2Q9UKJ5 165 aa29.68■■■□□ 2.34
RGMA-208ENST00000556658 RSPH4AQ5TD94 716 aa29.67■■■□□ 2.34
RGMA-208ENST00000556658 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
RGMA-208ENST00000556658 ARHGEF5Q12774 1597 aa29.65■■■□□ 2.34
RGMA-208ENST00000556658 HNRNPMP52272 730 aaKnown RBP eCLIP29.65■■■□□ 2.34
RGMA-208ENST00000556658 HFM1A2PYH4 1435 aa29.64■■■□□ 2.34
RGMA-208ENST00000556658 CROCC2H7BZ55 1655 aa29.64■■■□□ 2.34
RGMA-208ENST00000556658 KIAA1107Q9UPP5 1409 aa29.63■■■□□ 2.33
RGMA-208ENST00000556658 RAB3GAP2Q9H2M9 1393 aa29.63■■■□□ 2.33
RGMA-208ENST00000556658 CD109Q6YHK3 1445 aa29.62■■■□□ 2.33
RGMA-208ENST00000556658 ROCK1Q13464 1354 aa29.62■■■□□ 2.33
RGMA-208ENST00000556658 MBD5Q9P267 1494 aa29.61■■■□□ 2.33
RGMA-208ENST00000556658 AKNAQ7Z591 1439 aa29.61■■■□□ 2.33
RGMA-208ENST00000556658 TSPY4P0CV99 314 aa29.61■■■□□ 2.33
RGMA-208ENST00000556658 TSPY10P0CW01 314 aa29.61■■■□□ 2.33
RGMA-208ENST00000556658 FANCAO15360 1455 aa29.6■■■□□ 2.33
RGMA-208ENST00000556658 HRCP23327 699 aa29.6■■■□□ 2.33
RGMA-208ENST00000556658 SYCP2Q9BX26 1530 aa29.6■■■□□ 2.33
RGMA-208ENST00000556658 NAIPQ13075 1403 aa29.58■■■□□ 2.33
RGMA-208ENST00000556658 RRP7BPQ9NSQ0 103 aa29.58■■■□□ 2.33
RGMA-208ENST00000556658 CCDC141Q6ZP82 1450 aa29.58■■■□□ 2.33
RGMA-208ENST00000556658 ADGBQ8N7X0 1667 aa29.58■■■□□ 2.33
RGMA-208ENST00000556658 SHANK2Q9UPX8 1470 aa29.57■■■□□ 2.32
RGMA-208ENST00000556658 GLI2P10070 1586 aa29.57■■■□□ 2.32
RGMA-208ENST00000556658 GCC2Q8IWJ2 1684 aa29.56■■■□□ 2.32
RGMA-208ENST00000556658 ABCC1P33527 1531 aa29.55■■■□□ 2.32
RGMA-208ENST00000556658 CFAP74Q9C0B2 1584 aa29.53■■■□□ 2.32
RGMA-208ENST00000556658 C9orf84Q5VXU9 1444 aa29.53■■■□□ 2.32
RGMA-208ENST00000556658 ANKRD30AQ9BXX3 1397 aa29.52■■■□□ 2.32
RGMA-208ENST00000556658 ADGRL2O95490 1459 aa29.52■■■□□ 2.32
RGMA-208ENST00000556658 DIP2BQ9P265 1576 aa29.51■■■□□ 2.31
RGMA-208ENST00000556658 MAP3K4Q9Y6R4 1608 aa29.5■■■□□ 2.31
RGMA-208ENST00000556658 NCOA1Q15788 1441 aa29.5■■■□□ 2.31
RGMA-208ENST00000556658 ARHGEF12Q9NZN5 1544 aa29.5■■■□□ 2.31
RGMA-208ENST00000556658 FAM69CQ0P6D2 419 aa29.5■■■□□ 2.31
RGMA-208ENST00000556658 DNAJC5Q9H3Z4 198 aa29.5■■■□□ 2.31
RGMA-208ENST00000556658 ADGRL1O94910 1474 aa29.47■■■□□ 2.31
RGMA-208ENST00000556658 ZEB1P37275 1124 aaPredicted RBP29.46■■■□□ 2.31
RGMA-208ENST00000556658 MAST1Q9Y2H9 1570 aa29.45■■■□□ 2.3
RGMA-208ENST00000556658 ACIN1Q9UKV3 1341 aaKnown RBP29.43■■■□□ 2.3
RGMA-208ENST00000556658 SCAPERQ9BY12 1400 aa29.42■■■□□ 2.3
RGMA-208ENST00000556658 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
RGMA-208ENST00000556658 TRAPPC8Q9Y2L5 1435 aa29.42■■■□□ 2.3
RGMA-208ENST00000556658 NEO1Q92859 1461 aa29.41■■■□□ 2.3
RGMA-208ENST00000556658 AFAP1Q8N556 730 aa29.37■■■□□ 2.29
RGMA-208ENST00000556658 KDM6BO15054 1643 aa29.36■■■□□ 2.29
RGMA-208ENST00000556658 KIF13AQ9H1H9 1805 aa29.35■■■□□ 2.29
RGMA-208ENST00000556658 SPAG9O60271 1321 aaKnown RBP29.35■■■□□ 2.29
RGMA-208ENST00000556658 KIF15Q9NS87 1388 aa29.35■■■□□ 2.29
RGMA-208ENST00000556658 CLSPNQ9HAW4 1339 aa29.34■■■□□ 2.29
RGMA-208ENST00000556658 TSPOAP1O95153 1857 aa29.33■■■□□ 2.29
RGMA-208ENST00000556658 PLXNC1O60486 1568 aa29.33■■■□□ 2.29
RGMA-208ENST00000556658 RTEL1-TNFRSF6BF6WH68 1400 aa29.33■■■□□ 2.29
RGMA-208ENST00000556658 ANKRD50Q9ULJ7 1429 aa29.33■■■□□ 2.29
RGMA-208ENST00000556658 ZNF518AQ6AHZ1 1483 aa29.31■■■□□ 2.28
RGMA-208ENST00000556658 TRIM52Q96A61 297 aa29.3■■■□□ 2.28
RGMA-208ENST00000556658 TEX14Q8IWB6 1497 aa29.3■■■□□ 2.28
RGMA-208ENST00000556658 MYT1LQ9UL68 1186 aa29.26■■■□□ 2.27
RGMA-208ENST00000556658 POGZQ7Z3K3 1410 aa29.26■■■□□ 2.27
RGMA-208ENST00000556658 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
RGMA-208ENST00000556658 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
RGMA-208ENST00000556658 DENND4BO75064 1496 aaPredicted RBP29.25■■■□□ 2.27
RGMA-208ENST00000556658 ATP7AQ04656 1500 aa29.24■■■□□ 2.27
RGMA-208ENST00000556658 DUOX2Q9NRD8 1548 aa29.24■■■□□ 2.27
RGMA-208ENST00000556658 INO80Q9ULG1 1556 aaPredicted RBP29.24■■■□□ 2.27
RGMA-208ENST00000556658 KDM5CP41229 1560 aa29.2■■■□□ 2.27
RGMA-208ENST00000556658 ERBINQ96RT1 1412 aa29.16■■■□□ 2.26
RGMA-208ENST00000556658 KIDINS220Q9ULH0 1771 aa29.16■■■□□ 2.26
RGMA-208ENST00000556658 RAPGEF3O95398 923 aa29.16■■■□□ 2.26
RGMA-208ENST00000556658 RICTORQ6R327 1708 aa29.16■■■□□ 2.26
RGMA-208ENST00000556658 MLH3Q9UHC1 1453 aa29.15■■■□□ 2.26
RGMA-208ENST00000556658 MPHOSPH9Q99550 1183 aa29.15■■■□□ 2.26
RGMA-208ENST00000556658 HECW2Q9P2P5 1572 aa29.14■■■□□ 2.26
RGMA-208ENST00000556658 SLC4A1APQ9BWU0 796 aaKnown RBP29.1■■■□□ 2.25
RGMA-208ENST00000556658 NUP155O75694 1391 aa29.09■■■□□ 2.25
RGMA-208ENST00000556658 TRHP20396 242 aaPredicted RBP29.08■■■□□ 2.25
RGMA-208ENST00000556658 DHX29Q7Z478 1369 aaKnown RBP29.06■■■□□ 2.24
RGMA-208ENST00000556658 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
RGMA-208ENST00000556658 PZPP20742 1482 aa29.05■■■□□ 2.24
RGMA-208ENST00000556658 UNC13BO14795 1591 aa29.05■■■□□ 2.24
RGMA-208ENST00000556658 FRMPD1Q5SYB0 1578 aa29.03■■■□□ 2.24
RGMA-208ENST00000556658 EIF2AK4Q9P2K8 1649 aaKnown RBP29.01■■■□□ 2.24
RGMA-208ENST00000556658 A2MP01023 1474 aa29.01■■■□□ 2.24
RGMA-208ENST00000556658 ZMYM4Q5VZL5 1548 aa29.01■■■□□ 2.23
RGMA-208ENST00000556658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.23
RGMA-208ENST00000556658 ABCA6Q8N139 1617 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms