RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 EFCAB2Q5VUJ9 269 aa37.45■■■■□ 3.59
RCCD1-206ENST00000556618 ARHGAP5Q13017 1502 aa37.45■■■■□ 3.59
RCCD1-206ENST00000556618 CFAP74Q9C0B2 1584 aa37.44■■■■□ 3.58
RCCD1-206ENST00000556618 PHLDB1Q86UU1 1377 aa37.42■■■■□ 3.58
RCCD1-206ENST00000556618 ITSN2Q9NZM3 1697 aa37.41■■■■□ 3.58
RCCD1-206ENST00000556618 AKNAQ7Z591 1439 aa37.39■■■■□ 3.58
RCCD1-206ENST00000556618 PPARGC1BQ86YN6 1023 aaKnown RBP37.38■■■■□ 3.58
RCCD1-206ENST00000556618 CFDP1Q9UEE9 299 aaPredicted RBP37.38■■■■□ 3.57
RCCD1-206ENST00000556618 KDM6BO15054 1643 aa37.35■■■■□ 3.57
RCCD1-206ENST00000556618 COL17A1Q9UMD9 1497 aaPredicted RBP37.33■■■■□ 3.57
RCCD1-206ENST00000556618 ZNF777Q9ULD5 760 aaPredicted RBP37.3■■■■□ 3.56
RCCD1-206ENST00000556618 MYOM3Q5VTT5 1437 aa37.29■■■■□ 3.56
RCCD1-206ENST00000556618 ADGRL1O94910 1474 aa37.28■■■■□ 3.56
RCCD1-206ENST00000556618 SAMD9LQ8IVG5 1584 aa37.26■■■■□ 3.56
RCCD1-206ENST00000556618 SCAPERQ9BY12 1400 aa37.24■■■■□ 3.55
RCCD1-206ENST00000556618 MIA2Q96PC5 1412 aa37.22■■■■□ 3.55
RCCD1-206ENST00000556618 ZNF644Q9H582 1327 aaPredicted RBP37.21■■■■□ 3.55
RCCD1-206ENST00000556618 ABCC1P33527 1531 aa37.21■■■■□ 3.55
RCCD1-206ENST00000556618 DENND4BO75064 1496 aaPredicted RBP37.21■■■■□ 3.55
RCCD1-206ENST00000556618 RAPGEF3O95398 923 aa37.19■■■■□ 3.54
RCCD1-206ENST00000556618 PLEKHH2Q8IVE3 1493 aa37.17■■■■□ 3.54
RCCD1-206ENST00000556618 ARHGEF12Q9NZN5 1544 aa37.17■■■■□ 3.54
RCCD1-206ENST00000556618 RICTORQ6R327 1708 aa37.16■■■■□ 3.54
RCCD1-206ENST00000556618 KIAA1107Q9UPP5 1409 aa37.15■■■■□ 3.54
RCCD1-206ENST00000556618 FGD6Q6ZV73 1430 aa37.14■■■■□ 3.54
RCCD1-206ENST00000556618 FRMPD1Q5SYB0 1578 aa37.14■■■■□ 3.54
RCCD1-206ENST00000556618 CAMSAP2Q08AD1 1489 aa37.14■■■■□ 3.54
RCCD1-206ENST00000556618 SYCP2Q9BX26 1530 aa37.13■■■■□ 3.53
RCCD1-206ENST00000556618 POGZQ7Z3K3 1410 aa37.12■■■■□ 3.53
RCCD1-206ENST00000556618 HNRNPMP52272 730 aaKnown RBP eCLIP37.12■■■■□ 3.538e-13■■■□□ 16.5
RCCD1-206ENST00000556618 PTPN23Q9H3S7 1636 aa37.09■■■■□ 3.53
RCCD1-206ENST00000556618 TRAPPC8Q9Y2L5 1435 aa37.08■■■■□ 3.53
RCCD1-206ENST00000556618 AFAP1Q8N556 730 aa37.07■■■■□ 3.52
RCCD1-206ENST00000556618 ZNF518AQ6AHZ1 1483 aa37.07■■■■□ 3.52
RCCD1-206ENST00000556618 MBD5Q9P267 1494 aa37.05■■■■□ 3.52
RCCD1-206ENST00000556618 TCOF1Q13428 1488 aaKnown RBP37.02■■■■□ 3.52
RCCD1-206ENST00000556618 KDM5CP41229 1560 aa37.01■■■■□ 3.51
RCCD1-206ENST00000556618 ZMYM4Q5VZL5 1548 aa37■■■■□ 3.51
RCCD1-206ENST00000556618 ARHGEF5Q12774 1597 aa36.97■■■■□ 3.51
RCCD1-206ENST00000556618 RSPH4AQ5TD94 716 aa36.96■■■■□ 3.51
RCCD1-206ENST00000556618 CCDC141Q6ZP82 1450 aa36.93■■■■□ 3.5
RCCD1-206ENST00000556618 FAM50AQ14320 339 aaKnown RBP36.92■■■■□ 3.5
RCCD1-206ENST00000556618 MAGI2Q86UL8 1455 aa36.92■■■■□ 3.5
RCCD1-206ENST00000556618 MLH3Q9UHC1 1453 aa36.9■■■■□ 3.5
RCCD1-206ENST00000556618 HECW2Q9P2P5 1572 aa36.9■■■■□ 3.5
RCCD1-206ENST00000556618 SPAG9O60271 1321 aaKnown RBP36.88■■■■□ 3.5
RCCD1-206ENST00000556618 RRBP1Q9P2E9 1410 aaKnown RBP36.87■■■■□ 3.49
RCCD1-206ENST00000556618 ZFYVE16Q7Z3T8 1539 aa36.86■■■■□ 3.49
RCCD1-206ENST00000556618 MYT1LQ9UL68 1186 aa36.86■■■■□ 3.49
RCCD1-206ENST00000556618 KIDINS220Q9ULH0 1771 aa36.85■■■■□ 3.49
RCCD1-206ENST00000556618 DNMT1P26358 1616 aaKnown RBP36.85■■■■□ 3.49
RCCD1-206ENST00000556618 YEATS2Q9ULM3 1422 aa36.85■■■■□ 3.49
RCCD1-206ENST00000556618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.83■■■■□ 3.49
RCCD1-206ENST00000556618 TSPY4P0CV99 314 aa36.83■■■■□ 3.49
RCCD1-206ENST00000556618 TSPY10P0CW01 314 aa36.83■■■■□ 3.49
RCCD1-206ENST00000556618 ABCC5O15440 1437 aa36.82■■■■□ 3.49
RCCD1-206ENST00000556618 ARHGEF40Q8TER5 1519 aa36.82■■■■□ 3.48
RCCD1-206ENST00000556618 INO80Q9ULG1 1556 aaPredicted RBP36.82■■■■□ 3.48
RCCD1-206ENST00000556618 ATP7AQ04656 1500 aa36.81■■■■□ 3.48
RCCD1-206ENST00000556618 DAPK1P53355 1430 aa36.8■■■■□ 3.48
RCCD1-206ENST00000556618 RTEL1-TNFRSF6BF6WH68 1400 aa36.79■■■■□ 3.48
RCCD1-206ENST00000556618 CROCC2H7BZ55 1655 aa36.79■■■■□ 3.48
RCCD1-206ENST00000556618 MAST1Q9Y2H9 1570 aa36.76■■■■□ 3.47
RCCD1-206ENST00000556618 ABCA6Q8N139 1617 aa36.76■■■■□ 3.47
RCCD1-206ENST00000556618 DIP2CQ9Y2E4 1556 aa36.74■■■■□ 3.47
RCCD1-206ENST00000556618 ATP10AO60312 1499 aa36.73■■■■□ 3.47
RCCD1-206ENST00000556618 C9orf84Q5VXU9 1444 aa36.73■■■■□ 3.47
RCCD1-206ENST00000556618 SHANK2Q9UPX8 1470 aa36.72■■■■□ 3.47
RCCD1-206ENST00000556618 CHIC2Q9UKJ5 165 aa36.65■■■■□ 3.46
RCCD1-206ENST00000556618 PTPRKQ15262 1439 aa36.64■■■■□ 3.46
RCCD1-206ENST00000556618 ADGBQ8N7X0 1667 aa36.64■■■■□ 3.46
RCCD1-206ENST00000556618 ITGAEP38570 1179 aa36.63■■■■□ 3.45
RCCD1-206ENST00000556618 PLXNC1O60486 1568 aa36.61■■■■□ 3.45
RCCD1-206ENST00000556618 REREQ9P2R6 1566 aa36.61■■■■□ 3.45
RCCD1-206ENST00000556618 SIGLEC1Q9BZZ2 1709 aa36.61■■■■□ 3.45
RCCD1-206ENST00000556618 A2MP01023 1474 aa36.58■■■■□ 3.45
RCCD1-206ENST00000556618 ADGRL2O95490 1459 aa36.56■■■■□ 3.44
RCCD1-206ENST00000556618 ANKRD30AQ9BXX3 1397 aa36.56■■■■□ 3.44
RCCD1-206ENST00000556618 NCOA1Q15788 1441 aa36.55■■■■□ 3.44
RCCD1-206ENST00000556618 ARID4BQ4LE39 1312 aaPredicted RBP36.54■■■■□ 3.44
RCCD1-206ENST00000556618 DHX29Q7Z478 1369 aaKnown RBP36.53■■■■□ 3.44
RCCD1-206ENST00000556618 RRP7BPQ9NSQ0 103 aa36.53■■■■□ 3.44
RCCD1-206ENST00000556618 KIF15Q9NS87 1388 aa36.51■■■■□ 3.44
RCCD1-206ENST00000556618 AGLP35573 1532 aa36.5■■■■□ 3.43
RCCD1-206ENST00000556618 ROCK1Q13464 1354 aa36.49■■■■□ 3.43
RCCD1-206ENST00000556618 DUOX2Q9NRD8 1548 aa36.47■■■■□ 3.43
RCCD1-206ENST00000556618 BCORL1Q5H9F3 1711 aa36.42■■■■□ 3.42
RCCD1-206ENST00000556618 MLECQ14165 292 aa36.38■■■■□ 3.41
RCCD1-206ENST00000556618 KIF3BO15066 747 aa36.36■■■■□ 3.41
RCCD1-206ENST00000556618 ERBINQ96RT1 1412 aa36.36■■■■□ 3.41
RCCD1-206ENST00000556618 EIF2AK4Q9P2K8 1649 aaKnown RBP36.36■■■■□ 3.41
RCCD1-206ENST00000556618 ADAMTSL3P82987 1691 aa36.33■■■■□ 3.41
RCCD1-206ENST00000556618 ANKRD50Q9ULJ7 1429 aa36.32■■■■□ 3.4
RCCD1-206ENST00000556618 KDM4FA0A1W2PPD8 638 aa36.29■■■■□ 3.4
RCCD1-206ENST00000556618 GGT6Q6P531 493 aa36.29■■■■□ 3.4
RCCD1-206ENST00000556618 NAIPQ13075 1403 aa36.26■■■■□ 3.4
RCCD1-206ENST00000556618 RNF17Q9BXT8 1623 aaKnown RBP36.25■■■■□ 3.39
RCCD1-206ENST00000556618 GCC2Q8IWJ2 1684 aa36.25■■■■□ 3.39
RCCD1-206ENST00000556618 HFM1A2PYH4 1435 aa36.24■■■■□ 3.39
RCCD1-206ENST00000556618 FER1L4A9Z1Z3 1794 aa36.23■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms