RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PHLDB1Q86UU1 1377 aa17.42■□□□□ 0.38
FOXN3-212ENST00000556541 TEX14Q8IWB6 1497 aa17.42■□□□□ 0.38
FOXN3-212ENST00000556541 FAM69CQ0P6D2 419 aa17.41■□□□□ 0.38
FOXN3-212ENST00000556541 NEO1Q92859 1461 aa17.41■□□□□ 0.38
FOXN3-212ENST00000556541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
FOXN3-212ENST00000556541 FGD6Q6ZV73 1430 aa17.39■□□□□ 0.38
FOXN3-212ENST00000556541 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.38
FOXN3-212ENST00000556541 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
FOXN3-212ENST00000556541 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
FOXN3-212ENST00000556541 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
FOXN3-212ENST00000556541 FANCAO15360 1455 aa17.37■□□□□ 0.37
FOXN3-212ENST00000556541 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
FOXN3-212ENST00000556541 KIAA1107Q9UPP5 1409 aa17.36■□□□□ 0.37
FOXN3-212ENST00000556541 SAMD9LQ8IVG5 1584 aa17.36■□□□□ 0.37
FOXN3-212ENST00000556541 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
FOXN3-212ENST00000556541 ABCC1P33527 1531 aa17.35■□□□□ 0.37
FOXN3-212ENST00000556541 TSPOAP1O95153 1857 aa17.34■□□□□ 0.37
FOXN3-212ENST00000556541 ARHGEF5Q12774 1597 aa17.33■□□□□ 0.37
FOXN3-212ENST00000556541 CFDP1Q9UEE9 299 aaPredicted RBP17.33■□□□□ 0.36
FOXN3-212ENST00000556541 CAMSAP2Q08AD1 1489 aa17.32■□□□□ 0.36
FOXN3-212ENST00000556541 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
FOXN3-212ENST00000556541 DNMT1P26358 1616 aaKnown RBP17.29■□□□□ 0.36
FOXN3-212ENST00000556541 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
FOXN3-212ENST00000556541 ADGRL1O94910 1474 aa17.28■□□□□ 0.36
FOXN3-212ENST00000556541 MBD5Q9P267 1494 aa17.28■□□□□ 0.36
FOXN3-212ENST00000556541 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
FOXN3-212ENST00000556541 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
FOXN3-212ENST00000556541 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
FOXN3-212ENST00000556541 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
FOXN3-212ENST00000556541 KDM5CP41229 1560 aa17.25■□□□□ 0.35
FOXN3-212ENST00000556541 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
FOXN3-212ENST00000556541 MAST1Q9Y2H9 1570 aa17.24■□□□□ 0.35
FOXN3-212ENST00000556541 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
FOXN3-212ENST00000556541 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
FOXN3-212ENST00000556541 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
FOXN3-212ENST00000556541 POGZQ7Z3K3 1410 aa17.23■□□□□ 0.35
FOXN3-212ENST00000556541 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
FOXN3-212ENST00000556541 DENND4BO75064 1496 aaPredicted RBP17.23■□□□□ 0.35
FOXN3-212ENST00000556541 SCAPERQ9BY12 1400 aa17.22■□□□□ 0.35
FOXN3-212ENST00000556541 FRMPD1Q5SYB0 1578 aa17.21■□□□□ 0.35
FOXN3-212ENST00000556541 DAPK1P53355 1430 aa17.2■□□□□ 0.34
FOXN3-212ENST00000556541 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
FOXN3-212ENST00000556541 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
FOXN3-212ENST00000556541 ABCC5O15440 1437 aa17.19■□□□□ 0.34
FOXN3-212ENST00000556541 MAGI2Q86UL8 1455 aa17.18■□□□□ 0.34
FOXN3-212ENST00000556541 KDM6BO15054 1643 aa17.18■□□□□ 0.34
FOXN3-212ENST00000556541 ADGBQ8N7X0 1667 aa17.18■□□□□ 0.34
FOXN3-212ENST00000556541 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
FOXN3-212ENST00000556541 INO80Q9ULG1 1556 aaPredicted RBP17.18■□□□□ 0.34
FOXN3-212ENST00000556541 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
FOXN3-212ENST00000556541 MLH3Q9UHC1 1453 aa17.18■□□□□ 0.34
FOXN3-212ENST00000556541 PLXNC1O60486 1568 aa17.17■□□□□ 0.34
FOXN3-212ENST00000556541 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
FOXN3-212ENST00000556541 HECW2Q9P2P5 1572 aa17.16■□□□□ 0.34
FOXN3-212ENST00000556541 COL17A1Q9UMD9 1497 aaPredicted RBP17.15■□□□□ 0.34
FOXN3-212ENST00000556541 ZFYVE16Q7Z3T8 1539 aa17.15■□□□□ 0.34
FOXN3-212ENST00000556541 ROCK1Q13464 1354 aa17.15■□□□□ 0.34
FOXN3-212ENST00000556541 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
FOXN3-212ENST00000556541 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
FOXN3-212ENST00000556541 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.33
FOXN3-212ENST00000556541 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
FOXN3-212ENST00000556541 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.33
FOXN3-212ENST00000556541 ILDR1Q86SU0 546 aaPredicted RBP17.13■□□□□ 0.33
FOXN3-212ENST00000556541 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
FOXN3-212ENST00000556541 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
FOXN3-212ENST00000556541 TSPY4P0CV99 314 aa17.1■□□□□ 0.33
FOXN3-212ENST00000556541 TSPY10P0CW01 314 aa17.1■□□□□ 0.33
FOXN3-212ENST00000556541 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
FOXN3-212ENST00000556541 ARHGEF40Q8TER5 1519 aa17.09■□□□□ 0.33
FOXN3-212ENST00000556541 GCC2Q8IWJ2 1684 aa17.08■□□□□ 0.32
FOXN3-212ENST00000556541 NCOA1Q15788 1441 aa17.08■□□□□ 0.32
FOXN3-212ENST00000556541 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
FOXN3-212ENST00000556541 AFAP1Q8N556 730 aa17.08■□□□□ 0.32
FOXN3-212ENST00000556541 ANKRD30AQ9BXX3 1397 aa17.07■□□□□ 0.32
FOXN3-212ENST00000556541 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
FOXN3-212ENST00000556541 BCORL1Q5H9F3 1711 aa17.06■□□□□ 0.32
FOXN3-212ENST00000556541 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
FOXN3-212ENST00000556541 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
FOXN3-212ENST00000556541 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
FOXN3-212ENST00000556541 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
FOXN3-212ENST00000556541 EIF2AK4Q9P2K8 1649 aaKnown RBP17.04■□□□□ 0.32
FOXN3-212ENST00000556541 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
FOXN3-212ENST00000556541 ATP10AO60312 1499 aa17.01■□□□□ 0.31
FOXN3-212ENST00000556541 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
FOXN3-212ENST00000556541 AGLP35573 1532 aa17.01■□□□□ 0.31
FOXN3-212ENST00000556541 KIF15Q9NS87 1388 aa17■□□□□ 0.31
FOXN3-212ENST00000556541 NAIPQ13075 1403 aa16.99■□□□□ 0.31
FOXN3-212ENST00000556541 YEATS2Q9ULM3 1422 aa16.99■□□□□ 0.31
FOXN3-212ENST00000556541 A2MP01023 1474 aa16.99■□□□□ 0.31
FOXN3-212ENST00000556541 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
FOXN3-212ENST00000556541 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
FOXN3-212ENST00000556541 HRCP23327 699 aa16.96■□□□□ 0.31
FOXN3-212ENST00000556541 DEPDC5O75140 1603 aa16.96■□□□□ 0.3
FOXN3-212ENST00000556541 RNF17Q9BXT8 1623 aaKnown RBP16.96■□□□□ 0.3
FOXN3-212ENST00000556541 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.3
FOXN3-212ENST00000556541 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.3
FOXN3-212ENST00000556541 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
FOXN3-212ENST00000556541 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
FOXN3-212ENST00000556541 ITGAEP38570 1179 aa16.93■□□□□ 0.3
FOXN3-212ENST00000556541 UNC13BO14795 1591 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms