RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PRG4Q92954 1404 aaPredicted RBP20.05■□□□□ 0.8
NEK9-209ENST00000556170 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
NEK9-209ENST00000556170 ANP32EQ9BTT0 268 aa20.05■□□□□ 0.8
NEK9-209ENST00000556170 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
NEK9-209ENST00000556170 MRC2Q9UBG0 1479 aa20.04■□□□□ 0.8
NEK9-209ENST00000556170 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
NEK9-209ENST00000556170 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.79
NEK9-209ENST00000556170 CC2D1BQ5T0F9 858 aaKnown RBP20.01■□□□□ 0.79
NEK9-209ENST00000556170 EPRSP07814 1512 aaKnown RBP20.01■□□□□ 0.79
NEK9-209ENST00000556170 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
NEK9-209ENST00000556170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
NEK9-209ENST00000556170 CCDC184Q52MB2 194 aa20■□□□□ 0.79
NEK9-209ENST00000556170 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
NEK9-209ENST00000556170 CUL7Q14999 1698 aa19.99■□□□□ 0.79
NEK9-209ENST00000556170 NPM1P06748 294 aaKnown RBP eCLIP19.98■□□□□ 0.79
NEK9-209ENST00000556170 PTPRGP23470 1445 aa19.97■□□□□ 0.79
NEK9-209ENST00000556170 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
NEK9-209ENST00000556170 C11orf95C9JLR9 678 aaPredicted RBP19.96■□□□□ 0.79
NEK9-209ENST00000556170 KIF7Q2M1P5 1343 aa19.94■□□□□ 0.78
NEK9-209ENST00000556170 NPM2Q86SE8 214 aaKnown RBP19.94■□□□□ 0.78
NEK9-209ENST00000556170 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
NEK9-209ENST00000556170 IQGAP2Q13576 1575 aa19.92■□□□□ 0.78
NEK9-209ENST00000556170 RBM19Q9Y4C8 960 aaKnown RBP19.91■□□□□ 0.78
NEK9-209ENST00000556170 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
NEK9-209ENST00000556170 SUPT6HQ7KZ85 1726 aaKnown RBP19.9■□□□□ 0.78
NEK9-209ENST00000556170 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
NEK9-209ENST00000556170 CCDC7Q96M83 1385 aa19.9■□□□□ 0.78
NEK9-209ENST00000556170 USP47Q96K76 1375 aa19.89■□□□□ 0.77
NEK9-209ENST00000556170 MIA2Q96PC5 1412 aa19.88■□□□□ 0.77
NEK9-209ENST00000556170 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
NEK9-209ENST00000556170 KIAA0586Q9BVV6 1533 aa19.88■□□□□ 0.77
NEK9-209ENST00000556170 ANKRD50Q9ULJ7 1429 aa19.87■□□□□ 0.77
NEK9-209ENST00000556170 DAPK1P53355 1430 aa19.87■□□□□ 0.77
NEK9-209ENST00000556170 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
NEK9-209ENST00000556170 EFCAB2Q5VUJ9 269 aa19.85■□□□□ 0.77
NEK9-209ENST00000556170 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
NEK9-209ENST00000556170 HECW1Q76N89 1606 aa19.84■□□□□ 0.77
NEK9-209ENST00000556170 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
NEK9-209ENST00000556170 TROQ12816 1431 aaPredicted RBP19.84■□□□□ 0.77
NEK9-209ENST00000556170 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.77
NEK9-209ENST00000556170 ABCC5O15440 1437 aa19.83■□□□□ 0.76
NEK9-209ENST00000556170 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.76
NEK9-209ENST00000556170 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
NEK9-209ENST00000556170 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
NEK9-209ENST00000556170 KIF3BO15066 747 aa19.78■□□□□ 0.76
NEK9-209ENST00000556170 TNNT2P45379 298 aaPredicted RBP19.78■□□□□ 0.76
NEK9-209ENST00000556170 TMF1P82094 1093 aa19.78■□□□□ 0.76
NEK9-209ENST00000556170 ANKRD30BQ9BXX2 1392 aa19.78■□□□□ 0.76
NEK9-209ENST00000556170 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
NEK9-209ENST00000556170 CNTLNQ9NXG0 1405 aa19.77■□□□□ 0.76
NEK9-209ENST00000556170 GGT6Q6P531 493 aa19.76■□□□□ 0.75
NEK9-209ENST00000556170 NBPF1Q3BBV0 1214 aa19.76■□□□□ 0.75
NEK9-209ENST00000556170 CTTNBP2Q8WZ74 1663 aa19.76■□□□□ 0.75
NEK9-209ENST00000556170 ANP32AP39687 249 aaKnown RBP19.75■□□□□ 0.75
NEK9-209ENST00000556170 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
NEK9-209ENST00000556170 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
NEK9-209ENST00000556170 CFAP43Q8NDM7 1665 aa19.75■□□□□ 0.75
NEK9-209ENST00000556170 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
NEK9-209ENST00000556170 SPAG9O60271 1321 aaKnown RBP19.74■□□□□ 0.75
NEK9-209ENST00000556170 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
NEK9-209ENST00000556170 UGGT2Q9NYU1 1516 aa19.73■□□□□ 0.75
NEK9-209ENST00000556170 NEUROD2Q15784 382 aa19.72■□□□□ 0.75
NEK9-209ENST00000556170 NBR1Q14596 966 aa19.72■□□□□ 0.75
NEK9-209ENST00000556170 STAG3Q9UJ98 1225 aa19.72■□□□□ 0.75
NEK9-209ENST00000556170 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
NEK9-209ENST00000556170 PANK3Q9H999 370 aa19.7■□□□□ 0.74
NEK9-209ENST00000556170 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
NEK9-209ENST00000556170 RTL5Q5HYW3 569 aaPredicted RBP19.69■□□□□ 0.74
NEK9-209ENST00000556170 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
NEK9-209ENST00000556170 KIAA1107Q9UPP5 1409 aa19.69■□□□□ 0.74
NEK9-209ENST00000556170 MAGI3Q5TCQ9 1506 aa19.69■□□□□ 0.74
NEK9-209ENST00000556170 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
NEK9-209ENST00000556170 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
NEK9-209ENST00000556170 ZBED9Q6R2W3 1325 aa19.69■□□□□ 0.74
NEK9-209ENST00000556170 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
NEK9-209ENST00000556170 NUDCQ9Y266 331 aa19.68■□□□□ 0.74
NEK9-209ENST00000556170 ROCK1Q13464 1354 aa19.68■□□□□ 0.74
NEK9-209ENST00000556170 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
NEK9-209ENST00000556170 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
NEK9-209ENST00000556170 CAMSAP2Q08AD1 1489 aa19.67■□□□□ 0.74
NEK9-209ENST00000556170 RALBP1Q15311 655 aa19.66■□□□□ 0.74
NEK9-209ENST00000556170 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
NEK9-209ENST00000556170 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
NEK9-209ENST00000556170 NLRP13Q86W25 1043 aa19.64■□□□□ 0.74
NEK9-209ENST00000556170 AKNAQ7Z591 1439 aa19.64■□□□□ 0.73
NEK9-209ENST00000556170 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
NEK9-209ENST00000556170 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
NEK9-209ENST00000556170 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
NEK9-209ENST00000556170 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
NEK9-209ENST00000556170 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
NEK9-209ENST00000556170 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
NEK9-209ENST00000556170 MAGI1Q96QZ7 1491 aaPredicted RBP19.59■□□□□ 0.73
NEK9-209ENST00000556170 KANK1Q14678 1352 aa19.59■□□□□ 0.73
NEK9-209ENST00000556170 SAMD9Q5K651 1589 aa19.58■□□□□ 0.73
NEK9-209ENST00000556170 PLIN1O60240 522 aa19.58■□□□□ 0.73
NEK9-209ENST00000556170 ZBTB47Q9UFB7 747 aaPredicted RBP19.58■□□□□ 0.72
NEK9-209ENST00000556170 DISP1Q96F81 1524 aa19.57■□□□□ 0.72
NEK9-209ENST00000556170 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
NEK9-209ENST00000556170 WDR62O43379 1518 aa19.57■□□□□ 0.72
NEK9-209ENST00000556170 ARHGAP5Q13017 1502 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms