RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
SNX6-206ENST00000556162 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
SNX6-206ENST00000556162 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
SNX6-206ENST00000556162 ZNF777Q9ULD5 760 aaPredicted RBP21.92■■□□□ 1.1
SNX6-206ENST00000556162 PREX2Q70Z35 1606 aa21.92■■□□□ 1.1
SNX6-206ENST00000556162 CDC42BPAQ5VT25 1732 aa21.92■■□□□ 1.1
SNX6-206ENST00000556162 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
SNX6-206ENST00000556162 CDC42BPBQ9Y5S2 1711 aa21.9■■□□□ 1.1
SNX6-206ENST00000556162 KDM6BO15054 1643 aa21.88■■□□□ 1.09
SNX6-206ENST00000556162 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
SNX6-206ENST00000556162 ADGRL1O94910 1474 aa21.87■■□□□ 1.09
SNX6-206ENST00000556162 COL17A1Q9UMD9 1497 aaPredicted RBP21.87■■□□□ 1.09
SNX6-206ENST00000556162 MYOM3Q5VTT5 1437 aa21.86■■□□□ 1.09
SNX6-206ENST00000556162 SCAPERQ9BY12 1400 aa21.85■■□□□ 1.09
SNX6-206ENST00000556162 RAPGEF3O95398 923 aa21.83■■□□□ 1.09
SNX6-206ENST00000556162 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.09
SNX6-206ENST00000556162 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
SNX6-206ENST00000556162 MIA2Q96PC5 1412 aa21.82■■□□□ 1.08
SNX6-206ENST00000556162 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
SNX6-206ENST00000556162 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.08
SNX6-206ENST00000556162 SAMD9LQ8IVG5 1584 aa21.79■■□□□ 1.08
SNX6-206ENST00000556162 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
SNX6-206ENST00000556162 ABCC1P33527 1531 aa21.77■■□□□ 1.08
SNX6-206ENST00000556162 AFAP1Q8N556 730 aa21.77■■□□□ 1.08
SNX6-206ENST00000556162 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
SNX6-206ENST00000556162 ARHGEF12Q9NZN5 1544 aa21.76■■□□□ 1.07
SNX6-206ENST00000556162 POGZQ7Z3K3 1410 aa21.76■■□□□ 1.07
SNX6-206ENST00000556162 CAMSAP2Q08AD1 1489 aa21.75■■□□□ 1.07
SNX6-206ENST00000556162 ZNF518AQ6AHZ1 1483 aa21.74■■□□□ 1.07
SNX6-206ENST00000556162 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
SNX6-206ENST00000556162 RSPH4AQ5TD94 716 aa21.73■■□□□ 1.07
SNX6-206ENST00000556162 TRAPPC8Q9Y2L5 1435 aa21.73■■□□□ 1.07
SNX6-206ENST00000556162 RICTORQ6R327 1708 aa21.71■■□□□ 1.07
SNX6-206ENST00000556162 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
SNX6-206ENST00000556162 MBD5Q9P267 1494 aa21.7■■□□□ 1.06
SNX6-206ENST00000556162 FRMPD1Q5SYB0 1578 aa21.7■■□□□ 1.06
SNX6-206ENST00000556162 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
SNX6-206ENST00000556162 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
SNX6-206ENST00000556162 TCOF1Q13428 1488 aaKnown RBP21.67■■□□□ 1.06
SNX6-206ENST00000556162 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
SNX6-206ENST00000556162 TSPY4P0CV99 314 aa21.66■■□□□ 1.06
SNX6-206ENST00000556162 TSPY10P0CW01 314 aa21.66■■□□□ 1.06
SNX6-206ENST00000556162 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
SNX6-206ENST00000556162 KDM5CP41229 1560 aa21.65■■□□□ 1.06
SNX6-206ENST00000556162 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
SNX6-206ENST00000556162 CCDC141Q6ZP82 1450 aa21.65■■□□□ 1.06
SNX6-206ENST00000556162 ARHGEF5Q12774 1597 aa21.63■■□□□ 1.05
SNX6-206ENST00000556162 MLH3Q9UHC1 1453 aa21.63■■□□□ 1.05
SNX6-206ENST00000556162 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
SNX6-206ENST00000556162 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
SNX6-206ENST00000556162 YEATS2Q9ULM3 1422 aa21.59■■□□□ 1.05
SNX6-206ENST00000556162 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
SNX6-206ENST00000556162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.59■■□□□ 1.05
SNX6-206ENST00000556162 ABCC5O15440 1437 aa21.58■■□□□ 1.05
SNX6-206ENST00000556162 RTEL1-TNFRSF6BF6WH68 1400 aa21.57■■□□□ 1.04
SNX6-206ENST00000556162 DAPK1P53355 1430 aa21.57■■□□□ 1.04
SNX6-206ENST00000556162 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
SNX6-206ENST00000556162 DNMT1P26358 1616 aaKnown RBP21.54■■□□□ 1.04
SNX6-206ENST00000556162 ATP10AO60312 1499 aa21.54■■□□□ 1.04
SNX6-206ENST00000556162 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
SNX6-206ENST00000556162 C9orf84Q5VXU9 1444 aa21.54■■□□□ 1.04
SNX6-206ENST00000556162 KIDINS220Q9ULH0 1771 aa21.54■■□□□ 1.04
SNX6-206ENST00000556162 ITGAEP38570 1179 aa21.54■■□□□ 1.04
SNX6-206ENST00000556162 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
SNX6-206ENST00000556162 CHIC2Q9UKJ5 165 aa21.52■■□□□ 1.04
SNX6-206ENST00000556162 SHANK2Q9UPX8 1470 aa21.51■■□□□ 1.03
SNX6-206ENST00000556162 ARID4BQ4LE39 1312 aaPredicted RBP21.5■■□□□ 1.03
SNX6-206ENST00000556162 DIP2CQ9Y2E4 1556 aa21.5■■□□□ 1.03
SNX6-206ENST00000556162 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
SNX6-206ENST00000556162 ABCA6Q8N139 1617 aa21.49■■□□□ 1.03
SNX6-206ENST00000556162 CROCC2H7BZ55 1655 aa21.47■■□□□ 1.03
SNX6-206ENST00000556162 ANKRD30AQ9BXX3 1397 aa21.46■■□□□ 1.03
SNX6-206ENST00000556162 RRP7BPQ9NSQ0 103 aa21.46■■□□□ 1.03
SNX6-206ENST00000556162 PTPRKQ15262 1439 aa21.45■■□□□ 1.02
SNX6-206ENST00000556162 A2MP01023 1474 aa21.45■■□□□ 1.02
SNX6-206ENST00000556162 DHX29Q7Z478 1369 aaKnown RBP21.44■■□□□ 1.02
SNX6-206ENST00000556162 REREQ9P2R6 1566 aa21.43■■□□□ 1.02
SNX6-206ENST00000556162 NCOA1Q15788 1441 aa21.43■■□□□ 1.02
SNX6-206ENST00000556162 KIF15Q9NS87 1388 aa21.42■■□□□ 1.02
SNX6-206ENST00000556162 ADGBQ8N7X0 1667 aa21.41■■□□□ 1.02
SNX6-206ENST00000556162 PLXNC1O60486 1568 aa21.41■■□□□ 1.02
SNX6-206ENST00000556162 ADGRL2O95490 1459 aa21.41■■□□□ 1.02
SNX6-206ENST00000556162 ROCK1Q13464 1354 aa21.39■■□□□ 1.02
SNX6-206ENST00000556162 MLECQ14165 292 aa21.39■■□□□ 1.01
SNX6-206ENST00000556162 AGLP35573 1532 aa21.38■■□□□ 1.01
SNX6-206ENST00000556162 DUOX2Q9NRD8 1548 aa21.37■■□□□ 1.01
SNX6-206ENST00000556162 KIF3BO15066 747 aa21.37■■□□□ 1.01
SNX6-206ENST00000556162 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
SNX6-206ENST00000556162 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
SNX6-206ENST00000556162 GGT6Q6P531 493 aa21.33■■□□□ 1.01
SNX6-206ENST00000556162 ERBINQ96RT1 1412 aa21.32■■□□□ 1
SNX6-206ENST00000556162 KDM4FA0A1W2PPD8 638 aa21.3■■□□□ 1
SNX6-206ENST00000556162 ANKRD50Q9ULJ7 1429 aa21.3■■□□□ 1
SNX6-206ENST00000556162 BCORL1Q5H9F3 1711 aa21.3■■□□□ 1
SNX6-206ENST00000556162 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
SNX6-206ENST00000556162 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
SNX6-206ENST00000556162 EIF2AK4Q9P2K8 1649 aaKnown RBP21.26■□□□□ 0.99
SNX6-206ENST00000556162 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
SNX6-206ENST00000556162 NAIPQ13075 1403 aa21.25■□□□□ 0.99
SNX6-206ENST00000556162 ADAMTSL3P82987 1691 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms