RNA–Protein interactions for RNA: ENST00000555743.1

PSMA3-208, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-208ENST00000555743 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
PSMA3-208ENST00000555743 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
PSMA3-208ENST00000555743 CD109Q6YHK3 1445 aa10.13□□□□□ -0.79
PSMA3-208ENST00000555743 ABCA9Q8IUA7 1624 aa10.12□□□□□ -0.79
PSMA3-208ENST00000555743 KDM6BO15054 1643 aa10.11□□□□□ -0.79
PSMA3-208ENST00000555743 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
PSMA3-208ENST00000555743 ARAP3Q8WWN8 1544 aa10.1□□□□□ -0.79
PSMA3-208ENST00000555743 CASKIN1Q8WXD9 1431 aa10.09□□□□□ -0.79
PSMA3-208ENST00000555743 HECW1Q76N89 1606 aa10.09□□□□□ -0.79
PSMA3-208ENST00000555743 NEO1Q92859 1461 aa10.09□□□□□ -0.79
PSMA3-208ENST00000555743 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
PSMA3-208ENST00000555743 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
PSMA3-208ENST00000555743 CLIP1P30622 1438 aa10.07□□□□□ -0.8
PSMA3-208ENST00000555743 CCDC18Q5T9S5 1454 aa10.06□□□□□ -0.8
PSMA3-208ENST00000555743 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
PSMA3-208ENST00000555743 RANGAP1P46060 587 aaPredicted RBP10.05□□□□□ -0.8
PSMA3-208ENST00000555743 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
PSMA3-208ENST00000555743 CDK13Q14004 1512 aaKnown RBP10.04□□□□□ -0.8
PSMA3-208ENST00000555743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.04□□□□□ -0.8
PSMA3-208ENST00000555743 PLCH2O75038 1416 aa10.03□□□□□ -0.8
PSMA3-208ENST00000555743 TROQ12816 1431 aaPredicted RBP10.03□□□□□ -0.8
PSMA3-208ENST00000555743 ARID3CA6NKF2 412 aa10.02□□□□□ -0.81
PSMA3-208ENST00000555743 TSPOAP1O95153 1857 aa10.02□□□□□ -0.81
PSMA3-208ENST00000555743 PCF11O94913 1555 aaKnown RBP10.01□□□□□ -0.81
PSMA3-208ENST00000555743 CEP162Q5TB80 1403 aa10□□□□□ -0.81
PSMA3-208ENST00000555743 FANCAO15360 1455 aa10□□□□□ -0.81
PSMA3-208ENST00000555743 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
PSMA3-208ENST00000555743 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
PSMA3-208ENST00000555743 CFAP74Q9C0B2 1584 aa10□□□□□ -0.81
PSMA3-208ENST00000555743 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
PSMA3-208ENST00000555743 KIF14Q15058 1648 aa9.98□□□□□ -0.81
PSMA3-208ENST00000555743 MAGI2Q86UL8 1455 aa9.98□□□□□ -0.81
PSMA3-208ENST00000555743 ZMYM4Q5VZL5 1548 aa9.97□□□□□ -0.81
PSMA3-208ENST00000555743 FRMPD1Q5SYB0 1578 aa9.97□□□□□ -0.81
PSMA3-208ENST00000555743 KDM4FA0A1W2PPD8 638 aa9.96□□□□□ -0.82
PSMA3-208ENST00000555743 DENND4BO75064 1496 aaPredicted RBP9.96□□□□□ -0.82
PSMA3-208ENST00000555743 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.82
PSMA3-208ENST00000555743 POGZQ7Z3K3 1410 aa9.95□□□□□ -0.82
PSMA3-208ENST00000555743 SPDYE2BA6NHP3 402 aa9.94□□□□□ -0.82
PSMA3-208ENST00000555743 SPDYE6P0CI01 402 aa9.94□□□□□ -0.82
PSMA3-208ENST00000555743 SPDYE2Q495Y8 402 aa9.94□□□□□ -0.82
PSMA3-208ENST00000555743 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
PSMA3-208ENST00000555743 ADGRL1O94910 1474 aa9.93□□□□□ -0.82
PSMA3-208ENST00000555743 RAPGEF3O95398 923 aa9.93□□□□□ -0.82
PSMA3-208ENST00000555743 MAP3K1Q13233 1512 aa9.92□□□□□ -0.82
PSMA3-208ENST00000555743 VPS8Q8N3P4 1428 aa9.92□□□□□ -0.82
PSMA3-208ENST00000555743 ATP1B4Q9UN42 357 aaPredicted RBP9.92□□□□□ -0.82
PSMA3-208ENST00000555743 RICTORQ6R327 1708 aa9.92□□□□□ -0.82
PSMA3-208ENST00000555743 ARHGEF40Q8TER5 1519 aa9.92□□□□□ -0.82
PSMA3-208ENST00000555743 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
PSMA3-208ENST00000555743 SCAPERQ9BY12 1400 aa9.91□□□□□ -0.82
PSMA3-208ENST00000555743 SSUH2Q9Y2M2 353 aa9.91□□□□□ -0.82
PSMA3-208ENST00000555743 KDM5CP41229 1560 aa9.91□□□□□ -0.82
PSMA3-208ENST00000555743 KIAA1107Q9UPP5 1409 aa9.9□□□□□ -0.82
PSMA3-208ENST00000555743 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.82
PSMA3-208ENST00000555743 PREX2Q70Z35 1606 aa9.9□□□□□ -0.82
PSMA3-208ENST00000555743 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
PSMA3-208ENST00000555743 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.82
PSMA3-208ENST00000555743 ARHGAP5Q13017 1502 aa9.89□□□□□ -0.83
PSMA3-208ENST00000555743 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
PSMA3-208ENST00000555743 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
PSMA3-208ENST00000555743 MLH3Q9UHC1 1453 aa9.89□□□□□ -0.83
PSMA3-208ENST00000555743 ABCC1P33527 1531 aa9.88□□□□□ -0.83
PSMA3-208ENST00000555743 LOC105371045A0A1W2PR82 267 aa9.88□□□□□ -0.83
PSMA3-208ENST00000555743 REREQ9P2R6 1566 aa9.88□□□□□ -0.83
PSMA3-208ENST00000555743 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
PSMA3-208ENST00000555743 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
PSMA3-208ENST00000555743 PLEKHH2Q8IVE3 1493 aa9.87□□□□□ -0.83
PSMA3-208ENST00000555743 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
PSMA3-208ENST00000555743 TIAM1Q13009 1591 aa9.86□□□□□ -0.83
PSMA3-208ENST00000555743 CDC42BPBQ9Y5S2 1711 aa9.86□□□□□ -0.83
PSMA3-208ENST00000555743 YEATS2Q9ULM3 1422 aa9.85□□□□□ -0.83
PSMA3-208ENST00000555743 SPDYE4A6NLX3 237 aa9.85□□□□□ -0.83
PSMA3-208ENST00000555743 ATP10AO60312 1499 aa9.85□□□□□ -0.83
PSMA3-208ENST00000555743 ADAMTSL3P82987 1691 aa9.84□□□□□ -0.83
PSMA3-208ENST00000555743 C9orf84Q5VXU9 1444 aa9.84□□□□□ -0.83
PSMA3-208ENST00000555743 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
PSMA3-208ENST00000555743 CCNB3Q8WWL7 1395 aa9.84□□□□□ -0.83
PSMA3-208ENST00000555743 LRRC9Q6ZRR7 1453 aa9.84□□□□□ -0.83
PSMA3-208ENST00000555743 TRAPPC8Q9Y2L5 1435 aa9.83□□□□□ -0.84
PSMA3-208ENST00000555743 CDC42BPAQ5VT25 1732 aa9.83□□□□□ -0.84
PSMA3-208ENST00000555743 SAMD9LQ8IVG5 1584 aa9.83□□□□□ -0.84
PSMA3-208ENST00000555743 HECW2Q9P2P5 1572 aa9.83□□□□□ -0.84
PSMA3-208ENST00000555743 AGLP35573 1532 aa9.82□□□□□ -0.84
PSMA3-208ENST00000555743 AFAP1Q8N556 730 aa9.82□□□□□ -0.84
PSMA3-208ENST00000555743 CFDP1Q9UEE9 299 aaPredicted RBP9.82□□□□□ -0.84
PSMA3-208ENST00000555743 NCOA2Q15596 1464 aa9.82□□□□□ -0.84
PSMA3-208ENST00000555743 MBD5Q9P267 1494 aa9.82□□□□□ -0.84
PSMA3-208ENST00000555743 BCORL1Q5H9F3 1711 aa9.81□□□□□ -0.84
PSMA3-208ENST00000555743 ITSN2Q9NZM3 1697 aa9.8□□□□□ -0.84
PSMA3-208ENST00000555743 DIP2CQ9Y2E4 1556 aa9.8□□□□□ -0.84
PSMA3-208ENST00000555743 PTPRMP28827 1452 aa9.8□□□□□ -0.84
PSMA3-208ENST00000555743 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
PSMA3-208ENST00000555743 RTEL1-TNFRSF6BF6WH68 1400 aa9.8□□□□□ -0.84
PSMA3-208ENST00000555743 SYCP2Q9BX26 1530 aa9.79□□□□□ -0.84
PSMA3-208ENST00000555743 MIA2Q96PC5 1412 aa9.79□□□□□ -0.84
PSMA3-208ENST00000555743 SUPT6HQ7KZ85 1726 aaKnown RBP9.79□□□□□ -0.84
PSMA3-208ENST00000555743 INO80Q9ULG1 1556 aaPredicted RBP9.78□□□□□ -0.84
PSMA3-208ENST00000555743 SIGLEC1Q9BZZ2 1709 aa9.78□□□□□ -0.84
PSMA3-208ENST00000555743 PLXNC1O60486 1568 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms