RNA–Protein interactions for RNA: ENST00000555743.1

PSMA3-208, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-208ENST00000555743 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
PSMA3-208ENST00000555743 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
PSMA3-208ENST00000555743 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
PSMA3-208ENST00000555743 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
PSMA3-208ENST00000555743 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
PSMA3-208ENST00000555743 FOXD1Q16676 465 aa14.14□□□□□ -0.15
PSMA3-208ENST00000555743 PLPPR3Q6T4P5 718 aa13.97□□□□□ -0.17
PSMA3-208ENST00000555743 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
PSMA3-208ENST00000555743 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
PSMA3-208ENST00000555743 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
PSMA3-208ENST00000555743 ADRA2BP18089 450 aa13.51□□□□□ -0.25
PSMA3-208ENST00000555743 ABCC9O60706 1549 aa13.3□□□□□ -0.28
PSMA3-208ENST00000555743 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
PSMA3-208ENST00000555743 MSH5O43196 834 aa12.97□□□□□ -0.33
PSMA3-208ENST00000555743 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
PSMA3-208ENST00000555743 NACADO15069 1562 aa12.86□□□□□ -0.35
PSMA3-208ENST00000555743 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
PSMA3-208ENST00000555743 DCAF1Q9Y4B6 1507 aa12.76□□□□□ -0.37
PSMA3-208ENST00000555743 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
PSMA3-208ENST00000555743 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
PSMA3-208ENST00000555743 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
PSMA3-208ENST00000555743 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
PSMA3-208ENST00000555743 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
PSMA3-208ENST00000555743 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
PSMA3-208ENST00000555743 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
PSMA3-208ENST00000555743 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
PSMA3-208ENST00000555743 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
PSMA3-208ENST00000555743 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
PSMA3-208ENST00000555743 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
PSMA3-208ENST00000555743 EIF4G1Q04637 1599 aaKnown RBP12.13□□□□□ -0.47
PSMA3-208ENST00000555743 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
PSMA3-208ENST00000555743 CC2D2AQ9P2K1 1620 aa12.07□□□□□ -0.48
PSMA3-208ENST00000555743 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
PSMA3-208ENST00000555743 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
PSMA3-208ENST00000555743 KCNA4P22459 653 aa11.97□□□□□ -0.49
PSMA3-208ENST00000555743 NCAPD3P42695 1498 aa11.9□□□□□ -0.5
PSMA3-208ENST00000555743 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
PSMA3-208ENST00000555743 BAZ1AQ9NRL2 1556 aaPredicted RBP11.87□□□□□ -0.51
PSMA3-208ENST00000555743 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
PSMA3-208ENST00000555743 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
PSMA3-208ENST00000555743 ATAD2BQ9ULI0 1458 aa11.84□□□□□ -0.51
PSMA3-208ENST00000555743 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
PSMA3-208ENST00000555743 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
PSMA3-208ENST00000555743 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
PSMA3-208ENST00000555743 HOXD11P31277 338 aaPredicted RBP11.81□□□□□ -0.52
PSMA3-208ENST00000555743 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
PSMA3-208ENST00000555743 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
PSMA3-208ENST00000555743 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
PSMA3-208ENST00000555743 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
PSMA3-208ENST00000555743 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
PSMA3-208ENST00000555743 WIZO95785 1651 aa11.55□□□□□ -0.56
PSMA3-208ENST00000555743 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
PSMA3-208ENST00000555743 TOP2AP11388 1531 aaKnown RBP11.51□□□□□ -0.57
PSMA3-208ENST00000555743 CADPSQ9ULU8 1353 aa11.51□□□□□ -0.57
PSMA3-208ENST00000555743 CUX2O14529 1486 aa11.51□□□□□ -0.57
PSMA3-208ENST00000555743 NESP48681 1621 aa11.49□□□□□ -0.57
PSMA3-208ENST00000555743 PDS5BQ9NTI5 1447 aa11.48□□□□□ -0.57
PSMA3-208ENST00000555743 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
PSMA3-208ENST00000555743 CFTRP13569 1480 aa11.45□□□□□ -0.58
PSMA3-208ENST00000555743 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
PSMA3-208ENST00000555743 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
PSMA3-208ENST00000555743 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
PSMA3-208ENST00000555743 MRC2Q9UBG0 1479 aa11.34□□□□□ -0.59
PSMA3-208ENST00000555743 WDR62O43379 1518 aa11.34□□□□□ -0.59
PSMA3-208ENST00000555743 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.6
PSMA3-208ENST00000555743 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
PSMA3-208ENST00000555743 KIF21AQ7Z4S6 1674 aa11.32□□□□□ -0.6
PSMA3-208ENST00000555743 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
PSMA3-208ENST00000555743 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
PSMA3-208ENST00000555743 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
PSMA3-208ENST00000555743 PRDM2Q13029 1718 aa11.22□□□□□ -0.61
PSMA3-208ENST00000555743 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.61
PSMA3-208ENST00000555743 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
PSMA3-208ENST00000555743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.19□□□□□ -0.62
PSMA3-208ENST00000555743 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
PSMA3-208ENST00000555743 TOPBP1Q92547 1522 aa11.14□□□□□ -0.63
PSMA3-208ENST00000555743 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
PSMA3-208ENST00000555743 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
PSMA3-208ENST00000555743 SUPT5HO00267 1087 aaKnown RBP11.08□□□□□ -0.64
PSMA3-208ENST00000555743 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
PSMA3-208ENST00000555743 ZBTB22O15209 634 aa11.07□□□□□ -0.64
PSMA3-208ENST00000555743 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
PSMA3-208ENST00000555743 TARBP1Q13395 1621 aaKnown RBP11.04□□□□□ -0.64
PSMA3-208ENST00000555743 WDR97A6NE52 1622 aa11.03□□□□□ -0.64
PSMA3-208ENST00000555743 CUX1P39880 1505 aa11.03□□□□□ -0.64
PSMA3-208ENST00000555743 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
PSMA3-208ENST00000555743 SOGA1O94964 1423 aa10.99□□□□□ -0.65
PSMA3-208ENST00000555743 FGD5Q6ZNL6 1462 aa10.99□□□□□ -0.65
PSMA3-208ENST00000555743 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
PSMA3-208ENST00000555743 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
PSMA3-208ENST00000555743 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
PSMA3-208ENST00000555743 RAD54L2Q9Y4B4 1467 aa10.95□□□□□ -0.66
PSMA3-208ENST00000555743 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
PSMA3-208ENST00000555743 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
PSMA3-208ENST00000555743 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.661e-10■■■■■ 54.7
PSMA3-208ENST00000555743 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
PSMA3-208ENST00000555743 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
PSMA3-208ENST00000555743 BIVM-ERCC5R4GMW8 1640 aa10.91□□□□□ -0.66
PSMA3-208ENST00000555743 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
PSMA3-208ENST00000555743 GRIN2BQ13224 1484 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms