RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
LINC00641-201ENST00000555379 CFTRP13569 1480 aa10.88□□□□□ -0.67
LINC00641-201ENST00000555379 BECN1Q14457 450 aa10.88□□□□□ -0.67
LINC00641-201ENST00000555379 FAM9BQ8IZU0 186 aa10.88□□□□□ -0.67
LINC00641-201ENST00000555379 ERICH3Q5RHP9 1530 aa10.87□□□□□ -0.67
LINC00641-201ENST00000555379 PHLDB1Q86UU1 1377 aa10.86□□□□□ -0.67
LINC00641-201ENST00000555379 CCDC136Q96JN2 1154 aa10.86□□□□□ -0.67
LINC00641-201ENST00000555379 LMOD3Q0VAK6 560 aa10.86□□□□□ -0.67
LINC00641-201ENST00000555379 NUP155O75694 1391 aa10.86□□□□□ -0.67
LINC00641-201ENST00000555379 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
LINC00641-201ENST00000555379 TMX4Q9H1E5 349 aaPredicted RBP10.85□□□□□ -0.67
LINC00641-201ENST00000555379 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
LINC00641-201ENST00000555379 GGT6Q6P531 493 aa10.85□□□□□ -0.67
LINC00641-201ENST00000555379 PKNOX2Q96KN3 472 aa10.85□□□□□ -0.67
LINC00641-201ENST00000555379 WASHC2CQ9Y4E1 1318 aa10.85□□□□□ -0.67
LINC00641-201ENST00000555379 A0A0G2JS52 829 aa10.85□□□□□ -0.67
LINC00641-201ENST00000555379 NAP1L5Q96NT1 182 aaPredicted RBP10.85□□□□□ -0.67
LINC00641-201ENST00000555379 SYNJ2O15056 1496 aa10.84□□□□□ -0.67
LINC00641-201ENST00000555379 PTMSP20962 102 aa10.84□□□□□ -0.67
LINC00641-201ENST00000555379 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
LINC00641-201ENST00000555379 SRPK2P78362 688 aaKnown RBP10.84□□□□□ -0.67
LINC00641-201ENST00000555379 POGZQ7Z3K3 1410 aa10.83□□□□□ -0.68
LINC00641-201ENST00000555379 NPHP1O15259 732 aa10.83□□□□□ -0.68
LINC00641-201ENST00000555379 RALBP1Q15311 655 aa10.83□□□□□ -0.68
LINC00641-201ENST00000555379 RTF1Q92541 710 aaKnown RBP10.83□□□□□ -0.68
LINC00641-201ENST00000555379 GOLGA6L22H0YM25 854 aa10.83□□□□□ -0.68
LINC00641-201ENST00000555379 FTSJ3Q8IY81 847 aaKnown RBP10.83□□□□□ -0.68
LINC00641-201ENST00000555379 NGEFQ8N5V2 710 aa10.83□□□□□ -0.68
LINC00641-201ENST00000555379 KTN1Q86UP2 1357 aaKnown RBP10.82□□□□□ -0.68
LINC00641-201ENST00000555379 KIF3BO15066 747 aa10.81□□□□□ -0.68
LINC00641-201ENST00000555379 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
LINC00641-201ENST00000555379 KIF21BO75037 1637 aa10.81□□□□□ -0.68
LINC00641-201ENST00000555379 PKD2Q13563 968 aa10.81□□□□□ -0.68
LINC00641-201ENST00000555379 FOXD1Q16676 465 aa10.81□□□□□ -0.68
LINC00641-201ENST00000555379 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
LINC00641-201ENST00000555379 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
LINC00641-201ENST00000555379 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
LINC00641-201ENST00000555379 LMOD2Q6P5Q4 547 aa10.8□□□□□ -0.68
LINC00641-201ENST00000555379 SCAPERQ9BY12 1400 aa10.8□□□□□ -0.68
LINC00641-201ENST00000555379 CCER2I3L3R5 266 aa10.8□□□□□ -0.68
LINC00641-201ENST00000555379 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
LINC00641-201ENST00000555379 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
LINC00641-201ENST00000555379 MLECQ14165 292 aa10.79□□□□□ -0.68
LINC00641-201ENST00000555379 FYCO1Q9BQS8 1478 aa10.78□□□□□ -0.68
LINC00641-201ENST00000555379 FHOD3Q2V2M9 1422 aa10.78□□□□□ -0.68
LINC00641-201ENST00000555379 WWC1Q8IX03 1113 aa10.78□□□□□ -0.68
LINC00641-201ENST00000555379 DEKP35659 375 aaKnown RBP10.78□□□□□ -0.68
LINC00641-201ENST00000555379 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
LINC00641-201ENST00000555379 WASHC2AQ641Q2 1341 aa10.77□□□□□ -0.68
LINC00641-201ENST00000555379 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
LINC00641-201ENST00000555379 ZRSR1Q15695 479 aaKnown RBP10.75□□□□□ -0.69
LINC00641-201ENST00000555379 CHMP4CQ96CF2 233 aa10.75□□□□□ -0.69
LINC00641-201ENST00000555379 CASKIN1Q8WXD9 1431 aa10.75□□□□□ -0.69
LINC00641-201ENST00000555379 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
LINC00641-201ENST00000555379 IGF1RP08069 1367 aa10.74□□□□□ -0.69
LINC00641-201ENST00000555379 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
LINC00641-201ENST00000555379 MCCP23508 829 aa10.74□□□□□ -0.69
LINC00641-201ENST00000555379 PPM1GO15355 546 aaPredicted RBP10.73□□□□□ -0.69
LINC00641-201ENST00000555379 FKBP8Q14318 412 aa10.73□□□□□ -0.69
LINC00641-201ENST00000555379 CSB-PGBD3P0DP91 1061 aa10.72□□□□□ -0.69
LINC00641-201ENST00000555379 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
LINC00641-201ENST00000555379 EVC2Q86UK5 1308 aa10.72□□□□□ -0.69
LINC00641-201ENST00000555379 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
LINC00641-201ENST00000555379 CUL7Q14999 1698 aa10.72□□□□□ -0.69
LINC00641-201ENST00000555379 MIA2Q96PC5 1412 aa10.71□□□□□ -0.69
LINC00641-201ENST00000555379 OS9Q13438 667 aaPredicted RBP10.71□□□□□ -0.69
LINC00641-201ENST00000555379 EHBP1L1Q8N3D4 1523 aa10.71□□□□□ -0.7
LINC00641-201ENST00000555379 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.7
LINC00641-201ENST00000555379 TOPBP1Q92547 1522 aa10.71□□□□□ -0.7
LINC00641-201ENST00000555379 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
LINC00641-201ENST00000555379 PDE3BQ13370 1112 aa10.7□□□□□ -0.7
LINC00641-201ENST00000555379 TOP2BQ02880 1626 aa10.7□□□□□ -0.7
LINC00641-201ENST00000555379 NGDNQ8NEJ9 315 aaKnown RBP10.69□□□□□ -0.7
LINC00641-201ENST00000555379 CGNL1Q0VF96 1302 aa10.69□□□□□ -0.7
LINC00641-201ENST00000555379 VSIG10Q8N0Z9 540 aa10.69□□□□□ -0.7
LINC00641-201ENST00000555379 STK31Q9BXU1 1019 aa10.69□□□□□ -0.7
LINC00641-201ENST00000555379 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 ARXQ96QS3 562 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 FAM69CQ0P6D2 419 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 RAB3GAP2Q9H2M9 1393 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 NRDCO43847 1150 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 KIAA0586Q9BVV6 1533 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
LINC00641-201ENST00000555379 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
LINC00641-201ENST00000555379 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
LINC00641-201ENST00000555379 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
LINC00641-201ENST00000555379 HMMRO75330 724 aa10.67□□□□□ -0.7
LINC00641-201ENST00000555379 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
LINC00641-201ENST00000555379 HNRNPMP52272 730 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC00641-201ENST00000555379 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
LINC00641-201ENST00000555379 PRG4Q92954 1404 aaPredicted RBP10.66□□□□□ -0.7
LINC00641-201ENST00000555379 LRRFIP1Q32MZ4 808 aaKnown RBP10.66□□□□□ -0.7
LINC00641-201ENST00000555379 ARHGAP5Q13017 1502 aa10.65□□□□□ -0.7
LINC00641-201ENST00000555379 HSP90B1P14625 803 aaKnown RBP10.65□□□□□ -0.7
LINC00641-201ENST00000555379 HTATSF1O43719 755 aaKnown RBP10.65□□□□□ -0.7
LINC00641-201ENST00000555379 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
LINC00641-201ENST00000555379 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.71
LINC00641-201ENST00000555379 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms